Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00341 | CAGGACACAATTGTTGGATTTCTACTAGCTGGAGTAGGTAATAATGACCTGAGGAGAAAAACAAATTACCTTATTGTGGACTCAAAAACAACTGTTAAACAAATTGAAGATGCCTTCAAGGAGTTCACAATAAGGGAGGATATTGCTGCAGTGCTTGTCAGCCAATACGTTGCAAACATGATGAGGTTTTTGGTGGACAGCTACAACAAGCCAATTCCAGTAATTCTGGAGATTCCTTCTAAAAATCATCCTTATGATCCCACTCAAGACTTCATCCTATCACGAGTGAAGAATCTCTTTTCTGCCGAGTCGGTGGCATCCAGTAGGCGTTGA | 333 | 41.14 | QDTIVGFLLAGVGNNDLRRKTNYLIVDSKTTVKQIEDAFKEFTIREDIAAVLVSQYVANMMRFLVDSYNKPIPVILEIPSKNHPYDPTQDFILSRVKNLFSAESVASSRR | 110 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 29742307 | 29743537 | + | Bma029246.1 | Bma09g00341 | 88387 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00341 | 110 | SUPERFAMILY | AtpF-like | 2 | 99 | IPR036906 | GO:0034220 | |
Bma09g00341 | 110 | TIGRFAM | V_ATP_synt_F: V-type ATPase, F subunit | 2 | 104 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Bma09g00341 | 110 | PIRSF | V-ATP_synth_F | 1 | 103 | IPR005772 | GO:0033180|GO:0046961|GO:1902600 | |
Bma09g00341 | 110 | Gene3D | ATPase, V1 complex, subunit F | 1 | 102 | IPR036906 | GO:0034220 | |
Bma09g00341 | 110 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT F | 2 | 110 | - | - | |
Bma09g00341 | 110 | Pfam | ATP synthase (F/14-kDa) subunit | 1 | 96 | IPR008218 | GO:0034220|GO:0046961 | |
Bma09g00341 | 110 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT F | 2 | 110 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma09g00341 | Bma-Chr9:29742307 | Bma09g00345 | Bma-Chr9:30173426 | 1.57E-49 | dispersed | |
Bma09g00341 | Bma-Chr9:29742307 | Bma09g00344 | Bma-Chr9:30157382 | 3.11E-72 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00341 | K02151 | - | tcc:18613243 | 190.274 |