Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00252 ATGGAGAATACATTGTTTTATGTCTCAGTCTCTGTCATCTTTCTCTCTCTAGCGTTCAAGCTTTTCCTCAGAACGAACGCTCGTCGCCGCAGAAAATTACCGCCGAGCCCACCTTCTCTTCCGATTATCGGTCACCTCCATCTCATAAAACAACCGGTTCATCGTACTTTCCATAAGCTCTCACAGACGTACGGTCCCATTTTCCTTCTGAAATTCGGATCTAGAAAGGTTATTGTCGTTTCTTCTCCGACGGCAGTACAGGAATGCTTCACCAAAAATGACATCGTTCTGGCCAACCGCCCTCGCCTTCTATTGGGCAAACACCTGAGCTACAACTACTCGACCATTGTCACTTCCCCCTATGGCGACCACTGGAGGAATCTCCGGAGAATCGGAGCTATCGAGATCTTTTCCACGAGCCGAATCAACTCATTTTCTGGGATGCGGAGGGACGAAGTGAAGCGTTTGCTACGGAAACTGACAGAAAATTCCACCGGAGAATTCTCTAAAGTGAACCTGCAACGGCTGTTCCCGGAGCTTACGTTTAACATCGTAATGAGAATGGCTGCCGGAAAGAGATATTACGGCGACGAGGTGTCGAATGAAGAAGAAGCGGGCCGATTCAGGGAGTTAATGAAGGAGGTTCTTGCTCATGGTGGAGCTTCAAATCCGGGAGATTTTCTGCCGATTCTGAACTGGGTCAGTAGGAATGGATACGAGAAGAGAATAAAAAAGATTGCGAAGAGAGTAGATGCGTTGCTACAGAGTCTGGTTGATGAGCATCGGTCGAAGAGAGAAGAAGGAAGGAACACCATGATTGACCACCTACTCTCTCTGCAACATTCAGAGCCCGACTACTACAGCGAACAGTTTGTCAAGGGATTTGTACTGACATTGATTCTCGCGGGAACCGACACAACGGCAGTGACTTTGGAGTGGGCAATGACTCATTTGTTGAATAATCCCGAGGTTTTGCAAAAAGCAAAGGCCGAGTTGGATTCTCAAATAGGAGAACACCGGTTAGTCGAGGAAACCGACATGTCAAGATTGCCCTTTCTCCGAGGCGTAATTTCAGAGACCCTAAGATTAAACCCATCAGCACCTATGCTAATCCCACATTACTCCTCCACCGACTGTATCGTTGGGGGCTACGACTTGGAGCGTGACACAATTTTATTGGTGAATGCTTGGGCCATACATAGGGACCCAAACCTTTGGGACGAACCCACAAAATTCAAGCCGGAAAGATATCAAGACGAGAAGGAGACGACATTGACTTATAAACTCATGCCATTCGGGTTGGGTAGACGGGCCTGCCCAGGCTCGGGTATGGCCCAACGAGTGGTAGGGTTGGTGCTAGCGTCGTTGATTCAATGTTTTGATTGGGAGAGAGAGGGGGAGGAAGAGATTGATATGAGTGAAGGTAGTGGTCTCACTATGCCCAAGGTACTTCCATTGCAGGCAATGTGCAAAGCTCGACCAATCATGGACATAGTTAGTGCTGAGCCTCTCGATGCGATTTGA 1524 48.16 MENTLFYVSVSVIFLSLAFKLFLRTNARRRRKLPPSPPSLPIIGHLHLIKQPVHRTFHKLSQTYGPIFLLKFGSRKVIVVSSPTAVQECFTKNDIVLANRPRLLLGKHLSYNYSTIVTSPYGDHWRNLRRIGAIEIFSTSRINSFSGMRRDEVKRLLRKLTENSTGEFSKVNLQRLFPELTFNIVMRMAAGKRYYGDEVSNEEEAGRFRELMKEVLAHGGASNPGDFLPILNWVSRNGYEKRIKKIAKRVDALLQSLVDEHRSKREEGRNTMIDHLLSLQHSEPDYYSEQFVKGFVLTLILAGTDTTAVTLEWAMTHLLNNPEVLQKAKAELDSQIGEHRLVEETDMSRLPFLRGVISETLRLNPSAPMLIPHYSSTDCIVGGYDLERDTILLVNAWAIHRDPNLWDEPTKFKPERYQDEKETTLTYKLMPFGLGRRACPGSGMAQRVVGLVLASLIQCFDWEREGEEEIDMSEGSGLTMPKVLPLQAMCKARPIMDIVSAEPLDAI 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12400520 12655273 + Bma029044.1 Bma09g00252 88298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00252 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Bma09g00252 507 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 498 - -
Bma09g00252 507 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 6 498 - -
Bma09g00252 507 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 Gene3D Cytochrome P450 20 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma09g00252 507 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g01126 Bma09g00252 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01120 Bma-Chr3:14569209 Bma09g00252 Bma-Chr9:12400520 3.78E-51 dispersed
Bma09g00247 Bma-Chr9:10814839 Bma09g00252 Bma-Chr9:12400520 0 dispersed
Bma09g00252 Bma-Chr9:12400520 Bma09g00984 Bma-Chr9:49367464 7.30E-117 dispersed
Bma09g00251 Bma-Chr9:12128728 Bma09g00252 Bma-Chr9:12400520 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00252 K13260 - zju:107424876 693.73