Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00074 ATGGCTTCTTCTCCTGAGACTGCTCCGTCGCCGGACTCTTCTTCTTCCCAGGAATCCCCGCCACCTCCTCCTAATGACTCAGCCGCGTCACCCCCTCCTCCGCCTCCGCCATCTTCCTCCAAATCACCTCCCCCACCGCCGCAAGACGACTCCGTTTCTCCGCCAGCACCGCCTCCTCCTCCTCCTCCGACTTCATCTTCTTCGTCCTCCAAAACAATATCTCCTCCTCCTCCTCCACCGCCGCCGACATCATCCGAGGCATCCAGTTCTTCCTCGTCTTCAAATAATAACCTACCAGTTATAATCGGAGTAGCAGCCGGAGTTGGTCTTTTGATAATCGCCGTACTCATAATCTTCGCAATATGCTCGAGGAGAAAGAGAAAGCGAGAGGAAGCGGAATATTACGGAGACTCCATCGAAGGTCGCAAAAATGGCGATTATTACAACAATTCGCAACCAAATTGGCATGGAGGGGACCATTTTAACAGGCCAACGCCCCTGCCCGGTGCGAGTGAGTCAATGGGAGGCCCATGGCCCGCACCTCCACCGCCTCCTCCTATGGGGGTGAGCGGAGAATCGAGCTCGAACTTCTCCGGCCCAAGGCAAATGCCGCTTCCCCCGCCTTCACCAAACCTCGCGCTGGGGTTCAATAAGAGCACATTCACGTACGACGAGCTGGCGGCGGCGACCGGCGGGTTTGCACAGGCGAATCTGCTCGGGCAAGGTGGATTTGGGTACGTCCATAAGGGTGTTCTTCCGAACGGCAAAGAAATCGCCGTGAAAAGCCTCAAGACAGGGAGTGGACAAGGAGAGAGAGAATTCCAGGCGGAAGTTGAAATTATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCAGGTGGACAGAGGATGTTGGTTTATGAATTTGTCCCTAACAAGACATTGGAACATCACCTCCATTCTAAGAATCTTGCTACCATGGACTTGCCCACCAGGCTACGTATTGCTATTGGATCTGCAAAAGGGCTTGCTTATCTTCACGAGGACTGCCATCCTCGGATTATACATCGCGATATAAAATCTGCAAATATTCTCCTCGACTTCAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCAAAGCTCTCTTCCGACAACTACACTCACGTCTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCGGCAAGCGGCAAATTGACTGAGAAATCGGATGTATTCTCATTTGGGGTTATGCTGTTGGAGCTCATAACTGGAAAAAAACCAGTGGATCCAAGTAATGCAATGGAGGATAGCTTAGTTGACTGGGCTCGACCGCTTTTAAGCCGAGCACTTGAGGATGGGAACTACGATGGGCTGGTCGATATTCGCTTGGAAAATAACTTCAACCCTCAAGAGATGGCAAGATTGATCGCTTGTGCTGCAGCTAGCATTCGCCATTCTGCTCGAAAGCGCCCAAGAATGAGCCAGATCGTGCGGGCATTGGAAGGGGCCGTGTCGTTGGACGACTTGAAAGACGGGGGTGTGAGAGCAGGGGAGAGCTTGGTGGTCACCTCGAACGAAAGCTCATTGGACTACGATACCAAGGCATACAATGCAGACATGAAGAAGTTTAGGCAGATGGCCCTCTCCAGCCAGGAGTTTGCAAGCAGTGAGCATGGAACTTCCAGCAGTGACTCAGGCAACCAAAAACAGTACCTTTGA 1734 51.79 MASSPETAPSPDSSSSQESPPPPPNDSAASPPPPPPPSSSKSPPPPPQDDSVSPPAPPPPPPPTSSSSSSKTISPPPPPPPPTSSEASSSSSSSNNNLPVIIGVAAGVGLLIIAVLIIFAICSRRKRKREEAEYYGDSIEGRKNGDYYNNSQPNWHGGDHFNRPTPLPGASESMGGPWPAPPPPPPMGVSGESSSNFSGPRQMPLPPPSPNLALGFNKSTFTYDELAAATGGFAQANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHSKNLATMDLPTRLRIAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDFNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELITGKKPVDPSNAMEDSLVDWARPLLSRALEDGNYDGLVDIRLENNFNPQEMARLIACAAASIRHSARKRPRMSQIVRALEGAVSLDDLKDGGVRAGESLVVTSNESSLDYDTKAYNADMKKFRQMALSSQEFASSEHGTSSSDSGNQKQYL 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1824425 1827095 + Bma028759.1 Bma09g00074 88120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00074 577 MobiDBLite consensus disorder prediction 144 158 - -
Bma09g00074 577 MobiDBLite consensus disorder prediction 15 85 - -
Bma09g00074 577 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 12 569 - -
Bma09g00074 577 MobiDBLite consensus disorder prediction 1 95 - -
Bma09g00074 577 ProSitePatterns Protein kinases ATP-binding region signature. 239 261 IPR017441 GO:0005524
Bma09g00074 577 MobiDBLite consensus disorder prediction 557 577 - -
Bma09g00074 577 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 569 - -
Bma09g00074 577 ProSiteProfiles Protein kinase domain profile. 233 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00074 577 SUPERFAMILY Protein kinase-like (PK-like) 208 505 IPR011009 -
Bma09g00074 577 MobiDBLite consensus disorder prediction 139 208 - -
Bma09g00074 577 Gene3D Transferase(Phosphotransferase) domain 1 309 517 - -
Bma09g00074 577 SMART serkin_6 233 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00074 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Bma09g00074 577 MobiDBLite consensus disorder prediction 175 189 - -
Bma09g00074 577 CDD STKc_IRAK 239 507 - -
Bma09g00074 577 Pfam Protein tyrosine and serine/threonine kinase 237 443 IPR001245 GO:0004672|GO:0006468
Bma09g00074 577 Gene3D Phosphorylase Kinase; domain 1 211 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00491 Bma-Chr7:5987505 Bma09g00074 Bma-Chr9:1824425 0 dispersed
Bma09g00074 Bma-Chr9:1824425 Bma11g00518 Bma-Chr11:6483183 0 dispersed
Bma15g01003 Bma-Chr15:38971692 Bma09g00074 Bma-Chr9:1824425 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66687 PF07714 PK_Tyr_Ser-Thr 1.30E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00074 - - rcu:8273399 686.411