Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00404 ATGGTATTTTCTGGTTCAGAAGAAGACGGTGCTTGCCCTGCAGAGCCTCCGGATCCCGACATTGTAGAATTTGACCCAACTTGCCGCTATATTAGGTACAAAGATGTGCTCGGGAAAGGTGCTTTCAAGACAGTATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATTGATGAGGTTCTACAGTCTCCAGATGACTTAGAAAGGTTATACTCAGAAGTGCACCTCTTAAAGTCCTTGAAGCATAACAACGTTGTGAGATTTTACAATTCATGGATCGATGATAAGAACAAGACCGTTAATATTATTACTGAGTTGTTCACATCTGGAAGCCTCAGACAGTATTGTAAGAAACACAAAAAGGTTGACGTGAAGGCAGTGAAGGGATGGGCAAGACAGATTCTGATGGGTTTGAACTACCTCCACGGTCATAATCCACCAATTATACATAGGGACCTGAAGTGCGATAACATATTTATCAATGGTAATCAAGGAGAAGTAAAGATTGGCGATCTTGGGTTGGCAACTATTATGCAGCACGGAACTGCTAAAAGTGTAATTGGCACACCTGAGTTTATGGCTCCTGAACTTTATGATGAAAATTACAATGAGTTGGCTGATATTTATTCTTTTGGGATGTGCATGCTGGAGATGGTGACTTTTGAATACCCTTACAGTGAGTGCAGAAACTCGGCTCAAATATACAAGAAGGTTACTTCTGGTATAAAGCCTGCTGCTCTCTCTAAAGTGAAAGATCAAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCATCAGAAAGATCTTCTGCGAAGGAACTTCTAATGGATCCTTTTCTTCAAGCTAATGGATCAACAAAATTTCGTCCTCTGCCACTCCCAGATATCGTTCTTCCCAAATTTGGAACCTTTGGAGACCGTTGTCTTATGTCAGAAGGACCTGCGACTTCACGAAATGCACCAACTTCCATGGATGTAAATAACGAGGGCGAGCCACCTATCATTACTTCTTTTGACACTTCAGTTGATGGGGATTCCCATTCTCTGTCTGTGGAGGTTAAAAGGACAAAGAGGGGCAATGTCTTCTTGTTGAAAGGGGAACGAAACGACGAGAACTCCATCTCTCTGATACTTCAGATAGCCGATCAAAATGGTCGTGCTCGAAATATCCATTTTATATTCTACCTCGACAGTGACACAGCTGTCTCTCTTTCAAGTGAAATGGTAGAACAGCTAGAACTGCCAGACCAAAATGTTATGCTCGTAGCAGAATTGATTGATTTGCTGCTAGTAAACCTAATTCCCAGTTGGAAGCCTTGTGTTCGCATAGAGCATTTGGTCGCCGAAAATAGAATAAGAGCTTCGAAAGACAATGGAAAAGATCTTTCATCGCAAAAACAAAAGGATGAAAACGTGTTGTTATCGAAGGCACATGAGCCTGGAAATCCGTCATCCTCGCTAGCCCTCCCCTATTCTTCCTTGTCGGATGCATTAAGTCAAGCAATGCCAGAAAAGTTGGAGAATCCTAAATCCGATCTTATTAGATCTCATTCGTACGGTTGCTTACGTGGTGAAACAAGTGCAGATGATAGATTTTCCGAAATGTCTTATGTTTCTGCAACCTCTAATGAGTGCAGCGAGAGGAACTGGTCAGTCGATTCATTCATGTCGTTTGAATCTGGATTGATGGATTCCAATCGATGTGGATCACAAAGAGCTTCAGGGGTCATAACTCCATATTTGACTGATATGGTTGGATTGCCCGAAATCAAGAACGGGGTATTGGAAATTGGAAGGAACAGCTTGCTTTCCTCCCGTGGTTTTCCGACTGATGGTTCGTGCTTGTCTGATCAGGTGGAAGAGGAGATGAGAACTGAGTTGGAGATAATTGAACTGCAGTTCCAGGAGGCAATGAGGGAGATGTGCAAGAAAAGACACGAAGCCATCATGGAGGCAAGAAAAAGGTTGTATAAGAAAAATATAGAGACGTTTTCTTAG 2022 41.99 MVFSGSEEDGACPAEPPDPDIVEFDPTCRYIRYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNVVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKKVDVKAVKGWARQILMGLNYLHGHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATIMQHGTAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDQDMKQFIEKCLVPASERSSAKELLMDPFLQANGSTKFRPLPLPDIVLPKFGTFGDRCLMSEGPATSRNAPTSMDVNNEGEPPIITSFDTSVDGDSHSLSVEVKRTKRGNVFLLKGERNDENSISLILQIADQNGRARNIHFIFYLDSDTAVSLSSEMVEQLELPDQNVMLVAELIDLLLVNLIPSWKPCVRIEHLVAENRIRASKDNGKDLSSQKQKDENVLLSKAHEPGNPSSSLALPYSSLSDALSQAMPEKLENPKSDLIRSHSYGCLRGETSADDRFSEMSYVSATSNECSERNWSVDSFMSFESGLMDSNRCGSQRASGVITPYLTDMVGLPEIKNGVLEIGRNSLLSSRGFPTDGSCLSDQVEEEMRTELEIIELQFQEAMREMCKKRHEAIMEARKRLYKKNIETFS 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34113175 34116138 - Bma029367.2 Bma09g00404 88450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00404 673 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00404 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 670 - -
Bma09g00404 673 CDD STKc_WNK 29 288 - -
Bma09g00404 673 Coils Coil 628 648 - -
Bma09g00404 673 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Bma09g00404 673 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00404 673 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
Bma09g00404 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bma09g00404 673 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00404 673 SUPERFAMILY Protein kinase-like (PK-like) 33 345 IPR011009 -
Bma09g00404 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00570 Bma-Chr6:30651802 Bma09g00404 Bma-Chr9:34113175 0 dispersed
Bma06g00573 Bma-Chr6:30802840 Bma09g00404 Bma-Chr9:34113175 0 dispersed
Bma02g01110 Bma-Chr2:52807160 Bma09g00404 Bma-Chr9:34113175 0 transposed
Bma03g00765 Bma-Chr3:7005179 Bma09g00404 Bma-Chr9:34113175 1.74E-167 transposed
Bma07g00052 Bma-Chr7:1400652 Bma09g00404 Bma-Chr9:34113175 1.13E-114 transposed
Bma07g01270 Bma-Chr7:48260017 Bma09g00404 Bma-Chr9:34113175 2.85E-116 transposed
Bma15g00813 Bma-Chr15:19480611 Bma09g00404 Bma-Chr9:34113175 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66697 PF00069 Pkinase 6.50E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00404 K08867 - vvi:100259251 829.706