Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00270 ATGTCCACCACTGTTATTATCCAGTTTTTCTCCCTCTTTCTATTCTCTATTTGGACCTCCTTTCCCATTCATCTTTTCATCATTGATGCCGTCCATGGCGTCTCTCCGTCGACCAACTCTCCTCATGCGGATGAAGTTTCTCTGCTGTCCTTCAAATCCAAAGCCGATTTGGGTAACAAGTTAGTCTACGACCTTAAATCACGCTTCGATTACTGTCAATGGTCGGGGGTTAAATGTTTACAGGGTCGAGTTATCAGGTTTGTTCTTCAAGATTATGGTCTGCGTGGGGTTTTCGCAGCTAATACCTTGAGTAGTCTCGACCAGCTACGAGTGCTCAGCCTCCACAATAACTCGCTCGTAGGTCCCATTCCGGACCTTTCCGGGCTGGTAAATCTGAGATCTCTCTTCCTTAGTCGCAACTTCTTCACCGGAACTTTTCCGCCGTCGATTACCACTCTTCACCGGCTACAGATTCTCGATATCTCATATAATAACTTTAGTGGGTCACTCCCGGCAACTTTGTTCAGTTTGGAGCGGCTTATTTCATTGCGGCTGGAATGGAACTTCTTCAACGGAAGCGTTCCCTCGCTGAATCAATCCTTCCTCGAAAGCTTCAATGTTTCGGGAAACAACTTAAGTGGACAAATTCCGGTGACACCCACTCTATCGCGTTTTGGAGCTTCTGCGTTTTCAGGAAACCCTGCTCTCTGCGGCGAAATCATAAATAAAGAATGCTACGCGCACTCGCCATTTTTCAAAGCGCCGAATTCGACTCCTCCATCTGAACCTCCCATCCAAATCGCAGTATCTGAAAGCGCGATTCAATCTCAAACACATGAGAAGAGGCGCAAGAATACAGTCTTCATCGTTGGGCTTTCGATTGGGGTTGTTACTGTCATAGTCGCCGTTCTCCTATGCCTATTAGTAGCACTAAGAGGATGTAAAACTCAAAATACTTCCAAGCCGGTTACAGCGTCATTTCATGAGGCAACAACAGACCCAGACGTGGAAATCCAAGTTGCTGACATCGGATTGCAATCAGAGGCGTCAAAAGAGGAACGAGTTCCAAGAGCCCAGAAAAATGGAACCCTGATATTTTGCGGGGGTGAGGAACATCTATATACATTAGAACAGTTGATGAGGGCGTCGGCAGAGTTTCTGGGAAGGGGTTCCATTGGAACTACGTACAAGGCTGCGATAGGTAACCAGTTAATCGTGACTGTGAAGCGGCTCGACGCTGCTAAAACCGCCACTCCAAGCGGTGAAATGTTCGAAAAACACATGAGCACAGTCGGTAGGCTTTGCCACCCCAATTTGGTTCCAGTTCGTGCTTATTTCCAGGCTAAGGGAGAGAGGCTCATCATCTACGATTATCAACCAAATGGAAGTCTGTTCAGCCTCATTCACGGTTCTAAATCAACGAGGTCGAAGCCTCTCCATTGGACGTCATGTTTAAAGATAGCAGACGATGTAGCCCAGGGCATTGCTTACATCCATCAAGCAACAAGCCTTATGCACGGCAACTTAAAATCCTCAAATGTTCTACTTGGAGCTGACTTTGAGGCACGTTTGACAGACTATAGCCTTAATACGTTGGTAGAATCTTCTCATAGTCAAGAAGATGTTAATTCGATGCCCCCTGAAGCCATCCTCGGCCATAACTCCATGCAGAAAGGCGATGTTTATGCCTATGGTGTCCTTTTGCTGGAACTTTTGACAGGCAAACAACCTAGCCAACACCCATATCTTGAACCCAGGGAGGTGCCGGATTGGGTCCGAGCAACGAGGGAAGAAGAGGAAGGTGGGGAAAGGCACAAACTTTCAATGCTTATAGAGGTAGCGACTATTGCTAGTTTCACATCTCCAGAGCAACGGCCAGAAATGTGGCAGGTTTTGCAAATGATCCAAGAAATCAAGGAGTGTCTTATGACAGAGGATTGA 1941 46.78 MSTTVIIQFFSLFLFSIWTSFPIHLFIIDAVHGVSPSTNSPHADEVSLLSFKSKADLGNKLVYDLKSRFDYCQWSGVKCLQGRVIRFVLQDYGLRGVFAANTLSSLDQLRVLSLHNNSLVGPIPDLSGLVNLRSLFLSRNFFTGTFPPSITTLHRLQILDISYNNFSGSLPATLFSLERLISLRLEWNFFNGSVPSLNQSFLESFNVSGNNLSGQIPVTPTLSRFGASAFSGNPALCGEIINKECYAHSPFFKAPNSTPPSEPPIQIAVSESAIQSQTHEKRRKNTVFIVGLSIGVVTVIVAVLLCLLVALRGCKTQNTSKPVTASFHEATTDPDVEIQVADIGLQSEASKEERVPRAQKNGTLIFCGGEEHLYTLEQLMRASAEFLGRGSIGTTYKAAIGNQLIVTVKRLDAAKTATPSGEMFEKHMSTVGRLCHPNLVPVRAYFQAKGERLIIYDYQPNGSLFSLIHGSKSTRSKPLHWTSCLKIADDVAQGIAYIHQATSLMHGNLKSSNVLLGADFEARLTDYSLNTLVESSHSQEDVNSMPPEAILGHNSMQKGDVYAYGVLLLELLTGKQPSQHPYLEPREVPDWVRATREEEEGGERHKLSMLIEVATIASFTSPEQRPEMWQVLQMIQEIKECLMTED 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15525844 15528313 + Bma029082.1 Bma09g00270 88316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00270 646 Gene3D Ribonuclease Inhibitor 42 199 IPR032675 -
Bma09g00270 646 Pfam Leucine rich repeat 131 188 IPR001611 GO:0005515
Bma09g00270 646 SUPERFAMILY Protein kinase-like (PK-like) 385 639 IPR011009 -
Bma09g00270 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 646 - -
Bma09g00270 646 Gene3D Ribonuclease Inhibitor 200 248 IPR032675 -
Bma09g00270 646 Gene3D Transferase(Phosphotransferase) domain 1 460 645 - -
Bma09g00270 646 Pfam Protein kinase domain 385 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00270 646 ProSiteProfiles Protein kinase domain profile. 381 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00270 646 SUPERFAMILY L domain-like 64 238 - -
Bma09g00270 646 Gene3D Phosphorylase Kinase; domain 1 347 458 - -
Bma09g00270 646 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 17 646 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00270 Bma-Chr9:15525844 Bma14g01626 Bma-Chr14:34297610 6.41E-152 dispersed
Bma09g00270 Bma-Chr9:15525844 Bma15g00054 Bma-Chr15:717575 2.73E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66693 PF00069 Pkinase 1.40E-28 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00270 - - bhj:120074099 748.814