Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00376 | ATGGAAGATGAACACATAAGAATAGATGATCTATCATCACATTTAGGACCACTCTTCCAGTTTCCCAACCCAAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGACATGAAGCTTCGTCCTTTATGAGAAAAAATGTGATGAGACTCTTTTTTAAAGAAAATTTTCCCCATACTCTACGAGAAGTCGATGAGAATTTTTCAGAAGAACTCATGGGCTGTTTCCGCAGAGCATTTCTTCTGGCTGATCAAGCTTTGGCTGATGACTCTACTGTGAAAAAATCTTCTGGAACTACAGCTCTGACTGCTCTTGTACTCGGAGGGCTTCTAATGGTGGCAAATGCCGGTGATTGCCGAGCCGTTCTTTCGAGGAAAGGAGAAGCAATAGACTTGTCTGAAGATCACAGGCCGATTTACCCACCGGAACGAACCCGAATCGAAGAATCTGGCGGCTTTATCGAAGATGGGTATCTAAACGGGGTTTTATCCGTTTCTAGAGCGTTAGGGGACTGGGACGTGAAATCCCCTTATGGGTCATCACCTTCTCCGCTCATAGCCGAACCGGAGTGCAGACAAATGGTTTTAACAGAAGAAGACGAGTTTCTAATCATAGCCTGTGACGGGATTTGGGATGTTATGTCTAGTCAGCACGCAGTAAATATCGTTAAACGGGGGCTGAGCCGGTACGCTGACCTCGACCGGTGTGCTCGGGACCTAGTCAGGGCGGCTCTACGGCTCCATACTTTTGATAATCTCACTGTGGTGGTGGTCTGCTTTTCTCATCACTTTGCCAGCCCCAGCCAGCCCTCTCGGCCACAGAGGTTGAAACACTGCAACCTCACCGAAGAGGCGATTTGCAGCCTGAAGAGATGGCTGGACAGCTGTGACAGCCATTGA | 897 | 47.94 | MEDEHIRIDDLSSHLGPLFQFPNPSAFYGVFDGHGGHEASSFMRKNVMRLFFKENFPHTLREVDENFSEELMGCFRRAFLLADQALADDSTVKKSSGTTALTALVLGGLLMVANAGDCRAVLSRKGEAIDLSEDHRPIYPPERTRIEESGGFIEDGYLNGVLSVSRALGDWDVKSPYGSSPSPLIAEPECRQMVLTEEDEFLIIACDGIWDVMSSQHAVNIVKRGLSRYADLDRCARDLVRAALRLHTFDNLTVVVVCFSHHFASPSQPSRPQRLKHCNLTEEAICSLKRWLDSCDSH | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 32498586 | 32499662 | - | Bma029321.1 | Bma09g00376 | 88422 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00376 | 298 | ProSitePatterns | PPM-type phosphatase domain signature. | 27 | 35 | IPR000222 | GO:0043169 | |
Bma09g00376 | 298 | CDD | PP2Cc | 1 | 259 | IPR001932 | - | |
Bma09g00376 | 298 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 277 | IPR015655 | GO:0004722|GO:0006470 | |
Bma09g00376 | 298 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 277 | - | - | |
Bma09g00376 | 298 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 259 | IPR001932 | - | |
Bma09g00376 | 298 | SMART | PP2C_SIG_2 | 3 | 259 | IPR001932 | - | |
Bma09g00376 | 298 | Gene3D | - | 1 | 265 | IPR036457 | - | |
Bma09g00376 | 298 | SUPERFAMILY | PP2C-like | 1 | 260 | IPR036457 | - | |
Bma09g00376 | 298 | Pfam | Protein phosphatase 2C | 1 | 251 | IPR001932 | - | |
Bma09g00376 | 298 | SMART | PP2C_4 | 2 | 257 | IPR001932 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma09g00376 | Bma13g00101 | CCT | |
Bma09g00376 | Bma13g00101 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma09g00376 | Bma-Chr9:32498586 | Bma13g00101 | Bma-Chr13:1054087 | 3.29E-130 | dispersed | |
Bma09g00376 | Bma-Chr9:32498586 | Bma04g00294 | Bma-Chr4:2356598 | 5.93E-95 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00376 | K14803 | - | csv:101216626 | 398.667 |