Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00255 ATGGAGACTCTCCATTACCCAATCTCCTTGTCCAAATCCAAGTCGCTGTTGCATTGTATACAAAACAGACGAATCAAGTCGCTGAGAGGTGTATATCTTTGCTCTCTACGGTTTTCTACAAGGGGTATCGAGCCCTTCCCAGCTTTTCCTTCTACTGCTTCAAATTTTAGTAATATCCGTTTTGGGCGTTTTCATTGCGTCTCCGAGTCCGCTGATCGTCACCATGATGACCATCACCACCACTGCCACCACAACCACCACCATTGCAATGATGGTACGGAGCTGACAGGACCTCAAAAGGCGTTGATTAGCTTCGCCAAAGCCACTAAGTGGATAGACTTGGCCAATTATCTGAGAGAGCACCTACAACTGTGTTGTGCTTCCACTGCTTTGTTTGTTGCTGCTGCCGCTTGTCCTTACTTAGTGCCCAAGCACGCAGTGAAGCCTCTGCAGAATGCGTTCATAGTCTCAGCTTTCCCTCTAGTTGGGGTGTCTGCATCTCTTGATGCTCTTACTGATATCTGTGGTGGGAAAGTAAACATTCATGTTCTGATGGCACTTGCTGCCTTTGCATCAATATTAATGGGGAACGCTATAGAAGGAGGACTACTTCTTGCCATGTTTAATCTAGCTCATATTGCTGAAGAGTATTTCACTAGCCGATCAATGGTTGATGTTAAAGAGTTGAAAGAAAATTATCCTGAATATGCGCTAGTCCTGGACATTAATGATGACCAGCTTCCTAATACTTCAGAGTTGGCATATAAAAGGGTGCAAGTGCATGATGTAGAAGTTGGCTCATATATCTTGATTCTTGCTGGGGAGTCTGTGCCTGTAGATTGTGAAGTTTACCAAGGTAGTGCAACAATTACCGTTGAGCACTTAACAGGAGAAGTCAAACCTCTAGAGATAAATGTTGGAGATCGGGTACCCGGTGGTGCAAGAAATTTGGATGGAAGAATAGTAGTGAAGGTGATAAAAACTTGGAAAGAATCTACTCTGAACAAGATAGTGCAGCTAACTGAAGAAGCACAGATGAATAAGCCAAAGCTTCAAAGGTGGCTCGATGAATTTGGTGAACAGTACAGCAAGGTTGTTGTTGTTTTGTCTGTTGCAATTGCCATCATTGGGCCATTATTATTCAAGTGGCCCTTTATTTGTACACCAGCTTGCAGAGGATCAATCTATAGAGCACTGGGCCTTATGATGGCAGCATCACCATGTGCCCTGGCCGTTGCTCCATTGGCATACGCTACTGCAATTAGTTCCTGTGCCAGACAGGGAATACTCCTTAAAGGTGGGCATGTGCTAGATGCTTTGGCTTCTTGCCAGACAATTGCATTTGATAAAACTGGGACACTGACTACTGGCGGGCTTGTGTTTAAAGCAATTGAACCAATCTATGGACATAGGGTCATACAAAACAAATCAGATTTTTCTTCTTGTTGCATTCCTAGCTGTGAAAAAGAAGCGCTTGCTGTGGCAGCAGCAATGGAGAAGGGTACTACTCATCCAATTGGAAGAGCCGTGGTTGACCATAGTGTGGGAAAAGATCTTCCTCCAATATCTGTTGAAAGTTTCGAGTATTTTCCGGGTAAAGGTCTGGTAGCAACTCTGCATGGCATCAAGTCAGGAACTGGAATGGGAAAACTGTTGACAGCATCCCTTGGTTCTGTTGATTTCATTACTTCACTTTGTAAATCTAAAACAGAGTCAAGAAAGGTTCAGGAAGCTGTGAATGCATCATCTTATGGAAGAGAATTTGTTTGTGCTGCTCTTTTAGTGGATGAAAAGATAACACTGATTCACCTTGAAGATCGACCTCGACCTGGAGTATTAGATGTCATAGTTGACTTACAAGATCATGCAAAACTCCGCATAATGATGCTAACAGGAGATCACGAGTCAAGTGCACGGAGAGTTGCCAATGCAGTGGGCATCAAGGAAGTTTATTGTGGTCTGAAACCTGAAGATAAGCTTAGTTATGTGAAGGATATCTCAAGGGAGACAGGTGGAGGTTTGATAATGGTTGGTGAAGGCATTAACGATGCACCAGCTCTTGCTGCAGCCTCAGTTGGAATAGTGCTTGCTCAACGTGCTAGTGCAACTGCTGTAGCGGTTGCAGATGTTCTTCTACTGCGAGACAACATCCTTGGTGTGCCATTTTCCATTGCCAAGTCACGCCAAACAACTTCCCTTGTTAAACAGAACGTCGCCCTTGCATTAACATCTATTTTTTTGGCTTCCCTTCCATCTGTGCTGGGGTTTGTGCCCTTATGGTTAACGGTTCTTTTACATGAAGGTGGTACGCTTATGGTTTGCCTTAACTCAATACGTGCTCTTAATAACCCAACTTGGTCATGGAGGCAAGACTTGCTACATCTTTTTAATGACTTCAGTTCCAAAATCGCAGCATTGACTCCAAAACCCAGTTCTAGCAACCCTGAAGCTGCCCATTTGTAA 2463 43.97 METLHYPISLSKSKSLLHCIQNRRIKSLRGVYLCSLRFSTRGIEPFPAFPSTASNFSNIRFGRFHCVSESADRHHDDHHHHCHHNHHHCNDGTELTGPQKALISFAKATKWIDLANYLREHLQLCCASTALFVAAAACPYLVPKHAVKPLQNAFIVSAFPLVGVSASLDALTDICGGKVNIHVLMALAAFASILMGNAIEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENYPEYALVLDINDDQLPNTSELAYKRVQVHDVEVGSYILILAGESVPVDCEVYQGSATITVEHLTGEVKPLEINVGDRVPGGARNLDGRIVVKVIKTWKESTLNKIVQLTEEAQMNKPKLQRWLDEFGEQYSKVVVVLSVAIAIIGPLLFKWPFICTPACRGSIYRALGLMMAASPCALAVAPLAYATAISSCARQGILLKGGHVLDALASCQTIAFDKTGTLTTGGLVFKAIEPIYGHRVIQNKSDFSSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPPISVESFEYFPGKGLVATLHGIKSGTGMGKLLTASLGSVDFITSLCKSKTESRKVQEAVNASSYGREFVCAALLVDEKITLIHLEDRPRPGVLDVIVDLQDHAKLRIMMLTGDHESSARRVANAVGIKEVYCGLKPEDKLSYVKDISRETGGGLIMVGEGINDAPALAAASVGIVLAQRASATAVAVADVLLLRDNILGVPFSIAKSRQTTSLVKQNVALALTSIFLASLPSVLGFVPLWLTVLLHEGGTLMVCLNSIRALNNPTWSWRQDLLHLFNDFSSKIAALTPKPSSSNPEAAHL 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13222731 13230693 + Bma029054.1 Bma09g00255 88301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00255 820 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 181 779 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma09g00255 820 SFLD C1.7: P-type atpase like 429 730 - -
Bma09g00255 820 SUPERFAMILY Calcium ATPase, transmembrane domain M 183 748 IPR023298 -
Bma09g00255 820 Gene3D - 440 728 IPR023214 -
Bma09g00255 820 Pfam haloacid dehalogenase-like hydrolase 444 690 - -
Bma09g00255 820 Pfam E1-E2 ATPase 255 427 - -
Bma09g00255 820 SUPERFAMILY Calcium ATPase, transduction domain A 256 340 IPR008250 -
Bma09g00255 820 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 255 468 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma09g00255 820 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 582 757 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma09g00255 820 SUPERFAMILY HAD-like 445 777 IPR036412 -
Bma09g00255 820 Gene3D - 458 608 IPR023299 GO:0000166
Bma09g00255 820 PRINTS P-type cation-transporting ATPase superfamily signature 677 696 - -
Bma09g00255 820 PRINTS P-type cation-transporting ATPase superfamily signature 447 461 - -
Bma09g00255 820 PRINTS P-type cation-transporting ATPase superfamily signature 600 611 - -
Bma09g00255 820 PRINTS P-type cation-transporting ATPase superfamily signature 701 713 - -
Bma09g00255 820 PRINTS P-type cation-transporting ATPase superfamily signature 623 633 - -
Bma09g00255 820 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 54 811 - -
Bma09g00255 820 CDD P-type_ATPase_HM 124 779 - -
Bma09g00255 820 Gene3D - 219 345 - -
Bma09g00255 820 SFLD p-type atpase 429 730 IPR044492 -
Bma09g00255 820 ProSitePatterns E1-E2 ATPases phosphorylation site. 449 455 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00255 Bma-Chr9:13222731 Bma11g00286 Bma-Chr11:2630417 7.36E-44 dispersed
Bma09g00255 Bma-Chr9:13222731 Bma01g02192 Bma-Chr1:78803560 1.25E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00255 K01534 - jre:109009121 1181.78