Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00443 ATGTTTGATAAGGCAGAACGAAGTGGATCGTCGAGAAGGCATACATTTAATGCCGGCATTGACAATGAGGATTCTCTTCTGCGCAGCTCTTCGGCTACTTCTAATGGCGATGGATATGACAGTGATGGTTCCAATTTCGCACCTCCTACTCCTACGACCATATCAATCTCACTTCCAGCAGAACTAGCCAGTGCTATACCCTTGATTGATAAATTCCAGGTAGAGGGTTTCTTAAGACTAATGCATAAGCAAATCCATTCAGCTGGAAAACGTGGATTTTTCTCTAAGAAGTCTTCAGGCCCTCCAGTTCGAGAAAAATACACATTTGAAGACATGCTGTGTTTTCAAAAGGATCCTATACCAACATCAATGCTTAAGATTAATGGCGATCTGGTTAATCGTGCTACAAAGCTATTCCAAATAATATTGAAGTACATTGGATCTGATGCTTCTGATAGAGGTCCAGCAACTTGGGATGAACGGATTGATCTTGTTGGTAAATTGTATAAGCAAACCTTGAAGCATTCAGAACTCCGAGATGAACTATTTGTTCAAATTTCAAAACAAACTAGAAATTGTCCTGATAGGCAATACTCGATCAAAGCATGGGAGTTAATGTGTTTGTGTGCATCATCCATGCCTCCAAGCAAGGATATTGGTGGATACTTATCGGAATATGTTCACAATGTAGCGCATAATATGAGTACCGACTGTGAGATTCGAAAGCTCGCAATAAATACATTGAATTCTTTGAAGCATTCTGTGAAGGCTGGTCCTAGGCATACTATACCAGCTCGTGAGGAGATTGAAGCTCTTTTAATGGGTCGAAAGCTTACAACTATAGTCTTTTTCTTGGATGAAACTTTTGAAGAAATTACCTACGATATGGCAACCACAGTAGCTGATGCTGTTGAGGAACTTGCCAAGATTATAAAACTGTCAGCATACTCTAGCTTTAGTCTGTTTGAATATCGTAAAGTTGTTAATAGTGCAAAATCACATGACACTGGAAATGAGGAGTTTCTTGGATTGGATGATAATAAATATATTGGAGATTTGTTAGCGGAATTCAGAGCAACAAAGGACAGAAGTAAAGGAGAAATTTTGCACTGCAAGCTAATCTTTAAAAAGAAGCTTTTTCGTGAGTCAGATGAAGCTGTTGTGGACCCAATGTTTGTGCAATTGTCCTATGTTCAACTGCAACATGATTATTTATTGGGCAACTATCCTGTTGGAAGGGATGATGCTGCGCAGTTGTCTTCATTGCAAATGTTAGTTGAGAGTGGGTTCACTAGCACCCCAGAGTCAAGCACAGACTGGAATTCATTCTTAGAAAGATTCCTTCCCAGACAAATTGCAATAACTCGTGCAAAGCATGAGTGGGAACAGGACATTCTTTTCCGTTATAGTTCTTTGGAACACATGACAAAAGATGATGCAAGACAACAATTTCTTCGTATATTGAGAACACTTCCTTACGGCAATTCAGTTTTCTTTAGTGTTCGCAAAATTGATGACCCCATTGGCCTTTTACCTGGACGGATAATTTTGGGAATCAACAAAAGAGGGGTTCATTTTTTCCGTCCAGTTCCGAAGGAATATTTACATTCTGCTGAGTTACGAGACATAATGCAATTTGGTAGCAGTAATACTGCTGTCTTCTTTAAGATGAGAGTTGCTGGAGTACTACACATATTTCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTTGCTCTTCAAACACATATAAATGATGTTATGCTGCGCCGCTACTCGAAAGCCAGATCTGCTGTTAGTAGCTCAATGAATGGGGATCCTCCTGACATTTTTAAGGCACCAAGTCTAGAATTACACCAGAAACAGGTTCAAGATTTGACTAAAGCTGTTCAAGAATCTCAAAGGAATGCTGATAAGTTGTCAAAAGAGATGTACGAACAACAAAAGCAAGAAGCGATAATGCAGAAAGAAATAGAAGACCTGAAAGAATCAGTGAGACATGAGAAGGAAAATTTGGCAGAGGCAATGTCTGAACTTGATAGACTCAGAACACTTTATGATGGAAAAGATAAGGCCCTTCAGGATGCATTACTGGAGAAAAAGAGCATTGAAGCAAGATTGGCCGAGATGAGTACTCTTGTTTCAAAGAATAATTTGAAACAAGATTCAATTGGTGCACAGAATCTGGTGTTGCAAAAGCTTCAAGATGAGTTGAAACTTTGTTCCAAAGAACTAGTTGCATCCAAAGAAACTACTACGAGACTGGTACATGAAAAAGTAAATTTGGAACAAGTGATTACTGGAATTGAGAAGAAGAAACAGGAGGAGATGGACTGTCTTCAGAGAAATTTTGAGCTAGAATGCAGACTCTTGCAGCTTAAGGTGTCAAAACTAGAAAAAAAGCTGGAAGATGTTAATCAAGAATTATCTGTTGCTGAGTCAACTCTTGCAATCAAGAACACAGATATGTTAGCATTGCAAAATAACTTGAAGGAGTTAGAAGATTTGAGGGAAATGAAAGCGGATATTGACCGAAAGAATGAACAAACAAACACCATTATAAAGATGCAAAGGGCCCAACTAGCTGAGTTAGAGGTGCTTTACAAGGAAGAACAAGTTTTAAGGAAACGGTATTTCAATACTATGGAAGATATGAAAGGTAAAATAAGAGTATATTGTCGACTGCGACCTCTTAATGAAAAGGAATTTCTTGAAAAAGAAAAAAATGTGCTCACTTATCTTGATGAATTCACGGTTGAACATCCTTGGAAAGAGGATAAACCTAAGCAACATATATACGACCGCGTATTTGATGGCACTTCCTCTCAAGACGATTATTTTTGTGTAAATACAATGCAGTATTTGGTGCAATCTGCTGTAGATGGATTTAATGTCTCCATATTTGCATATGGTCAAACTGGTTCGGGAAAGACATTCACCATCTATGGATCTGAGACCAATCCTGGAATTACACTCCGAGCAACTGCAGAACTATTTAAAATTTTAAAGCGGGATAGTAACAAGTTTTCTTTTTCATCAAAGGCATACATGGTGGAGTTATACCAGGATACTCTTGTAGACCTTTTATTGCCAAAAAATGCAAAACGATTGAGATTAGAAATAAAGAAAGACACAAAGGGAATGGTGACTGTTGAAAATGTGATGATGACATCCATCTCAACTTTTGAGGAAATGAAAAGTATTATTCACCAAGGATCTGAGCAGAGGCATACAGCTGGAACTCAGATGAACGAAGAAAGCTCAAGATCTCATTTGATACTTTCAATCATTATTGAAAGTACTAATCTTCAGACTCAATCCGTCGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGGTCAGAAAGAGTGAAGAAGTCTGGTTCTTCTGGTAGCCAGCTAAAAGAAGCTCAAAGCATTAACAAATCACTTTCGGCTCTCGGGGATGTTATCAATGCTTTGTCCTCTAATGGTCAACACATACCTTACAGGAATCACAAGTTAACCATGCTAATGAGCGATTCACTCGGTGGCAATGCCAAAACACTTATGTATGCAGCTAGAGTTCGATCAATCATAAACGATCCCAGCAAAAATATTTCATCAAAAGAGGTAGCCCGACTGAGAAAACTGGTGGGCTATTGGAAGGAGCAAGCGGGAAGGAGGGGTAACGAAGAAGATGATCTGGAAGAAATTCGAGAAGAACGAGCAACCAGAGAGAAAGGAGATAGTCGCCACTCGATGTAG 3747 38.96 MFDKAERSGSSRRHTFNAGIDNEDSLLRSSSATSNGDGYDSDGSNFAPPTPTTISISLPAELASAIPLIDKFQVEGFLRLMHKQIHSAGKRGFFSKKSSGPPVREKYTFEDMLCFQKDPIPTSMLKINGDLVNRATKLFQIILKYIGSDASDRGPATWDERIDLVGKLYKQTLKHSELRDELFVQISKQTRNCPDRQYSIKAWELMCLCASSMPPSKDIGGYLSEYVHNVAHNMSTDCEIRKLAINTLNSLKHSVKAGPRHTIPAREEIEALLMGRKLTTIVFFLDETFEEITYDMATTVADAVEELAKIIKLSAYSSFSLFEYRKVVNSAKSHDTGNEEFLGLDDNKYIGDLLAEFRATKDRSKGEILHCKLIFKKKLFRESDEAVVDPMFVQLSYVQLQHDYLLGNYPVGRDDAAQLSSLQMLVESGFTSTPESSTDWNSFLERFLPRQIAITRAKHEWEQDILFRYSSLEHMTKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAVSSSMNGDPPDIFKAPSLELHQKQVQDLTKAVQESQRNADKLSKEMYEQQKQEAIMQKEIEDLKESVRHEKENLAEAMSELDRLRTLYDGKDKALQDALLEKKSIEARLAEMSTLVSKNNLKQDSIGAQNLVLQKLQDELKLCSKELVASKETTTRLVHEKVNLEQVITGIEKKKQEEMDCLQRNFELECRLLQLKVSKLEKKLEDVNQELSVAESTLAIKNTDMLALQNNLKELEDLREMKADIDRKNEQTNTIIKMQRAQLAELEVLYKEEQVLRKRYFNTMEDMKGKIRVYCRLRPLNEKEFLEKEKNVLTYLDEFTVEHPWKEDKPKQHIYDRVFDGTSSQDDYFCVNTMQYLVQSAVDGFNVSIFAYGQTGSGKTFTIYGSETNPGITLRATAELFKILKRDSNKFSFSSKAYMVELYQDTLVDLLLPKNAKRLRLEIKKDTKGMVTVENVMMTSISTFEEMKSIIHQGSEQRHTAGTQMNEESSRSHLILSIIIESTNLQTQSVARGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVINALSSNGQHIPYRNHKLTMLMSDSLGGNAKTLMYAARVRSIINDPSKNISSKEVARLRKLVGYWKEQAGRRGNEEDDLEEIREERATREKGDSRHSM 1248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 38321933 38333633 - Bma029451.1 Bma09g00443 88489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00443 1248 SMART MyTH4_1 115 273 IPR000857 GO:0005856
Bma09g00443 1248 SUPERFAMILY Prismane protein-like 831 892 IPR011254 GO:0003824|GO:0016491
Bma09g00443 1248 PRINTS Kinesin heavy chain signature 1081 1098 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 PRINTS Kinesin heavy chain signature 1112 1130 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 PRINTS Kinesin heavy chain signature 1161 1182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 PRINTS Kinesin heavy chain signature 962 983 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 ProSiteProfiles FERM domain profile. 278 592 IPR000299 GO:0005856
Bma09g00443 1248 SUPERFAMILY Second domain of FERM 376 493 IPR035963 -
Bma09g00443 1248 Gene3D - 496 604 IPR011993 -
Bma09g00443 1248 Gene3D - 390 491 IPR014352 -
Bma09g00443 1248 Pfam Kinesin motor domain 894 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 PANTHER KINESIN-LIKE PROTEIN KLP-3 65 1223 - -
Bma09g00443 1248 Coils Coil 781 849 - -
Bma09g00443 1248 CDD FERM_B-lobe 393 491 IPR019748 -
Bma09g00443 1248 SMART kinesin_4 886 1200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 Gene3D MyTH4 domain 93 274 IPR038185 -
Bma09g00443 1248 Gene3D - 277 381 - -
Bma09g00443 1248 Gene3D Kinesin motor domain 875 1196 IPR036961 -
Bma09g00443 1248 CDD FERM_C_KCBP 495 601 - -
Bma09g00443 1248 ProSiteProfiles Kinesin motor domain profile. 888 1212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma09g00443 1248 ProSiteProfiles MyTH4 domain profile. 115 273 IPR000857 GO:0005856
Bma09g00443 1248 MobiDBLite consensus disorder prediction 12 50 - -
Bma09g00443 1248 ProSitePatterns Kinesin motor domain signature. 1111 1122 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bma09g00443 1248 Coils Coil 693 713 - -
Bma09g00443 1248 MobiDBLite consensus disorder prediction 1217 1248 - -
Bma09g00443 1248 MobiDBLite consensus disorder prediction 1 50 - -
Bma09g00443 1248 Coils Coil 616 685 - -
Bma09g00443 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 888 1221 IPR027417 -
Bma09g00443 1248 PANTHER KINESIN-LIKE PROTEIN 65 1223 - -
Bma09g00443 1248 SUPERFAMILY PH domain-like 498 586 - -
Bma09g00443 1248 Pfam MyTH4 domain 167 271 IPR000857 GO:0005856
Bma09g00443 1248 Pfam FERM central domain 385 498 IPR019748 -
Bma09g00443 1248 Coils Coil 731 751 - -
Bma09g00443 1248 SMART B41_5 274 498 IPR019749 -
Bma09g00443 1248 Gene3D - 1197 1244 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00443 Bma15g00774 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00443 Bma-Chr9:38321933 Bma07g00328 Bma-Chr7:4274710 5.49E-68 dispersed
Bma15g00774 Bma-Chr15:16369849 Bma09g00443 Bma-Chr9:38321933 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00443 - - zju:107424285 1847.79