Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00248 ATGTCTCAAGGCTATGCCATCCAACTTTACTTCGATCTGGCTCTCGAAAATCAGGTGTTGAAGGCTTGGAATGTACTAGCTCACTGTCAAATCAATACTCAACTCATCGAAATCGAATCCCTCCCTCACATCACCCTCTTCTCCACTACCCTCCTCGAACTTGCAAAGCTTCAAGTCATTCTCAAAACCTTGGCTTCCAGGCAAGAACCGTTGCCTCTCTCTTTCTCGTCTGTTGGAAGCCTTCCCAGGGACAACAATGTTCTTTTTCTCGGGCCGACACCTTTGATTTTGCTCCTCCAGCTTCACTCTCAATTGTGCGAAGCATTGAGGAAAGAAGGAATCGAAATTGGGCATGAATATCTGGTCCATTCGTGGATTCCATTATGTGCGGTTGCTGAAGAGGTACCTAAGGCACGTATGGCAAAGGCCTTTTCGGTTCTTCGAGACCTAAAGTTGCCAGTTTCTGGATACGTAATGGACATTGGATTGGTGGAGTTTTCCCCACTTCTTGAACTCCTCTCCTTTGCCCTCGGCAACACTGTAGAGCCATGA 552 47.1 MSQGYAIQLYFDLALENQVLKAWNVLAHCQINTQLIEIESLPHITLFSTTLLELAKLQVILKTLASRQEPLPLSFSSVGSLPRDNNVLFLGPTPLILLLQLHSQLCEALRKEGIEIGHEYLVHSWIPLCAVAEEVPKARMAKAFSVLRDLKLPVSGYVMDIGLVEFSPLLELLSFALGNTVEP 183
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 10927900 10928451 + Bma029032.1 Bma09g00248 88294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00248 183 PANTHER - 1 182 - -
Bma09g00248 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Bma09g00248 183 Pfam 2'-5' RNA ligase superfamily 42 164 - -
Bma09g00248 183 SUPERFAMILY LigT-like 5 127 IPR009097 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00248 Bma-Chr9:10927900 Bma14g01523 Bma-Chr14:30727113 3.23E-118 dispersed
Bma09g00248 Bma-Chr9:10927900 Bma05g00822 Bma-Chr5:45578562 2.86E-49 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00248 - - zju:107415389 255.758