Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00074 | ATGGCTTCTTCTCCTGAGACTGCTCCGTCGCCGGACTCTTCTTCTTCCCAGGAATCCCCGCCACCTCCTCCTAATGACTCAGCCGCGTCACCCCCTCCTCCGCCTCCGCCATCTTCCTCCAAATCACCTCCCCCACCGCCGCAAGACGACTCCGTTTCTCCGCCAGCACCGCCTCCTCCTCCTCCTCCGACTTCATCTTCTTCGTCCTCCAAAACAATATCTCCTCCTCCTCCTCCACCGCCGCCGACATCATCCGAGGCATCCAGTTCTTCCTCGTCTTCAAATAATAACCTACCAGTTATAATCGGAGTAGCAGCCGGAGTTGGTCTTTTGATAATCGCCGTACTCATAATCTTCGCAATATGCTCGAGGAGAAAGAGAAAGCGAGAGGAAGCGGAATATTACGGAGACTCCATCGAAGGTCGCAAAAATGGCGATTATTACAACAATTCGCAACCAAATTGGCATGGAGGGGACCATTTTAACAGGCCAACGCCCCTGCCCGGTGCGAGTGAGTCAATGGGAGGCCCATGGCCCGCACCTCCACCGCCTCCTCCTATGGGGGTGAGCGGAGAATCGAGCTCGAACTTCTCCGGCCCAAGGCAAATGCCGCTTCCCCCGCCTTCACCAAACCTCGCGCTGGGGTTCAATAAGAGCACATTCACGTACGACGAGCTGGCGGCGGCGACCGGCGGGTTTGCACAGGCGAATCTGCTCGGGCAAGGTGGATTTGGGTACGTCCATAAGGGTGTTCTTCCGAACGGCAAAGAAATCGCCGTGAAAAGCCTCAAGACAGGGAGTGGACAAGGAGAGAGAGAATTCCAGGCGGAAGTTGAAATTATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCAGGTGGACAGAGGATGTTGGTTTATGAATTTGTCCCTAACAAGACATTGGAACATCACCTCCATTCTAAGAATCTTGCTACCATGGACTTGCCCACCAGGCTACGTATTGCTATTGGATCTGCAAAAGGGCTTGCTTATCTTCACGAGGACTGCCATCCTCGGATTATACATCGCGATATAAAATCTGCAAATATTCTCCTCGACTTCAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCAAAGCTCTCTTCCGACAACTACACTCACGTCTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCGGCAAGCGGCAAATTGACTGAGAAATCGGATGTATTCTCATTTGGGGTTATGCTGTTGGAGCTCATAACTGGAAAAAAACCAGTGGATCCAAGTAATGCAATGGAGGATAGCTTAGTTGACTGGGCTCGACCGCTTTTAAGCCGAGCACTTGAGGATGGGAACTACGATGGGCTGGTCGATATTCGCTTGGAAAATAACTTCAACCCTCAAGAGATGGCAAGATTGATCGCTTGTGCTGCAGCTAGCATTCGCCATTCTGCTCGAAAGCGCCCAAGAATGAGCCAGATCGTGCGGGCATTGGAAGGGGCCGTGTCGTTGGACGACTTGAAAGACGGGGGTGTGAGAGCAGGGGAGAGCTTGGTGGTCACCTCGAACGAAAGCTCATTGGACTACGATACCAAGGCATACAATGCAGACATGAAGAAGTTTAGGCAGATGGCCCTCTCCAGCCAGGAGTTTGCAAGCAGTGAGCATGGAACTTCCAGCAGTGACTCAGGCAACCAAAAACAGTACCTTTGA | 1734 | 51.79 | MASSPETAPSPDSSSSQESPPPPPNDSAASPPPPPPPSSSKSPPPPPQDDSVSPPAPPPPPPPTSSSSSSKTISPPPPPPPPTSSEASSSSSSSNNNLPVIIGVAAGVGLLIIAVLIIFAICSRRKRKREEAEYYGDSIEGRKNGDYYNNSQPNWHGGDHFNRPTPLPGASESMGGPWPAPPPPPPMGVSGESSSNFSGPRQMPLPPPSPNLALGFNKSTFTYDELAAATGGFAQANLLGQGGFGYVHKGVLPNGKEIAVKSLKTGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHSKNLATMDLPTRLRIAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDFNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYAASGKLTEKSDVFSFGVMLLELITGKKPVDPSNAMEDSLVDWARPLLSRALEDGNYDGLVDIRLENNFNPQEMARLIACAAASIRHSARKRPRMSQIVRALEGAVSLDDLKDGGVRAGESLVVTSNESSLDYDTKAYNADMKKFRQMALSSQEFASSEHGTSSSDSGNQKQYL | 577 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1824425 | 1827095 | + | Bma028759.1 | Bma09g00074 | 88120 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 144 | 158 | - | - | |
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 15 | 85 | - | - | |
Bma09g00074 | 577 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 | 12 | 569 | - | - | |
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Bma09g00074 | 577 | ProSitePatterns | Protein kinases ATP-binding region signature. | 239 | 261 | IPR017441 | GO:0005524 | |
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 557 | 577 | - | - | |
Bma09g00074 | 577 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 12 | 569 | - | - | |
Bma09g00074 | 577 | ProSiteProfiles | Protein kinase domain profile. | 233 | 509 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00074 | 577 | SUPERFAMILY | Protein kinase-like (PK-like) | 208 | 505 | IPR011009 | - | |
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 139 | 208 | - | - | |
Bma09g00074 | 577 | Gene3D | Transferase(Phosphotransferase) domain 1 | 309 | 517 | - | - | |
Bma09g00074 | 577 | SMART | serkin_6 | 233 | 509 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00074 | 577 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 353 | 365 | IPR008271 | GO:0004672|GO:0006468 | |
Bma09g00074 | 577 | MobiDBLite | consensus disorder prediction | 175 | 189 | - | - | |
Bma09g00074 | 577 | CDD | STKc_IRAK | 239 | 507 | - | - | |
Bma09g00074 | 577 | Pfam | Protein tyrosine and serine/threonine kinase | 237 | 443 | IPR001245 | GO:0004672|GO:0006468 | |
Bma09g00074 | 577 | Gene3D | Phosphorylase Kinase; domain 1 | 211 | 308 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00491 | Bma-Chr7:5987505 | Bma09g00074 | Bma-Chr9:1824425 | 0 | dispersed | |
Bma09g00074 | Bma-Chr9:1824425 | Bma11g00518 | Bma-Chr11:6483183 | 0 | dispersed | |
Bma15g01003 | Bma-Chr15:38971692 | Bma09g00074 | Bma-Chr9:1824425 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66687 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-45 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00074 | - | - | rcu:8273399 | 686.411 |