Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00376 ATGGAAGATGAACACATAAGAATAGATGATCTATCATCACATTTAGGACCACTCTTCCAGTTTCCCAACCCAAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGACATGAAGCTTCGTCCTTTATGAGAAAAAATGTGATGAGACTCTTTTTTAAAGAAAATTTTCCCCATACTCTACGAGAAGTCGATGAGAATTTTTCAGAAGAACTCATGGGCTGTTTCCGCAGAGCATTTCTTCTGGCTGATCAAGCTTTGGCTGATGACTCTACTGTGAAAAAATCTTCTGGAACTACAGCTCTGACTGCTCTTGTACTCGGAGGGCTTCTAATGGTGGCAAATGCCGGTGATTGCCGAGCCGTTCTTTCGAGGAAAGGAGAAGCAATAGACTTGTCTGAAGATCACAGGCCGATTTACCCACCGGAACGAACCCGAATCGAAGAATCTGGCGGCTTTATCGAAGATGGGTATCTAAACGGGGTTTTATCCGTTTCTAGAGCGTTAGGGGACTGGGACGTGAAATCCCCTTATGGGTCATCACCTTCTCCGCTCATAGCCGAACCGGAGTGCAGACAAATGGTTTTAACAGAAGAAGACGAGTTTCTAATCATAGCCTGTGACGGGATTTGGGATGTTATGTCTAGTCAGCACGCAGTAAATATCGTTAAACGGGGGCTGAGCCGGTACGCTGACCTCGACCGGTGTGCTCGGGACCTAGTCAGGGCGGCTCTACGGCTCCATACTTTTGATAATCTCACTGTGGTGGTGGTCTGCTTTTCTCATCACTTTGCCAGCCCCAGCCAGCCCTCTCGGCCACAGAGGTTGAAACACTGCAACCTCACCGAAGAGGCGATTTGCAGCCTGAAGAGATGGCTGGACAGCTGTGACAGCCATTGA 897 47.94 MEDEHIRIDDLSSHLGPLFQFPNPSAFYGVFDGHGGHEASSFMRKNVMRLFFKENFPHTLREVDENFSEELMGCFRRAFLLADQALADDSTVKKSSGTTALTALVLGGLLMVANAGDCRAVLSRKGEAIDLSEDHRPIYPPERTRIEESGGFIEDGYLNGVLSVSRALGDWDVKSPYGSSPSPLIAEPECRQMVLTEEDEFLIIACDGIWDVMSSQHAVNIVKRGLSRYADLDRCARDLVRAALRLHTFDNLTVVVVCFSHHFASPSQPSRPQRLKHCNLTEEAICSLKRWLDSCDSH 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 32498586 32499662 - Bma029321.1 Bma09g00376 88422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00376 298 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
Bma09g00376 298 CDD PP2Cc 1 259 IPR001932 -
Bma09g00376 298 PANTHER PROTEIN PHOSPHATASE 2C 1 277 IPR015655 GO:0004722|GO:0006470
Bma09g00376 298 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 277 - -
Bma09g00376 298 ProSiteProfiles PPM-type phosphatase domain profile. 1 259 IPR001932 -
Bma09g00376 298 SMART PP2C_SIG_2 3 259 IPR001932 -
Bma09g00376 298 Gene3D - 1 265 IPR036457 -
Bma09g00376 298 SUPERFAMILY PP2C-like 1 260 IPR036457 -
Bma09g00376 298 Pfam Protein phosphatase 2C 1 251 IPR001932 -
Bma09g00376 298 SMART PP2C_4 2 257 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00376 Bma13g00101 CCT
Bma09g00376 Bma13g00101 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00376 Bma-Chr9:32498586 Bma13g00101 Bma-Chr13:1054087 3.29E-130 dispersed
Bma09g00376 Bma-Chr9:32498586 Bma04g00294 Bma-Chr4:2356598 5.93E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00376 K14803 - csv:101216626 398.667