Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00308 ATGGCGGCTTCTCTCTTGCGCCTTCATTTTCATGATTGTTTTGTTAATAGGTGTGATGGGTCAGTGCTGCTTGACGATACCAGCACGTTTAAGGGTGAGAAAGATGCGTTTCCAAATAGGAACTCTGCTCGAGGATTTGAAGTGATCGATTCAATCAAGGCTGACGTTGAGAAAGCATGCATGTCGGTTGTTTCTTGCACAGATATTGTCTCTTTGGCAGCAAGAGATGCTGTTTTTCTTGCTGGAGGTCCTTTCTGGCCTATTCAACTGGGGCGGCGTGATGGAACAAGTGCAAGTGAGGACGATGCCAACGAGCAATTGCCATCACCTTTTGAGAGTTTGGAGGAAATCACTGCAAAATTCAGTTCCAAAGGTCTTGATGTTAAGGATGTAGTTCTACTCTCAGGAGGACACACATTTGGGTATGCCCAGTGCTTCACGTTCAAAAACAGGCTCTTCGACTTCGAACAAACTGGCTCGCCAGATCCGACCCTCGACTCATCGCTACGGCAAAGCCTACAAACCCAATGTCCAGACCTAGACGACTCAGACACCAACTTGGTTGCTTTAGATTCGGTCACAATTAATAGGTTCGACAACGTGTATTTCAAGAACTTGGTCAACAACTCTGGGCTTCTGAAGTCAGACCAAGTTCTCATGGGAGACAACACCACAGCTTCAATGGTCGTCTACTACAGCAGGTTTCCTGCTCAGTTTATGAAAGATTTCGCTGTATCAATGGCGAAGATGGCTAACATAGGTGTTCTTACGGGTCAGAATGGAGAAATCAGGAAGAACTGCAGGATGGTTAACAAGAACATCTACTATCCATGA 834 45.8 MAASLLRLHFHDCFVNRCDGSVLLDDTSTFKGEKDAFPNRNSARGFEVIDSIKADVEKACMSVVSCTDIVSLAARDAVFLAGGPFWPIQLGRRDGTSASEDDANEQLPSPFESLEEITAKFSSKGLDVKDVVLLSGGHTFGYAQCFTFKNRLFDFEQTGSPDPTLDSSLRQSLQTQCPDLDDSDTNLVALDSVTINRFDNVYFKNLVNNSGLLKSDQVLMGDNTTASMVVYYSRFPAQFMKDFAVSMAKMANIGVLTGQNGEIRKNCRMVNKNIYYP 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 25691534 25692952 - Bma029183.1 Bma09g00308 88354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00308 277 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Bma09g00308 277 SUPERFAMILY Heme-dependent peroxidases 1 271 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 205 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 245 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PANTHER PEROXIDASE 72-RELATED 1 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Bma09g00308 277 Gene3D - 1 271 - -
Bma09g00308 277 PANTHER PEROXIDASE 1 270 - -
Bma09g00308 277 ProSiteProfiles Plant heme peroxidase family profile. 1 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 CDD secretory_peroxidase 1 270 IPR033905 GO:0004601|GO:0042744
Bma09g00308 277 Gene3D Peroxidase, domain 2 108 250 - -
Bma09g00308 277 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma09g00308 277 Pfam Peroxidase 1 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00308 Bma-Chr9:25691534 Bma15g00880 Bma-Chr15:29396588 3.19E-164 dispersed
Bma09g00308 Bma-Chr9:25691534 Bma07g00045 Bma-Chr7:1368583 7.85E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00308 K00430 - cit:102608175 418.313