Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00169 TCCAGTAAGGTACTCTATCTGTGTCTCCCGTCCGATTATTCGATAGTCGTTTTATTTGTTTCCATTGTCTCGGCTATTTTCGCAGGTGTTCAATCCGCCACATTCGCTATTGTTAACAATTGCAGCTACACAGTATGGCCAGGAATTTTGTCCAGTGCTGGAACAGAGGAGCTCTCCACCACCGGCTTCGTCCTCTTATCCGGTGGCTCCACCCTCGTCAACGTCCCAACCTCCTGGTCCGGTCGCCTATGGGGTCGGACATATTGCTCTCAAGACTCCGATGGGAAGTTCTCCTGCGCCACCGCGGACTGCGGCTCCGGCACTGTCGAATGTAGTGGAGCAGGCGCAGTGCCACCAGCTACGCTCGCCGAGTTTACCTTGAACGGCAGCGGCGGCCTCGATTTTTACGACGTCAGCCTCGTGGACGGCTATAACCTGGGAATTCTTATCACCCCACTAGGCGAAACCATCGGAAATTGTACTTCGACTGGGTGCTTTGCCGATTTAAACAAGGTTTGTCCGCCTGAGCTGCGGGTGACGATCACCGGCATAGATGGCATTGGGCAGAACGTGGCTTGCAAGAGCGCGTGCGAGGCGTTCGGAGAGCCGGAATACTGTTGTAGCGGAGTATATTCAAATCCAAATACTTGCAAACCTACGTCATATTCGCAGTTCTTCAAAAATGCATGTCCATTAGCTTACAGCTATGCCTACGACGATGGAAGCAGCACCTTCACTTGCTCTTCCCCTACCTATATCATCACTTTCTGCCCCTCCTCCTCCCCCAGGTTAACTACATTTCACTCTTCTTCTTCTCATCCCTTGCACTAA 831 52.11 SSKVLYLCLPSDYSIVVLFVSIVSAIFAGVQSATFAIVNNCSYTVWPGILSSAGTEELSTTGFVLLSGGSTLVNVPTSWSGRLWGRTYCSQDSDGKFSCATADCGSGTVECSGAGAVPPATLAEFTLNGSGGLDFYDVSLVDGYNLGILITPLGETIGNCTSTGCFADLNKVCPPELRVTITGIDGIGQNVACKSACEAFGEPEYCCSGVYSNPNTCKPTSYSQFFKNACPLAYSYAYDDGSSTFTCSSPTYIITFCPSSSPRLTTFHSSSSHPLH 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6244082 6244912 + Bma028897.1 Bma09g00169 88215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00169 276 Pfam Thaumatin family 39 258 IPR001938 -
Bma09g00169 276 Gene3D Thaumatin 33 258 IPR037176 -
Bma09g00169 276 PIRSF PR5 4 274 IPR001938 -
Bma09g00169 276 ProSitePatterns Thaumatin family signature. 95 111 IPR017949 -
Bma09g00169 276 ProSiteProfiles Thaumatin family profile. 32 258 IPR001938 -
Bma09g00169 276 SMART tha2 35 258 IPR001938 -
Bma09g00169 276 CDD TLP-PA 34 257 - -
Bma09g00169 276 PANTHER OS03G0233200 PROTEIN 28 265 IPR001938 -
Bma09g00169 276 PANTHER - 28 265 - -
Bma09g00169 276 SUPERFAMILY Osmotin, thaumatin-like protein 33 259 IPR037176 -
Bma09g00169 276 PRINTS Pathogenesis-related protein signature 34 46 IPR001938 -
Bma09g00169 276 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Bma09g00169 276 PRINTS Pathogenesis-related protein signature 248 257 IPR001938 -
Bma09g00169 276 PRINTS Pathogenesis-related protein signature 82 93 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02374 Bma-Chr1:81385966 Bma09g00169 Bma-Chr9:6244082 7.60E-114 dispersed
Bma02g00715 Bma-Chr2:30599211 Bma09g00169 Bma-Chr9:6244082 6.86E-103 dispersed
Bma13g01154 Bma-Chr13:44738564 Bma09g00169 Bma-Chr9:6244082 8.45E-15 dispersed
Bma09g00169 Bma-Chr9:6244082 Bma09g00172 Bma-Chr9:6358121 0 proximal
Bma15g00945 Bma-Chr15:34898244 Bma09g00169 Bma-Chr9:6244082 6.54E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00169 - - nnu:104605542 371.318