Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00172 TCCGATTATTCGATAGTCGTTTTATTTGTTTCCATTGTCTCGGCTATTTTCGCAGGCGCTCAATCCGCCACATTCGCTATTGTTAACAATTGCAGCTACACAGTATGGCCCGGAATTTTGTCCAGTGCTGGAACAGAGGAGCTCTCCACCACCGGCTTCGTCCTCTTATCCGGTGGCTCCACCCTCGTCAACGTCCCTACCTCCTGGTCCGGTCGCCTATGGGGTCGGACATATTGCTCTCAAGACTCCGATGGGAAGTTCTCCTGCGCCACCGCGGACTGCGGCTCCGGCACTGTCGAATGTAGTGGAGCAGGCGCAGTGCCACCAGCTACCCTCGCCGAGTTTACCTTGAACGGCAGCGGCGGCCTCGATTTTTACGACGTCAGCCTCGTGGACGGCTATAACCTGGGAATTCTTATCACCCCACTAGGCGAAACCATCGGAAATTGTACTTCGACTGGGTGCTTTGCCGATTTAAACAAGGTTTGTCCGCCTGAGCTGCGGGTGACGATCACCGGCATAGATGGCATTGGGCAGAACGTGGCTTGCAAGAGCGTGTGCGAGGCGTTCGGAGAGCCGGAATACTGTTGTAGCGGAGTATATTCAAATCCAAATACTTGCAAACCTACGTCATATTCGCAGTTCTTCAAAAATGCATGTCCATTAGCTTACAGCTATGCCTACGACGATGGAAGCAGCACTTTCACTTGCTCTTCCCCTACCTATATCATCACTTTCTGCCCCTCCTCCTCCCCCAGGTTAACTACATTTCGCTCTTCTTCTTCTCATCCCCTGCACTAA 801 52.56 SDYSIVVLFVSIVSAIFAGAQSATFAIVNNCSYTVWPGILSSAGTEELSTTGFVLLSGGSTLVNVPTSWSGRLWGRTYCSQDSDGKFSCATADCGSGTVECSGAGAVPPATLAEFTLNGSGGLDFYDVSLVDGYNLGILITPLGETIGNCTSTGCFADLNKVCPPELRVTITGIDGIGQNVACKSVCEAFGEPEYCCSGVYSNPNTCKPTSYSQFFKNACPLAYSYAYDDGSSTFTCSSPTYIITFCPSSSPRLTTFRSSSSHPLH 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6358121 6358921 + Bma028903.1 Bma09g00172 88218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00172 266 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Bma09g00172 266 ProSiteProfiles Thaumatin family profile. 22 248 IPR001938 -
Bma09g00172 266 Pfam Thaumatin family 29 248 IPR001938 -
Bma09g00172 266 PANTHER - 18 255 - -
Bma09g00172 266 PIRSF PR5 1 264 IPR001938 -
Bma09g00172 266 SUPERFAMILY Osmotin, thaumatin-like protein 23 249 IPR037176 -
Bma09g00172 266 CDD TLP-PA 24 247 - -
Bma09g00172 266 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Bma09g00172 266 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Bma09g00172 266 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Bma09g00172 266 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Bma09g00172 266 PANTHER OS03G0233200 PROTEIN 18 255 IPR001938 -
Bma09g00172 266 Gene3D Thaumatin 23 248 IPR037176 -
Bma09g00172 266 SMART tha2 25 248 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00172 Bma-Chr9:6358121 Bma15g00945 Bma-Chr15:34898244 1.88E-90 dispersed
Bma09g00169 Bma-Chr9:6244082 Bma09g00172 Bma-Chr9:6358121 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00172 - - pvy:116116686 367.081