Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00093 ATGGAGTTTTGGGTCTGGGTAAGTGCTGTAACTGTGGTAGGGTTTCTATGGTGGAAGAAGATGAAGAAGGAGACGGAGAAGAAGAATCAGGGAGTTCCCAGAGGGAACTTGGGATGGCCTCTGGTTGGAGAAACCCTAGATTTCATTGCTTCTGGCTCTACTTCTCGACCTGTCATCTTCATGGAAAAACGAAAATCTCTATATGGGGCAGTGTTCAAAACTCATATTCTAGGAACACCCATCATAGTTTCAACAGATCCAGACGTGAACAAAGTGGTTCTGCAGAATCATGGCAATGTTTTCATCCCTGCATATCCAAAATCAGTTCGAGAATTACTAGGAAAGTATTCGATTCTTCAAACCAACGGAAATCTCCATAAAAAACTGCACGCTTTGATCGGAGGGTTCCTCCGATCTCCCCAGCTTAAAACCAGAATCACCAGAGATATTGAGGACTCTGTGAAGCTCACCCTGGCTGAGTGGAAGAAGATGAACCTTATTCTGGTTCAAAACGAAACCAGAAAGATCACTTTTAAAGTTTTGGTAAAGGTGTTGATGAGCGTGGGCCCGGGAGAAGATTTGGAGTTCTTGAAAAAAGAATTTGAAGAATTCATTAAAGGCTTAATCTGTTTACCCGTTAAGCTTCCAGGAACACAGTTATACAAATCTCTCAAGGCTAAGGATAAGTTATTGAAGTTTGTAAGAAAACTAGTGGAAGAAAGAAGATCGACCATGGAGGATGACTGTGGAAAGGTTGCAGTAAATGATGCGGTCGACGTGCTCCTGAATGACAACGGGGAGTCATACGACACTCAACGGCTACCGTCGGATTTGATTAGTAACAACATCATTGAGATGATGATCCCCGGCGAGGAAACGGTCCCAATGGCAATGACCCTCGCCGTGAAATTTCTAGCTGACAATCCCGATGCTCTCGAAAAACTAATGGAGGAGAACATGGAGTTGAAGAAGAAGAAGGCTGAGACTGATGATTTGTATGGATGGTCTGACTACATGTTCTTACCATTTACTCAAAATGTGATCAGTGAGACTCTGAGAATGGCAAATATCATCAATGGGGTTTGGAGGAAAGCTCTGAAAGATGTTCATATCAAGAATTATTTGATACCGGAGGGATGGTGCGTTTTGACATCGTTTTCATCGGTTCACATGGATGAAGAGAAATATTCAAACCCATATCATTTTGATCCATGGAGATGGGAGAAAATAGGAGCAACGGCTAATAACAATAACTTTACACCATTCGGCGGTGGGCAGAGGCTGTGCCCAGGTTTAGAATTGTCCAGGCTTGAAATTGCAATCTTCCTCCACCATCTTGTCACGACTTACAGATGGGCGGCTGAGGAAGATGAAATAATCTACTTTCCGACGGTGAAGATGAAGAGGAAGCTCCCCATTACAGTCACACCCATTATCTCTTGA 1443 43.24 MEFWVWVSAVTVVGFLWWKKMKKETEKKNQGVPRGNLGWPLVGETLDFIASGSTSRPVIFMEKRKSLYGAVFKTHILGTPIIVSTDPDVNKVVLQNHGNVFIPAYPKSVRELLGKYSILQTNGNLHKKLHALIGGFLRSPQLKTRITRDIEDSVKLTLAEWKKMNLILVQNETRKITFKVLVKVLMSVGPGEDLEFLKKEFEEFIKGLICLPVKLPGTQLYKSLKAKDKLLKFVRKLVEERRSTMEDDCGKVAVNDAVDVLLNDNGESYDTQRLPSDLISNNIIEMMIPGEETVPMAMTLAVKFLADNPDALEKLMEENMELKKKKAETDDLYGWSDYMFLPFTQNVISETLRMANIINGVWRKALKDVHIKNYLIPEGWCVLTSFSSVHMDEEKYSNPYHFDPWRWEKIGATANNNNFTPFGGGQRLCPGLELSRLEIAIFLHHLVTTYRWAAEEDEIIYFPTVKMKRKLPITVTPIIS 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2502689 2507454 + Bma028785.1 Bma09g00093 88139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00093 480 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS P450 superfamily signature 138 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PANTHER CYTOCHROME P450 26 9 475 - -
Bma09g00093 480 Pfam Cytochrome P450 33 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 Gene3D Cytochrome P450 21 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Bma09g00093 480 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 9 475 - -
Bma09g00093 480 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00093 480 Coils Coil 312 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00754 Bma-Chr1:6956800 Bma09g00093 Bma-Chr9:2502689 2.84E-56 dispersed
Bma03g00256 Bma-Chr3:1966144 Bma09g00093 Bma-Chr9:2502689 1.58E-125 dispersed
Bma03g00991 Bma-Chr3:10712519 Bma09g00093 Bma-Chr9:2502689 1.51E-114 dispersed
Bma09g00093 Bma-Chr9:2502689 Bma14g01389 Bma-Chr14:26043652 9.88E-102 dispersed
Bma09g00093 Bma-Chr9:2502689 Bma06g00127 Bma-Chr6:1710317 3.25E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00093 K12637 - tcc:18610843 697.967