Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma09g00494 | ATGGCCACCACTGGTAGTCCTGGGGTTGGGTCTTTAGTTTGGTTGGAAGATCCTGAAGTAGCTTGGATTGATGGAGAAGTTTTAGAGGTTAATCGCGAAGATATTAAAGTTCTATGCACCTCCGGGAAAACGGTTGTTGTTAAAGCATCCAGTGTCTATCCAAAGGATGCAGAAGTTCCACCTTGTGGGGTTGATGACATGACAAGGCTTGCTTATTTGCATGAACCAGGAGTCCTTCAAAATTTGAGATTGAGATATGACATCAATGAAATATATACATATACAGGAAATATACTGATTGCCGTAAATCCTTTTAGAAGATTACCTCACCTTTATGATAGCCATATGATGGCACAATATAAAGGGGCAGCCTTTGGTGAGCTGAGTCCACATCCTTTCGCAGTCGCTGATGCAGCATATAGACTTATGAGAAATGATGGAGTAAGTCAATCAATATTGGTTAGTGGAGAGAGTGGGGCAGGTAAAACAGAAAGTACAAAATTGCTAATGCGATATCTTGCTTACATGGGAGGAAGGGCAGCAGCCGAAGGCAGGTCTGTTGAGCAGCAAGTTTTAGAGTCCAATCCTGTTCTAGAAGCATTTGGCAACGCAAAGACTGTTCGGAACAACAACTCAAGTCGCTTCGGTAAGTTTGTCGAAATTCAATTTGATCAAAATGGGAGAATATCAGGAGCTGCTGTAAGAACTTACCTGCTTGAAAGATCACGTGTTTGTCAAGTGTCCGATCCAGAGAGAAATTATCATTGCTTCTACATGCTTTGTGCAGCGCCTCCAGAGGATATTGAGAGGTACAAATTGGGAAACCCAAGAACCTTTCACTATTTGAATCAATCAAATTGCTATGATTTGGACGGAGTTGATGATCGCAAGGAGTATTTTGAAACAAGGAGAGCGATGGATATTGTTGGAATAAGTTCTGAAGAGCAGGATGGGATTTTTCGAGTGGTGGCTGCGATTCTACATCTTGGAAATATTGAGTTTGCAAAAGGGAAGGAAGCCGATTCCTCTGTGCCAAAAGATGAAAAATCTCGGTTCCATCTTAAAACGGCTGCTGAGCTGTTCATGTGTGATGAGAAAGCTTTAGAAGATTCTCTCTGCAAGCGGGTGATTGTCACTCGTGATGAAACCATTACAAAATGTCTGGATCCTACTTCTGCAGTTCTTAGTAGAGATGCTCTGGCTAAAGTTGTGTACTCGAGATTGTTTGACTGGCTTGTGGATAAAATAAACAATTCAATTGGTCAAGATCCAAACTCAAAAGTTTTAATCGGGGTGCTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAACAATTTTGCATCAATTTGACGAATGAGAAGCTTCAGCAACATTTTAATCAGCACGTTTTCAAAATGGAGCAAGAAGAATACACTAAAGAAGAAATTGATTGGAGTTATATTGATTTTGTTGACAATCAAGATATTCTTGATCTTATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTAGATGAAGCATGTATGTTTCCAAGATCAACTCATGAAACATTTGCCCAAAAGCTGTATCAGACTTTCAAAAATCATAATCGCTTTACCAAACCTAAATTAGCACGGAGCGATTTCACTATTTGTCATTATGCCGGTGATGTAACCTATCAAACTGAATTGTTTCTGGACAAGAATAAAGACTATGTTGTTGCTGAACATCAAGCTCTGTTGAATGCTTCCAATTGCTCCTTTGTATCGCGTTTGTTCCCCCCGTTAGCTGAAGAATCCAAATCTTCAAAGTTCTCTTCAATTGGTACTCGGTTTAAGCAACAATTACAATCATTGCTTGAAACTCTTAGTTCAACAGAGCCGCATTACATTCGTTGTGTAAAACCCAATAATCTACTAAAACCTGCCATTTTTGAGAATCAAAATGTTCTTCAACAACTGCGTTGTGGGGGTGTCATGGAGGCAATTAGGATTAGCTGTGCAGGATACCCGACAAGGAAAACATTTGATGAATTTATTGACCGTTTTGGTCTTCTTGCTCCTGAAGTTTTGGATCGAAGCTCCGACGAAGTAACTGCTTGCAAGAGGCTGCTTGAGAAGGTTGAACTTCAAGGATTCCAGGTTGGCAAGACAAAGGTGTTTTTAAGGGCTGGCCAGATGGCCGATCTTGATGGCAGAAGGACTGAGATCTTAGGCAGATCTGCCAGCATTATTCAGCGGAAATTTCGCTCTTATCTTTCAAGGAGAAGTTTCATCTTGCTTCGGAAATCAGCTTTACGAATTCAAGCTGCATGCAGAGGACATCTTTCTCGGCAAGTTTATGAGAGCATGCGGAGAGAAGCTTCTTCATTGATGATCCAAAAGAATTTGCGCATGTATCTTCATAGGAAAGCTTATAAAGATTTGTATTCCTCTGCCGTATCTATCCAAACTGGTATGCGTGGAATGACAGCTCGAAATGAGCTACGCTTCAGGAGACAGACTAAAGCATCAATCATTATTCAGAGCCATTGCAGAAAATACTTAGCACAGCTGCATTACAGAAAAGAAAAGAAAGCAGCAATTACCACACAATGTGCTTGGCGAGGAAGATGTGCTCGGAAAGAGTTAAAGAAGCTTAAAATGGCTGCAAGAGAAACGGGAGCACTCCAAGCAGCAAAAAACAAATTGGAAAAGCAGGTTGAAGAGCTGACATGGAGATTGCAACTGGAGAAGCGTATGAGGGCGGACTTGGAAGAAGCTAAAACACAAGAAAATGGAAAACTACAATCTGCTTTGCAAGACATGCAATTGCAATTTAGAGAAACTAAAGCAATTCTGGACAAAGAAAGAGAATCTGCTAAAAAAGCAGCTGAATCGCCTGCCATAAAGGAGGTTCCAGTCGTAGACAATGCGATGCTGGAGAAGCTTACGAGTGAAAATGAGAAGCTAAAGGATTTAGTGAGCTCTTTGGAGAAGAAAATTGATGTTGCAGAGAGAAAATTTGAAGAGGCAAGCAAAATTAGTGAAGAGAGATTGAAACAAGCTGTAGATGCAGAAACAAAGATGATTCAGTTAAAGACAGCAATGCAAAGGCTTGAAGAAAAATTCTCTGATATCGAAACTGAAAATCAGATTCTTCGGCAGCAAGCGTTAATGAATTCACCTGTCAAAAAGCTGTCAGATCATAGACCATTACCTGCAAATGAGAGATTGGAAAATGGTCACCATTTGGCCGACAATAATACGATCAAGGAAGTAGAGAGTGTAACACCTGTAAAAATGATCAGCTCTGTGAGCAAACCTCCTATAGAACATCAACAAGAGAATGTCGATGCTCTTATTAGTTGTGTTATGGAAAACATTGGCTTTAGCAATGGCAAGCCTGTTGCAGCATTTAGTATTTATAAATGCCTTCTCCACTGGAAATCCTTCGAGGCTGAAAGAACTAGCGTGTTTGACCGCCTCATTCAGATGATTGGTTCTGCCATAGAGAATCAAGATAACAATGATCATATGGCCTATTGGCTATCAAACACATCTGCATTATTGTTCTTACTTCAAAGAACCCTGAAGGCAGCTGGTACAACTCCGTACAAAAAGCCGCCCCCTCCAACTTCCTTGTTTGGAAGGATGACAATGGGTTTTCGATCGTCTCCTTCGTCCAACAATCTCCCTTTCGGTGGAGTCAAGGTTGTTCGCCAAGTAGAGGCGAAGTACCCGGCTTTGCTTTTTAAGCAGCAGCTCACTGCTTATGTTGAGAAAATATTCGGGATCATTCGAGATAACTTGAAGAAAGAGTTGACTTCTTTGCTTTCCATGTGTATCCAGGCCCCAAGAACGTCGAAGGGAGTGCTGAGATCTGGAAGATCCTTCGGAAAGGATTCTCCAACAAGTTACTGGCTAAGCATCATAGAAAGCCTCAACACTCTACTCTGCGCCTTAAAAGAAAATTTCGTACCTTCGATTCTCACCCAAAAGATCTATACTCAGACTTTCTCATGCATCAACGTCCAGCTCTTTAATAGTCTTCTTCTCCGACGCGAATGTTGTACGTTCAGCAATGGTGAGTATGTAAAAGCCGGATTAGCAGAGTTGGAGCTTTGGTGCTGCCAAGCAAAAGAAGAATATGCAGGATCGTCGTGGGATGAGCTCAAACACATTAGACAGGCCGTGGGGTTTTTGGTTATACATCAAAAATACAGAATATCATACGACGAAATCACCAATGATCTTTGCCCGATCCTGAGTGTCCAGCAGCTCTACAGAATATGCACATTGTATTGGGACGACAACTATAACACTCGAAGCGTGTCTCCTGGTGTGATTTCTAGCATGAGAATTCTTATGACAGAGGACTCCAACGATGCAGAAAGCAGCTCCTTCCTTCTAGACGACAATTCCAGCATCCCATTCTCTGTTGATGACCTCTCAAATTCGCTTCAAGAAAAAGATTTTTCGGACGTAAAACCCGCTGATGTACTCTTGGAGAATCCGTCCTTCCAGTTTCTGCATGAATGA | 4509 | 41.34 | MATTGSPGVGSLVWLEDPEVAWIDGEVLEVNREDIKVLCTSGKTVVVKASSVYPKDAEVPPCGVDDMTRLAYLHEPGVLQNLRLRYDINEIYTYTGNILIAVNPFRRLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMRNDGVSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQNGRISGAAVRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIERYKLGNPRTFHYLNQSNCYDLDGVDDRKEYFETRRAMDIVGISSEEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSRFHLKTAAELFMCDEKALEDSLCKRVIVTRDETITKCLDPTSAVLSRDALAKVVYSRLFDWLVDKINNSIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHNRFTKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLNASNCSFVSRLFPPLAEESKSSKFSSIGTRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENQNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIDRFGLLAPEVLDRSSDEVTACKRLLEKVELQGFQVGKTKVFLRAGQMADLDGRRTEILGRSASIIQRKFRSYLSRRSFILLRKSALRIQAACRGHLSRQVYESMRREASSLMIQKNLRMYLHRKAYKDLYSSAVSIQTGMRGMTARNELRFRRQTKASIIIQSHCRKYLAQLHYRKEKKAAITTQCAWRGRCARKELKKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENGKLQSALQDMQLQFRETKAILDKERESAKKAAESPAIKEVPVVDNAMLEKLTSENEKLKDLVSSLEKKIDVAERKFEEASKISEERLKQAVDAETKMIQLKTAMQRLEEKFSDIETENQILRQQALMNSPVKKLSDHRPLPANERLENGHHLADNNTIKEVESVTPVKMISSVSKPPIEHQQENVDALISCVMENIGFSNGKPVAAFSIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDNNDHMAYWLSNTSALLFLLQRTLKAAGTTPYKKPPPPTSLFGRMTMGFRSSPSSNNLPFGGVKVVRQVEAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTSLLSMCIQAPRTSKGVLRSGRSFGKDSPTSYWLSIIESLNTLLCALKENFVPSILTQKIYTQTFSCINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPGVISSMRILMTEDSNDAESSSFLLDDNSSIPFSVDDLSNSLQEKDFSDVKPADVLLENPSFQFLHE | 1502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 40977153 | 40988135 | - | Bma029539.1 | Bma09g00494 | 88540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma09g00494 | 1502 | Pfam | DIL domain | 1324 | 1427 | IPR002710 | - | |
| Bma09g00494 | 1502 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 600 | - | - | |
| Bma09g00494 | 1502 | Pfam | Myosin head (motor domain) | 64 | 719 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | Gene3D | - | 666 | 728 | - | - | |
| Bma09g00494 | 1502 | Gene3D | Kinesin motor domain | 65 | 661 | IPR036961 | - | |
| Bma09g00494 | 1502 | Coils | Coil | 1012 | 1046 | - | - | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 736 | 763 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | DIL_2 | 1323 | 1430 | IPR002710 | - | |
| Bma09g00494 | 1502 | SMART | iq_5 | 829 | 851 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | iq_5 | 781 | 803 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | iq_5 | 852 | 874 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | iq_5 | 756 | 778 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | iq_5 | 733 | 755 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SMART | iq_5 | 804 | 826 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | Myosin N-terminal SH3-like domain | 10 | 52 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | ProSiteProfiles | Myosin motor domain profile. | 62 | 731 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | SMART | MYSc_2a | 57 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | CDD | MYSc_Myo11 | 76 | 719 | IPR036018 | - | |
| Bma09g00494 | 1502 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 787 | 882 | IPR027417 | - | |
| Bma09g00494 | 1502 | Gene3D | - | 734 | 783 | - | - | |
| Bma09g00494 | 1502 | Gene3D | - | 832 | 881 | - | - | |
| Bma09g00494 | 1502 | Gene3D | - | 784 | 831 | - | - | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 782 | 811 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 853 | 882 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 784 | IPR027417 | - | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 830 | 859 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | IQ calmodulin-binding motif | 736 | 754 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | IQ calmodulin-binding motif | 855 | 874 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | IQ calmodulin-binding motif | 785 | 803 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | IQ calmodulin-binding motif | 831 | 851 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Pfam | IQ calmodulin-binding motif | 758 | 777 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | Gene3D | - | 439 | 622 | - | - | |
| Bma09g00494 | 1502 | PANTHER | MYOSIN-14 | 6 | 1500 | - | - | |
| Bma09g00494 | 1502 | Gene3D | - | 252 | 310 | - | - | |
| Bma09g00494 | 1502 | Coils | Coil | 876 | 931 | - | - | |
| Bma09g00494 | 1502 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | CDD | MyosinXI_CBD | 1101 | 1471 | IPR037975 | GO:0007015 | |
| Bma09g00494 | 1502 | ProSiteProfiles | Dilute domain profile. | 1150 | 1448 | IPR002710 | - | |
| Bma09g00494 | 1502 | Coils | Coil | 970 | 1004 | - | - | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 757 | 786 | IPR000048 | GO:0005515 | |
| Bma09g00494 | 1502 | PANTHER | MYOSIN | 6 | 1500 | - | - | |
| Bma09g00494 | 1502 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma09g00494 | 1502 | ProSiteProfiles | IQ motif profile. | 805 | 834 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma02g00742 | Bma-Chr2:38379705 | Bma09g00494 | Bma-Chr9:40977153 | 0 | dispersed | |
| Bma07g00554 | Bma-Chr7:7539438 | Bma09g00494 | Bma-Chr9:40977153 | 0 | dispersed | |
| Bma09g00494 | Bma-Chr9:40977153 | Bma15g00717 | Bma-Chr15:13235584 | 0 | dispersed | |
| Bma14g00299 | Bma-Chr14:3715361 | Bma09g00494 | Bma-Chr9:40977153 | 6.23E-145 | dispersed | |
| Bma14g00302 | Bma-Chr14:3790985 | Bma09g00494 | Bma-Chr9:40977153 | 9.69E-145 | dispersed | |
| Bma09g00494 | Bma-Chr9:40977153 | Bma09g00523 | Bma-Chr9:41799897 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma09g00494 | K10357 | - | mnt:21398991 | 2541.92 |