Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00311 ATGGGGTGGTTATCTAACATTTCTTTTTCTTCTGCGAATTCCTCCCCGGTAGTTCGATCTTCTGGAAGTGGGGGTGAGTCTCCGAGGAGGAGAAGGAGCAGCAGTAGTGATGATCATAATTACAGAGGCGCCTGGCGTTTTGGAACCTCCAAGAATGGGCGCGGGAGGAAGTTTCGGAATCTGAGCGACAGGGACTGTCATAGTGGTTCTTCGCCCAAGTGGTCGGACTCGCCGGCCGATTCGTCGTCAGATTCCTTGTCTGTGATCCAGTCTTCTAGCAGCTGTAATCAAGCTGTGCCGCTCCCGCTCCCGGAGTGTTCTGGAGTTTGCCGGCGTACCGATGGGCTGTTGAATTCAAGTTCTGGCGATGCTGACTGCCCGCTTCCTTCGCCCAAGGCTGGCCTTATCAAAGGCGTGGAGGAGCGGGATAGATGCAGAGAGAAAGCAACATGTAAAATTGGGGATGAAGATCTGTCCGACTTTGGTATTAAAAGTGTGTTTGATTGTCGGAAGAGGCAAACGAAGAAGGATCGTGATGAAATGAGGTCATCTAGGACGGTTCATCAACAGCTGAATGGTTATTCGGAGACTCAAGACAATTTCAGGGTTGATGTTCCCATAAGGAGCGCTCCAACTAGCCCCTTCTCGAGTCCTATTATGAGTCCCCAAAGAACAAGTAGGAGTGGTGATTTATTTTATAAATGGGTTCCCACTGGAAATCAAGTTTGGTCTGCACCCGAGATGCCTATCTCAACAATGGTTCCAGGCTTGCCACCTCCTGCTTTCTTTGACTGCTATCCATTCAGTACTGATAACTCCCCCATTCAAAGTCCTCGAGTAAGAAGTCCTCATCGAGACCCCAGAAGCCCGACTGGAGCTACATCACCATTGCACACCAAGAGGTCTCTTGAAAGCCCAAGTGGCGCTGCCTCCCCAATGCATCCAAAACTATCTCTTGAAGCAACGACAGTACGTCGTGAAAGTACTAGTCCTGTAAATGTCCATCCACTACCCCTTCCTCCAGGGGCACCGCTCCCTTCACCAACTCCAGTTTCCCAAGTTACAGCTAAACCTGATACGTTATCAATGAAAAGCCAGTGGCAGAAAGGAAAGCTCATTGGGCGTGGCACATTTGGAAGTGTTTACGTAGCTAGTAACAGAAAAAATGGGTCTCTATGTGCAATGAAGGAAGTGGAATTATTTCCTGATGACCCAAAATCTGCAGAATGCATAAAGCAGTTAGAACAGGAAATCAAAGTTCTCAGCCAATTAAAGCATCCAAATATTGTTCAATATTATGGTAGTGAAATTGTTGACGATCGGTTTTACATATACTTAGAGTATGTTCATCCTGGTTCAATAAATAAATATGTTCGAGAGCATTGTGGTGCTATGACAGAGTCTGTTGTACAAAATTTCACTCGCCATATTCTCTCCGGATTGGCTTACTTGCACAGCACAAAGACCATACACCGTGATATTAAGGGAGCTAATTTACTTGTCGACTCTAGTGGGGTTGTCAAACTTGCAGACTTTGGGATGGCCAAACATCTTACTGGACAAGCTGCTGATCTCTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTCATGCAGGCTGTTATGCAGAAAGATAACAATTCTGATCTTGCTCTAGCAGTTGATATATGGAGTCTGGGCTGTACTATTATTGAAATGCTGACGGGAAAACCTCCTTGGAGTGAATACGAAGGAGCTGCAGCTATGTTTAAGGTTATGAGAGATACTCCTCCCATACCTGAGTCGTTGTCACCCGAGGGCAAAGATTTCTTAAGATGCTGCTTTCAAAGAAATCCTGCAGATAGGCATTCTGCCATCATGCTTCTCGAACACCGATTCGTGAAGATTTCACTCCAGCCAGATGTCTCATCTTGTACACAAGCGCTTAGCATGACGAATTTGATGGTAAACATACTACACAGTTCATTTCGCTAA 1977 46.23 MGWLSNISFSSANSSPVVRSSGSGGESPRRRRSSSSDDHNYRGAWRFGTSKNGRGRKFRNLSDRDCHSGSSPKWSDSPADSSSDSLSVIQSSSSCNQAVPLPLPECSGVCRRTDGLLNSSSGDADCPLPSPKAGLIKGVEERDRCREKATCKIGDEDLSDFGIKSVFDCRKRQTKKDRDEMRSSRTVHQQLNGYSETQDNFRVDVPIRSAPTSPFSSPIMSPQRTSRSGDLFYKWVPTGNQVWSAPEMPISTMVPGLPPPAFFDCYPFSTDNSPIQSPRVRSPHRDPRSPTGATSPLHTKRSLESPSGAASPMHPKLSLEATTVRRESTSPVNVHPLPLPPGAPLPSPTPVSQVTAKPDTLSMKSQWQKGKLIGRGTFGSVYVASNRKNGSLCAMKEVELFPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIVDDRFYIYLEYVHPGSINKYVREHCGAMTESVVQNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQAADLSLKGSPYWMAPELMQAVMQKDNNSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMRDTPPIPESLSPEGKDFLRCCFQRNPADRHSAIMLLEHRFVKISLQPDVSSCTQALSMTNLMVNILHSSFR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 26141328 26149520 - Bma029191.1 Bma09g00311 88357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00311 658 SUPERFAMILY Protein kinase-like (PK-like) 352 633 IPR011009 -
Bma09g00311 658 MobiDBLite consensus disorder prediction 1 22 - -
Bma09g00311 658 MobiDBLite consensus disorder prediction 334 348 - -
Bma09g00311 658 MobiDBLite consensus disorder prediction 273 355 - -
Bma09g00311 658 MobiDBLite consensus disorder prediction 1 88 - -
Bma09g00311 658 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 651 - -
Bma09g00311 658 ProSiteProfiles Protein kinase domain profile. 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00311 658 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Bma09g00311 658 MobiDBLite consensus disorder prediction 71 88 - -
Bma09g00311 658 MobiDBLite consensus disorder prediction 288 306 - -
Bma09g00311 658 MobiDBLite consensus disorder prediction 56 70 - -
Bma09g00311 658 Pfam Protein kinase domain 368 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00311 658 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 651 - -
Bma09g00311 658 Gene3D Transferase(Phosphotransferase) domain 1 363 651 - -
Bma09g00311 658 SMART serkin_6 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00396 Bma09g00311 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00311 Bma-Chr9:26141328 Bma15g00785 Bma-Chr15:16763102 7.73E-112 dispersed
Bma13g00112 Bma-Chr13:1170563 Bma09g00311 Bma-Chr9:26141328 1.14E-53 dispersed
Bma09g00311 Bma-Chr9:26141328 Bma01g02638 Bma-Chr1:83891178 2.37E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66694 PF00069 Pkinase 9.80E-67 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00311 - - cmax:111478157 740.339