Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00327 ATGTTTCTTCCGCTTATAATTACAATTTTTATAGTCTCTGCAACTACCGTTGAATGCGCAAATTCAACGAGCTGCAATAGCGGAAAATCAGCAAAACCTGTTCCCTATCCGTTTGGATTCGCACAATCGAACTTAATCCGATTAAATTGCACGAATGGAGATATTAAGATCGGGGAATTTGTCGTGCGGAGCTTTTCCGCCGATAGTATCCTCGTAAATGTTCCTGCACTATGCAACCGTTCAATCCAGTCAGTTTCATCACTTTTTGGGAAGAACTTTTGGCCAACAAATCGCAACAATCTTCTTCTCCAAGGTTGCAATTCCCCTGGAAGTTGCCCGTTACCTACAACTCTCTTACCCGACCAAAATCTGTCGGCCAACTGCGATGCGAAGAACCATAATGTGACCTGCTTCTTTCAGAATATTACAGGAAGAGGTTTCTTTATCTCGGAATTGAACCAGAATCATTGCCAGTGGCTCTACTCATCAATTATCATCAATTCAGAGTTGAACTCACTCGCCTTAGAGGCCATTGAATTACAGTGGTGGCTCGAAGGAGCCTGCAAATGCTCAAATAACGCAATTCTTTCTGACATTTCACTTCCAACTGGGAATTTCGGGTGCCGGTGCAATTGCCGAGAAGGGTATGAAGGAGACGGCTATGCGGACGGCAAGGGTTGCCGGAGGATAGATTCTGGATGCAATGCTCAGGGCATGTCTGAAGAATGTGGAGGAAAAATTAACGTTGGGACTCTAGTTGGAGGTATAATGGCTGGTGCTTTTCTGGTGGCTGGTCTTGCCCTCGTTTGTTATTTGATACGCCGGCGGGTTTCTTGTATGAAAAATCAAATGAGTGCACAGCGACTTGTGTCTGAAGCAGCTCGGCACTCCACCATTCCCATTTACTCCTTCAAGGAAATAGAACGAGCCACTAATGGCTTCTCTGAGAAACAAAGGCTCGGAACTGGAGCCTTTGGCACTGTTTATGCCGGAAAAATTTTTAATGACCACTGGGTTGCCATAAAGAGAATCAAATACAGAGACCATAATAGTATTGGCCAAGTCATGAATGAGATTCGGCTTCTTTCGTGCGTGAGCCACCCCAATCTAGTCCGCCTCTTAGGCTGCTCCATTGAGGAAGGCCAACAGATACTTGTCTATGAGTTTATGCCTAATGGAACTTTATCTCAGCACCTTCAAAGAGAGAAAGGAAGCGTGCTTCCATGGACTACTCGCCTCACCATTGCTGCCGAAACTGCTCGTGCAATAGCGTATCTTCATTCTGCCATGCACCCTCCGATTTATCACAGAGACATTAAATCCAGCAACATTCTTTTGGACTATAACTTCAAATCAAAGGTTGCTGATTTTGGTCTTTCTAGACTTGGCATTACCGAATCATCACACATCTCTACAGCCCCTCAAGGGACTCCAGGCTATCTTGATCCGCAGTACCATCAGAATTTTCATCTTTCGGATAAAAGTGATGTTTACAGTTTTGGAGTTGTTCTTTTAGAGATCATTACTGCCATGAAAGTGGTTGATTTTACTCGGCCTCAAGGCGATGTGACATTAGCTGCACTTGCCATCGATCGGATTGGCCGAGGTTGTGTGGATGAATTAATAGACCCATTCCTCGAGCCGAACAGGGATGCCTGGACACTTTATTCTGTCCACAAGGTGGCTGAACTTGCATTTCGATGCTTGGCTTTCCACAGCGAAACGAGGCCGACTATGATGGAAGTGGCAGAGGAGCTCGAAATGATCAGGCACAGTGGGTGGGCAACACTGGAAGAAACTATATGCGTAGCATCATCACTAGGATCCACAAGTTCATCGCCACGTAATGGAAGTGAAAAATCAATGAGTGGATCGATGGTTAAGAGGGCAGGATTAGGGAGTCAGATCTTGATTGTCCCACCGCAAAACTACAATGGCGATTTCTCTCGGGCTTCCATGGAAGAGGTTACAGATAGCTCTCCTGTTTCTGTACAAGATCCTTGGTTCAGTGAGCAAAGCTCGCCTTCAACGAATAGTTTGTTGGGTAATGTGATTCATTGA 2061 45.27 MFLPLIITIFIVSATTVECANSTSCNSGKSAKPVPYPFGFAQSNLIRLNCTNGDIKIGEFVVRSFSADSILVNVPALCNRSIQSVSSLFGKNFWPTNRNNLLLQGCNSPGSCPLPTTLLPDQNLSANCDAKNHNVTCFFQNITGRGFFISELNQNHCQWLYSSIIINSELNSLALEAIELQWWLEGACKCSNNAILSDISLPTGNFGCRCNCREGYEGDGYADGKGCRRIDSGCNAQGMSEECGGKINVGTLVGGIMAGAFLVAGLALVCYLIRRRVSCMKNQMSAQRLVSEAARHSTIPIYSFKEIERATNGFSEKQRLGTGAFGTVYAGKIFNDHWVAIKRIKYRDHNSIGQVMNEIRLLSCVSHPNLVRLLGCSIEEGQQILVYEFMPNGTLSQHLQREKGSVLPWTTRLTIAAETARAIAYLHSAMHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGITESSHISTAPQGTPGYLDPQYHQNFHLSDKSDVYSFGVVLLEIITAMKVVDFTRPQGDVTLAALAIDRIGRGCVDELIDPFLEPNRDAWTLYSVHKVAELAFRCLAFHSETRPTMMEVAEELEMIRHSGWATLEETICVASSLGSTSSSPRNGSEKSMSGSMVKRAGLGSQILIVPPQNYNGDFSRASMEEVTDSSPVSVQDPWFSEQSSPSTNSLLGNVIH 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 28302473 28306136 + Bma029222.1 Bma09g00327 88373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00327 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Bma09g00327 686 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00327 686 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Bma09g00327 686 Pfam Protein kinase domain 314 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00327 686 Gene3D Transferase(Phosphotransferase) domain 1 390 601 - -
Bma09g00327 686 SUPERFAMILY Protein kinase-like (PK-like) 292 589 IPR011009 -
Bma09g00327 686 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 17 625 - -
Bma09g00327 686 MobiDBLite consensus disorder prediction 655 686 - -
Bma09g00327 686 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 625 IPR045274 GO:0007166
Bma09g00327 686 Gene3D Phosphorylase Kinase; domain 1 275 389 - -
Bma09g00327 686 SMART serkin_6 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00774 Bma-Chr1:7119566 Bma09g00327 Bma-Chr9:28302473 0 dispersed
Bma01g01974 Bma-Chr1:73570263 Bma09g00327 Bma-Chr9:28302473 2.88E-89 dispersed
Bma09g00327 Bma-Chr9:28302473 Bma14g01106 Bma-Chr14:13884990 2.16E-83 dispersed
Bma09g00327 Bma-Chr9:28302473 Bma03g00899 Bma-Chr3:8936250 3.58E-86 transposed
Bma09g00327 Bma-Chr9:28302473 Bma01g01132 Bma-Chr1:11959396 3.67E-82 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66695 PF00069 Pkinase 5.50E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00327 - - pmum:103340007 837.025