Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00142 ATGTTCAAGTTCCAGGAGCTCATTCGCCGAGATATCGGTAAGATTGCAACGAATATTGCCATGGAACAGGGTAAGGCATTGAAGGGTGCCCAAAGTGATGTTCTTCAGGGTTTAGAGGTGATTGAACGTGCTTGTAGAGTTGCAACTTCCCAAATGGGGGAGTTCATTCCTAATTCATCTAATGGAATTGACGTGTACCACATTAGAGAGCCACTTGGTGTTTGTGCGGGAATATGCGCTTCTAATTATCCAGAAACATTCTCCTTATGGATGTTTCCTACAGCAGTTACATGTGGCAATACATTTATTCTCAAGTCTTCGGAAAGAAACCCTGGAGCTTCATTGATGATTGCAGAACTGGCAATGGAGGCTGGCCTGCCTGATGGTGTCCTAAACATTATACATGGAACCCATAATATTGTTAATTACATCTGTGATGATGAGGAAATAAAAGCCATATCTTTTGTTGGTACAATTGCTAAGGATGAAATGGACATATATGTAAGGGCAGCTGCTAGTGGGAAGCGGGTCCAGTCCTATAGAGGAAGCAAAAATTATTCAATTATCATGCCTGATGCTAGCATGGATGCCTGTTTGGACACTCTTATTGCTTCCGGCTTTAGTGTTGTGGGGCAGAGATGCATGGCTCTCAGCATTGTTGTTTTTGTTGGAGGTTCAATTACATGGTTAGAAGAACTTGTGGAACGGGCCAAATTACTAAAGGTAACTGTGGGTACAGATCACAATGCTGACCTTGGTCCAGTAAATTCTGCAGAGGCAAGGGATCAGATATGCAGATTAATCCAAAATGCCATTGAAAGCGGTGCTACGCTTATGCTTGATGGGAGAGATATTGTGGTTCCAGGCTATGAAAAGGGAAACTTTATTGGACCTACCATATTATCTGATGTTACATCCACTAGAGAGTTCTATAAGGAAGAAATTTATGGACCTGTTCTCCTTTGTATGAAGACTGAAAACCTCGAGGAGGCTATAGCCACTGTGAACAGAAGCAACAATGGAGTTACAGCTTCCATATTCACCACCGCAGGCGCTGCAGCAAGGAAGTTCCAGAACGAAGTTGAAGCTGGAGTGGTTGGAGTCAATGTCCCCGTCACCTGGTCATTTCCCTTCTTTAATGGCTCAAATGCTCTTTGTAGTGGAGGAGACTCTCAATTTTATGGTAAATCTTGTCTAGAATTTTACACCCAAGTGAAGACTGTAGTACAACAGTGGAAGGATTTTCCAAGCGATGGAGCCTCGATTTGTGGTCCGTCTTCGTCCAAGGCAGATGCAAGAAGTCTACACATATCTTCAGGATTACCTTCAACATCCAGAAGAGAACTGCATTTACAAAGAACTTCATTAACAATATCTCCTGAATCAGAGATGGATCCTACCATCCGGATAATGCCTCCAATTTCTTCTGCATCGGACACTGATTTATCGAACTCTGGAGCATCTTCTGAGTCTCCTATTGTTTTGCCTTTACAATCGGAAAATGATCATTCAAATCGGAATATCTCTCCTACAATTCAGAGGCATGAAACTATATCCCATGTTTTAGAGGGGATTAATCTACCCCCGTCTCGAAAAACAGATTTGGAGGGATTACTTGGTTCCAAATCTCACGACAAAGTTTGTTCAACAAACTCACAGGCCAATAGATTGGCTCCTTTTATGGCTGAAGTACCTCATTTGAGTGACTCTTGCTTATTCTCTCCTCCAGATGGGCCATTTATACCTTCCATATCTCACAGAAATGAGCATGCCAGTAGATCTCAGAAAACTGAGACAGAGATTCATCTCAATGCAGAATCTCAGAGAACTGGAAGTTCAACATGTGACTTATTTATCGCCGATAATTCATAG 1872 42.25 MFKFQELIRRDIGKIATNIAMEQGKALKGAQSDVLQGLEVIERACRVATSQMGEFIPNSSNGIDVYHIREPLGVCAGICASNYPETFSLWMFPTAVTCGNTFILKSSERNPGASLMIAELAMEAGLPDGVLNIIHGTHNIVNYICDDEEIKAISFVGTIAKDEMDIYVRAAASGKRVQSYRGSKNYSIIMPDASMDACLDTLIASGFSVVGQRCMALSIVVFVGGSITWLEELVERAKLLKVTVGTDHNADLGPVNSAEARDQICRLIQNAIESGATLMLDGRDIVVPGYEKGNFIGPTILSDVTSTREFYKEEIYGPVLLCMKTENLEEAIATVNRSNNGVTASIFTTAGAAARKFQNEVEAGVVGVNVPVTWSFPFFNGSNALCSGGDSQFYGKSCLEFYTQVKTVVQQWKDFPSDGASICGPSSSKADARSLHISSGLPSTSRRELHLQRTSLTISPESEMDPTIRIMPPISSASDTDLSNSGASSESPIVLPLQSENDHSNRNISPTIQRHETISHVLEGINLPPSRKTDLEGLLGSKSHDKVCSTNSQANRLAPFMAEVPHLSDSCLFSPPDGPFIPSISHRNEHASRSQKTETEIHLNAESQRTGSSTCDLFIADNS 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4826596 4839683 - Bma028861.2 Bma09g00142 88188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00142 623 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 181 IPR016162 GO:0016491
Bma09g00142 623 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 1 539 - -
Bma09g00142 623 MobiDBLite consensus disorder prediction 473 491 - -
Bma09g00142 623 Pfam Aldehyde dehydrogenase family 1 408 IPR015590 GO:0016491
Bma09g00142 623 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 182 375 IPR016163 GO:0016620
Bma09g00142 623 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 539 IPR010061 GO:0004491
Bma09g00142 623 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 1 412 IPR010061 GO:0004491
Bma09g00142 623 MobiDBLite consensus disorder prediction 466 491 - -
Bma09g00142 623 SUPERFAMILY ALDH-like 2 414 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00029 Bma-Chr8:465816 Bma09g00142 Bma-Chr9:4826596 0 dispersed
Bma09g00142 Bma-Chr9:4826596 Bma05g00591 Bma-Chr5:35840271 2.25E-38 dispersed
Bma09g00142 Bma-Chr9:4826596 Bma01g01773 Bma-Chr1:60456044 1.12E-37 transposed
Bma09g00142 Bma-Chr9:4826596 Bma07g00481 Bma-Chr7:5816668 1.23E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00142 K00140 - qsu:111997886 624.394