Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00142 | ATGTTCAAGTTCCAGGAGCTCATTCGCCGAGATATCGGTAAGATTGCAACGAATATTGCCATGGAACAGGGTAAGGCATTGAAGGGTGCCCAAAGTGATGTTCTTCAGGGTTTAGAGGTGATTGAACGTGCTTGTAGAGTTGCAACTTCCCAAATGGGGGAGTTCATTCCTAATTCATCTAATGGAATTGACGTGTACCACATTAGAGAGCCACTTGGTGTTTGTGCGGGAATATGCGCTTCTAATTATCCAGAAACATTCTCCTTATGGATGTTTCCTACAGCAGTTACATGTGGCAATACATTTATTCTCAAGTCTTCGGAAAGAAACCCTGGAGCTTCATTGATGATTGCAGAACTGGCAATGGAGGCTGGCCTGCCTGATGGTGTCCTAAACATTATACATGGAACCCATAATATTGTTAATTACATCTGTGATGATGAGGAAATAAAAGCCATATCTTTTGTTGGTACAATTGCTAAGGATGAAATGGACATATATGTAAGGGCAGCTGCTAGTGGGAAGCGGGTCCAGTCCTATAGAGGAAGCAAAAATTATTCAATTATCATGCCTGATGCTAGCATGGATGCCTGTTTGGACACTCTTATTGCTTCCGGCTTTAGTGTTGTGGGGCAGAGATGCATGGCTCTCAGCATTGTTGTTTTTGTTGGAGGTTCAATTACATGGTTAGAAGAACTTGTGGAACGGGCCAAATTACTAAAGGTAACTGTGGGTACAGATCACAATGCTGACCTTGGTCCAGTAAATTCTGCAGAGGCAAGGGATCAGATATGCAGATTAATCCAAAATGCCATTGAAAGCGGTGCTACGCTTATGCTTGATGGGAGAGATATTGTGGTTCCAGGCTATGAAAAGGGAAACTTTATTGGACCTACCATATTATCTGATGTTACATCCACTAGAGAGTTCTATAAGGAAGAAATTTATGGACCTGTTCTCCTTTGTATGAAGACTGAAAACCTCGAGGAGGCTATAGCCACTGTGAACAGAAGCAACAATGGAGTTACAGCTTCCATATTCACCACCGCAGGCGCTGCAGCAAGGAAGTTCCAGAACGAAGTTGAAGCTGGAGTGGTTGGAGTCAATGTCCCCGTCACCTGGTCATTTCCCTTCTTTAATGGCTCAAATGCTCTTTGTAGTGGAGGAGACTCTCAATTTTATGGTAAATCTTGTCTAGAATTTTACACCCAAGTGAAGACTGTAGTACAACAGTGGAAGGATTTTCCAAGCGATGGAGCCTCGATTTGTGGTCCGTCTTCGTCCAAGGCAGATGCAAGAAGTCTACACATATCTTCAGGATTACCTTCAACATCCAGAAGAGAACTGCATTTACAAAGAACTTCATTAACAATATCTCCTGAATCAGAGATGGATCCTACCATCCGGATAATGCCTCCAATTTCTTCTGCATCGGACACTGATTTATCGAACTCTGGAGCATCTTCTGAGTCTCCTATTGTTTTGCCTTTACAATCGGAAAATGATCATTCAAATCGGAATATCTCTCCTACAATTCAGAGGCATGAAACTATATCCCATGTTTTAGAGGGGATTAATCTACCCCCGTCTCGAAAAACAGATTTGGAGGGATTACTTGGTTCCAAATCTCACGACAAAGTTTGTTCAACAAACTCACAGGCCAATAGATTGGCTCCTTTTATGGCTGAAGTACCTCATTTGAGTGACTCTTGCTTATTCTCTCCTCCAGATGGGCCATTTATACCTTCCATATCTCACAGAAATGAGCATGCCAGTAGATCTCAGAAAACTGAGACAGAGATTCATCTCAATGCAGAATCTCAGAGAACTGGAAGTTCAACATGTGACTTATTTATCGCCGATAATTCATAG | 1872 | 42.25 | MFKFQELIRRDIGKIATNIAMEQGKALKGAQSDVLQGLEVIERACRVATSQMGEFIPNSSNGIDVYHIREPLGVCAGICASNYPETFSLWMFPTAVTCGNTFILKSSERNPGASLMIAELAMEAGLPDGVLNIIHGTHNIVNYICDDEEIKAISFVGTIAKDEMDIYVRAAASGKRVQSYRGSKNYSIIMPDASMDACLDTLIASGFSVVGQRCMALSIVVFVGGSITWLEELVERAKLLKVTVGTDHNADLGPVNSAEARDQICRLIQNAIESGATLMLDGRDIVVPGYEKGNFIGPTILSDVTSTREFYKEEIYGPVLLCMKTENLEEAIATVNRSNNGVTASIFTTAGAAARKFQNEVEAGVVGVNVPVTWSFPFFNGSNALCSGGDSQFYGKSCLEFYTQVKTVVQQWKDFPSDGASICGPSSSKADARSLHISSGLPSTSRRELHLQRTSLTISPESEMDPTIRIMPPISSASDTDLSNSGASSESPIVLPLQSENDHSNRNISPTIQRHETISHVLEGINLPPSRKTDLEGLLGSKSHDKVCSTNSQANRLAPFMAEVPHLSDSCLFSPPDGPFIPSISHRNEHASRSQKTETEIHLNAESQRTGSSTCDLFIADNS | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4826596 | 4839683 | - | Bma028861.2 | Bma09g00142 | 88188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00142 | 623 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 1 | 181 | IPR016162 | GO:0016491 | |
Bma09g00142 | 623 | PANTHER | METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE | 1 | 539 | - | - | |
Bma09g00142 | 623 | MobiDBLite | consensus disorder prediction | 473 | 491 | - | - | |
Bma09g00142 | 623 | Pfam | Aldehyde dehydrogenase family | 1 | 408 | IPR015590 | GO:0016491 | |
Bma09g00142 | 623 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 182 | 375 | IPR016163 | GO:0016620 | |
Bma09g00142 | 623 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 1 | 539 | IPR010061 | GO:0004491 | |
Bma09g00142 | 623 | TIGRFAM | MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) | 1 | 412 | IPR010061 | GO:0004491 | |
Bma09g00142 | 623 | MobiDBLite | consensus disorder prediction | 466 | 491 | - | - | |
Bma09g00142 | 623 | SUPERFAMILY | ALDH-like | 2 | 414 | IPR016161 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma08g00029 | Bma-Chr8:465816 | Bma09g00142 | Bma-Chr9:4826596 | 0 | dispersed | |
Bma09g00142 | Bma-Chr9:4826596 | Bma05g00591 | Bma-Chr5:35840271 | 2.25E-38 | dispersed | |
Bma09g00142 | Bma-Chr9:4826596 | Bma01g01773 | Bma-Chr1:60456044 | 1.12E-37 | transposed | |
Bma09g00142 | Bma-Chr9:4826596 | Bma07g00481 | Bma-Chr7:5816668 | 1.23E-37 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00142 | K00140 | - | qsu:111997886 | 624.394 |