Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma09g00248 | ATGTCTCAAGGCTATGCCATCCAACTTTACTTCGATCTGGCTCTCGAAAATCAGGTGTTGAAGGCTTGGAATGTACTAGCTCACTGTCAAATCAATACTCAACTCATCGAAATCGAATCCCTCCCTCACATCACCCTCTTCTCCACTACCCTCCTCGAACTTGCAAAGCTTCAAGTCATTCTCAAAACCTTGGCTTCCAGGCAAGAACCGTTGCCTCTCTCTTTCTCGTCTGTTGGAAGCCTTCCCAGGGACAACAATGTTCTTTTTCTCGGGCCGACACCTTTGATTTTGCTCCTCCAGCTTCACTCTCAATTGTGCGAAGCATTGAGGAAAGAAGGAATCGAAATTGGGCATGAATATCTGGTCCATTCGTGGATTCCATTATGTGCGGTTGCTGAAGAGGTACCTAAGGCACGTATGGCAAAGGCCTTTTCGGTTCTTCGAGACCTAAAGTTGCCAGTTTCTGGATACGTAATGGACATTGGATTGGTGGAGTTTTCCCCACTTCTTGAACTCCTCTCCTTTGCCCTCGGCAACACTGTAGAGCCATGA | 552 | 47.1 | MSQGYAIQLYFDLALENQVLKAWNVLAHCQINTQLIEIESLPHITLFSTTLLELAKLQVILKTLASRQEPLPLSFSSVGSLPRDNNVLFLGPTPLILLLQLHSQLCEALRKEGIEIGHEYLVHSWIPLCAVAEEVPKARMAKAFSVLRDLKLPVSGYVMDIGLVEFSPLLELLSFALGNTVEP | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 10927900 | 10928451 | + | Bma029032.1 | Bma09g00248 | 88294 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma09g00248 | 183 | PANTHER | - | 1 | 182 | - | - | |
| Bma09g00248 | 183 | Gene3D | Cyclic phosphodiesterase | 5 | 178 | - | - | |
| Bma09g00248 | 183 | Pfam | 2'-5' RNA ligase superfamily | 42 | 164 | - | - | |
| Bma09g00248 | 183 | SUPERFAMILY | LigT-like | 5 | 127 | IPR009097 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma09g00248 | Bma-Chr9:10927900 | Bma14g01523 | Bma-Chr14:30727113 | 3.23E-118 | dispersed | |
| Bma09g00248 | Bma-Chr9:10927900 | Bma05g00822 | Bma-Chr5:45578562 | 2.86E-49 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma09g00248 | - | - | zju:107415389 | 255.758 |