Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00155 ATGAAGTTGCTTCGTCTTCTCCTTCTGCTCCTCCTTCTTCACCTCCATATTCTGCCTTCTCTCGCCGCTCGGATATCCGAATACCGTGCTCTTCTCTCTCTTAAAAGCTCCATTTCAGACGACCCCAGCTCCTTTCTCTCCTCTTGGAAGCTCTCTACTAGCCACTGTACTTGGGCTGGTGTTTCCTGCGATAATCACCGTCATGTCGTTAGTCTTGACCTCTCTGGAGTTAATCTCTCCGGCGTGCTTTCGCCTGATGTTGCTTACCTTGGATTTCTTACGAATCTTTCGCTCGCTGTTAATCAGTTCTCCGGCCCGGTTCCGCCGGAGATGTCTGCTCTTGCTGCACTCCGTTACCTTAACCTTTCGAATAACTTTTTCAATGGTACATTCCCTTCTGAACTGGCGGAACTGAAAAACTTGCAGGTTTTGGATGTGTATAACAACAACATGACCGGAGATTTGCCTCTTGCGGTGACGGAGCTGCCGAACCTCAGGCATTTGCATCTGGGTGGGAACTTTTTCCTCGGTCGGATTCCGGCAGAGTACGGTCGGTGGGAGTCATTGGAGTATTTGGCGGTCTCCGGTAACGAGCTTAAAGGACCCATTCCGCCGGAGATCGGAAACTTGGGGAAGCTTCGAGAACTCTACATTGGGTATTACAACAACTATGAAGATTCTTTACCGGCGGAGATCGGAAATTTGTCGTCGTTGGTACGGTTCGACGCCGCCAACTGTGGGTTAACCGGTGAAATACCGCCAGAGCTGGGAAAACTTCTGAATCTCGACACTCTGTTTCTTCAAGTGAATGCGCTATCTGGGTCTTTGACATCTGAACTTGGGATGTTAAAGAGCTTGAAGTCAATGGATTTGTCTAACAATGTCCTCTCTGGTGAGATTCCGATTTCATTCTCCGATCTGAAGAACTTGACGCTGTTAAATCTGTTTAGAAACCAGCTTCGCGGAGCGATTCCGGACTTCATCGGAGACTTGCCGGAGTTAGAAGTGTTGCAGTTGTGGGAAAATAATCTCACCGGTTGGATTCCTCAGGGTCTCGGAAAGAATGGGAGGCTTCAGCTTCTCGATCTTTCTTCTAACAAGCTAACCGGAACTCTTCCTCCGGAAATGTGTTCCGGCAATCGCCTTCAGACTCTGATTACTCTTGGAAATTTCTTGTTTGGCCCGATTCCGGAGTCTCTTGGGAAATGCGAGTCGCTCAGTCGTATTCGAATGGGGGGAAATTTTCTCAATGGATCGATCCCGAATGGTCTCTTTGATTTGCGGAAGCTTACTCAGGTCGAATTGCAAAACAACTATCTCGCCGGAGAATTTCCGGTAATACTTTCGATATCGGGGAATCTCGGTCAGATTAGTCTGTCAAACAATCAACTTTCTGGGTCATTGCCACCCACCATTGGAAACTTCTCCGGCGTGCAAAAACTTCTCCTCGACGGAAACAATTTCTCCGGTCCAATACCATCTGAGATCGGAAAGTTACAACAGCTATCAAAGATCGATTTCAGCCATAACCAGTTCTCCGGTTCGATTACACCAGAAATAAGCAAATGCAAGCTCCTTACGTTCGTTGATCTCAGTAGAAACGAGCTCTCCGGCGAGATTCCGAACGAGATTACTTCCATGAGGATTTTGAATTATCTGAACCTATCTAGAAACCATTTAGTAGGAAACGTTCCTTCTTCCATAGCCTCAATGCAGAGCTTAACTTCTGTAGATTTTTCCTACAACAATCTCTCGGGTTTAATTCCCGGCTCCGGGCAATTCAGCTACTTTAATGCCACGTCATTTCTCGGCAATCCCAATCTCTGCGGCCCTTACTTAGGACCTTGCAAAAATGGAGTCGCGAATTCTATGGAACAATCTCATACGAAATCCCACCTATCAGCTTCGCTGAAGCTCCTGCTAGTTATTGGATTGCTAGTCTGCTCCATTGCATTCGCCATTGTAGCAATTATAAAAGCTCGATCATTAAAACGAGGGAGTGCAGCTAGAGCATGGAAATTAACAGCCTTTCAACGCTTGGATTTTACAGCGGACGATGTTTTAGATTCCTTGAAAGAAGATAACATCATCGGAAAAGGAGGGGCTGGAATAGTTTACAAAGGGTCTATGCCAAACGGGGATATCATTGCCATCAAACGACTTCCGGCGATGAGCCGTGGTTCTTCGCATGATCACGGATTCAACGCCGAGATTCAAACTCTGGGGAGGATTCGACATCGTCACATCGTTAGATTACTGGGTTTTTGTTCAAATAGCGAGACCAATCTTCTGGTGTATGAGTACATGCCTAATGGAAGCTTGGGGGAAGTTCTTCATGGCAAAAAAGGAGGACATTTGCAGTGGAACACCAGATATAAAATCGCCATTGAATCCGCCAAAGGTCTCTGCTATCTTCACCATGATTGTTCGCCTTTGATAGTTCATCGAGATGTGAAATCAAATAACATCTTGTTGGACTCTAGTTTCGAAGCTCACGTGGCAGATTTCGGCCTCGCCAAGTTTTTGCAGGACTCGGGTACTTCCGAGTGCATGTCCGCCATTGCTGGATCTTATGGTTACATAGCCCCAGAATATGCTTATACTCTGAAGGTCGACGAGAAGAGCGACGTTTACAGTTTCGGAGTAGTTTTGCTAGAGCTTGTTAGTGGAAGAAAACCAGTCGGAGAATTTGGCGATGGCGTCGACATTGTTCAGTGGGTTCGAAAAATGACAGATTCAAACAAGGAAAGAGTACTCAACATCATCGACCAGAGACTTTCTTCTGTTCCTCTTCACGAAATAATGCATGTCTTCTACGTCGCCTTGCTCTGCGTGGAAGAACAGGCAATTGAGCGACCCACCATGCGAGAGGTCGTTCAGATCTTAACCGAGCTTCCCAAGCCTCCGACAATGGCGGACTCTTGTCCTGCGTTACCCACGTCTTCGAATTCTCCCCCTCCTCCTGACCTTCTCAGCATTTGA 2982 46.85 MKLLRLLLLLLLLHLHILPSLAARISEYRALLSLKSSISDDPSSFLSSWKLSTSHCTWAGVSCDNHRHVVSLDLSGVNLSGVLSPDVAYLGFLTNLSLAVNQFSGPVPPEMSALAALRYLNLSNNFFNGTFPSELAELKNLQVLDVYNNNMTGDLPLAVTELPNLRHLHLGGNFFLGRIPAEYGRWESLEYLAVSGNELKGPIPPEIGNLGKLRELYIGYYNNYEDSLPAEIGNLSSLVRFDAANCGLTGEIPPELGKLLNLDTLFLQVNALSGSLTSELGMLKSLKSMDLSNNVLSGEIPISFSDLKNLTLLNLFRNQLRGAIPDFIGDLPELEVLQLWENNLTGWIPQGLGKNGRLQLLDLSSNKLTGTLPPEMCSGNRLQTLITLGNFLFGPIPESLGKCESLSRIRMGGNFLNGSIPNGLFDLRKLTQVELQNNYLAGEFPVILSISGNLGQISLSNNQLSGSLPPTIGNFSGVQKLLLDGNNFSGPIPSEIGKLQQLSKIDFSHNQFSGSITPEISKCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSRNHLVGNVPSSIASMQSLTSVDFSYNNLSGLIPGSGQFSYFNATSFLGNPNLCGPYLGPCKNGVANSMEQSHTKSHLSASLKLLLVIGLLVCSIAFAIVAIIKARSLKRGSAARAWKLTAFQRLDFTADDVLDSLKEDNIIGKGGAGIVYKGSMPNGDIIAIKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNSETNLLVYEYMPNGSLGEVLHGKKGGHLQWNTRYKIAIESAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKERVLNIIDQRLSSVPLHEIMHVFYVALLCVEEQAIERPTMREVVQILTELPKPPTMADSCPALPTSSNSPPPPDLLSI 993
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5397708 5400783 + Bma028875.1 Bma09g00155 88201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00155 993 Gene3D Ribonuclease Inhibitor 344 620 IPR032675 -
Bma09g00155 993 SMART LRR_typ_2 162 186 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 283 306 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 331 355 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 356 379 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 571 594 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 499 523 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 307 330 IPR003591 -
Bma09g00155 993 SMART LRR_typ_2 114 138 IPR003591 -
Bma09g00155 993 Gene3D Ribonuclease Inhibitor 24 216 IPR032675 -
Bma09g00155 993 Pfam Protein tyrosine and serine/threonine kinase 693 962 IPR001245 GO:0004672|GO:0006468
Bma09g00155 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Bma09g00155 993 ProSiteProfiles Protein kinase domain profile. 691 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00155 993 Gene3D Transferase(Phosphotransferase) domain 1 769 973 - -
Bma09g00155 993 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 979 - -
Bma09g00155 993 SUPERFAMILY RNI-like 71 393 - -
Bma09g00155 993 Pfam Leucine Rich Repeat 117 135 IPR001611 GO:0005515
Bma09g00155 993 SUPERFAMILY L domain-like 300 618 - -
Bma09g00155 993 MobiDBLite consensus disorder prediction 970 993 - -
Bma09g00155 993 Pfam Leucine Rich repeats (2 copies) 139 179 IPR025875 -
Bma09g00155 993 Gene3D Phosphorylase Kinase; domain 1 665 768 - -
Bma09g00155 993 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 979 - -
Bma09g00155 993 SMART serkin_6 691 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00155 993 SUPERFAMILY Protein kinase-like (PK-like) 686 962 IPR011009 -
Bma09g00155 993 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Bma09g00155 993 Gene3D Ribonuclease Inhibitor 217 343 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02192 Bma-Chr1:78803560 Bma09g00155 Bma-Chr9:5397708 4.12E-158 dispersed
Bma04g01039 Bma-Chr4:18724369 Bma09g00155 Bma-Chr9:5397708 3.09E-20 dispersed
Bma08g00811 Bma-Chr8:45741424 Bma09g00155 Bma-Chr9:5397708 7.64E-08 dispersed
Bma09g00155 Bma-Chr9:5397708 Bma10g00709 Bma-Chr10:10776543 0 dispersed
Bma14g00668 Bma-Chr14:7245158 Bma09g00155 Bma-Chr9:5397708 8.37E-171 dispersed
Bma14g00993 Bma-Chr14:11562693 Bma09g00155 Bma-Chr9:5397708 3.58E-06 dispersed
Bma01g00291 Bma-Chr1:2423821 Bma09g00155 Bma-Chr9:5397708 7.52E-165 transposed
Bma01g01114 Bma-Chr1:11807107 Bma09g00155 Bma-Chr9:5397708 2.51E-14 transposed
Bma01g01200 Bma-Chr1:13708814 Bma09g00155 Bma-Chr9:5397708 3.27E-17 transposed
Bma04g00251 Bma-Chr4:2139326 Bma09g00155 Bma-Chr9:5397708 1.68E-07 transposed
Bma06g01143 Bma-Chr6:48354489 Bma09g00155 Bma-Chr9:5397708 6.37E-158 transposed
Bma13g00425 Bma-Chr13:7788769 Bma09g00155 Bma-Chr9:5397708 0 transposed
Bma13g00942 Bma-Chr13:40154326 Bma09g00155 Bma-Chr9:5397708 8.27E-11 transposed
Bma14g01968 Bma-Chr14:42581795 Bma09g00155 Bma-Chr9:5397708 0 transposed
Bma15g01094 Bma-Chr15:43526502 Bma09g00155 Bma-Chr9:5397708 0 wgd
Bma15g00956 Bma-Chr15:36137684 Bma09g00155 Bma-Chr9:5397708 5.45E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66688 PF07714 PK_Tyr_Ser-Thr 1.90E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00155 - - mnt:21399160 1579.69