Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00344 ATGGCCAACAAAGCTCCAATCTCCACTACCAACTCTGCACTTATTGCCATGATAGCTGATGAAGACACCGTTGTTGGATTTCTACTGGCTGGAGTAGGTAATGTTGACCTGAGGAGAAAGACAAATTACCTTATTGTGGACTCAAAAACAACTGTTAAACAAATTGAAGATGCCTTCAAGGAGTTCACAACAAGGGAGGATATTGCTGTAGTGCTTATCAGCCAATATGTTGCAAACATGATGAGGTTTTTGGTGGACAGCTACAACAAGCCAATTCCAGCAATTCTGGAGATTCCTTCTAAAAATCATCCTTATGATCCCACTCAAGACTCCATCCTATCACGAGTGAAGAATCTCTTTTCTGCCGAGTCGGTGGCATCCGGTAGGCGATGA 393 43.0 MANKAPISTTNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAVVLISQYVANMMRFLVDSYNKPIPAILEIPSKNHPYDPTQDSILSRVKNLFSAESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 30157382 30159231 + Bma029256.1 Bma09g00344 88390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00344 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Bma09g00344 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Bma09g00344 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Bma09g00344 130 SUPERFAMILY AtpF-like 15 118 IPR036906 GO:0034220
Bma09g00344 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Bma09g00344 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 10 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Bma09g00344 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00341 Bma-Chr9:29742307 Bma09g00344 Bma-Chr9:30157382 3.11E-72 proximal
Bma09g00344 Bma-Chr9:30157382 Bma09g00345 Bma-Chr9:30173426 1.71E-52 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00344 K02151 - pop:7454320 232.261