Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00177 ATGGCTTCCCTCCTCGCATTCTTCTTCTCGATTCTCGTGTTATCGATGTGTTCTCTTGGAAATGCATTGAGCTTAAATCATTATGCAAACACATGCCCGACCGCAGAGTCGATCATTACGAAGGCAGTCGGCGATGCAGCGAGAAATGACAAAACTGTCCCTGCGGCTCTTCTTCGCATGCACTTCCATGACTGCTTTATAAGGGGGTGTGATGCTTCTGTGCTGCTAAACTCAGTGGGAGGCAATAAAGCCGAAAAGGATGGGCCGCCTAACGTGTCTTTGCATGCTTTTTATGTCATTGACAATGCAAAGACAGAAGTAGAGAAAGTATGCCCTGGTGTCGTCTCCTGTGCTGATATCTTGGCCCTGGCTGCAAGAGATGCAGTTGTTCTTTCAGGGGGGCCAGCATGGGATGTTCCTAAGGGAAGAAAAGATGGTCGAATATCGAGAGCAAACGAAACGATACAATTACCTTCTCCACGATTCAACTTATCTCAGCTGCAGCAAAGCTTCGGCCAGAGAGGTCTTTCGATGGCCGATCTCGTGGCTCTTTCAGGAGGCCACACACTTGGATTTTCTCATTGTTCGTCTTTCGAAAACAGAATCCAAAACTTCAGTTCTACGCATAACATCGACTCGACAATTAGTCCCTCCTTCGCAGCGAGTTTGAGGAGTGTTTGCTCTGCCAAAACCAAGGCGAAAAATGCAGGCGTTGGGATGGACCCTTCTTCAACAACTTTCGATAACACATACTACAAGTTGATCCTCCAGCAAAAGGGTCTCTTTGCTTCTGACCAAGCTCTGCTCGACTCGCAAAACACGAAAAATCTGGTGCTTCAGTTTGCCGGCTCACATGAGGCCTTCTCTAAGGCCTTTGTTAACTCCATGGTCAAAATGAGTAGCCTTACAGGTGGGCAGGAGGTTAGAAAAAATTGCAGAGTGGTTAACTAA 951 47.21 MASLLAFFFSILVLSMCSLGNALSLNHYANTCPTAESIITKAVGDAARNDKTVPAALLRMHFHDCFIRGCDASVLLNSVGGNKAEKDGPPNVSLHAFYVIDNAKTEVEKVCPGVVSCADILALAARDAVVLSGGPAWDVPKGRKDGRISRANETIQLPSPRFNLSQLQQSFGQRGLSMADLVALSGGHTLGFSHCSSFENRIQNFSSTHNIDSTISPSFAASLRSVCSAKTKAKNAGVGMDPSSTTFDNTYYKLILQQKGLFASDQALLDSQNTKNLVLQFAGSHEAFSKAFVNSMVKMSSLTGGQEVRKNCRVVN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6543039 6544271 - Bma028907.1 Bma09g00177 88223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00177 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PANTHER PEROXIDASE 25-RELATED 6 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Bma09g00177 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601|GO:0042744
Bma09g00177 316 ProSiteProfiles Plant heme peroxidase family profile. 22 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PANTHER PEROXIDASE 6 315 - -
Bma09g00177 316 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00177 316 Gene3D Peroxidase, domain 2 158 299 - -
Bma09g00177 316 Gene3D - 26 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00177 Bma-Chr9:6543039 Bma12g00789 Bma-Chr12:36482569 3.34E-94 dispersed
Bma09g00177 Bma-Chr9:6543039 Bma09g00180 Bma-Chr9:6651561 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00177 K00430 - rcu:8268089 481.1