Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00495 ATGCTGACAGAAGATGAGAACAGAGTGGATGACTATATGAGTTCACAGAAATACATAATTGTTAAAATGAGATCAATTCTAATAGACTGGTTGATCGAAGTTCATCGTAAATTTGAACTCTCCCCAGAAACTCTTTACTTGATTGCACATATTGTTGATAGATTTCTCTCCATCACAAAAGTTCAAAGAACAGAACTTCAATTAGTTGGCATAAGCTCCATGCTCTTAGCTTGCAAGTACGAAGAAATCTGGGCTCCAGCGCAGGTTAATGATTTTGTAAGCATATCTGCTAATGCTTACGTGAGAGAACAAATTCTTGTAATGGAGAAAACGATTCTTGAAAAGCTTCAATGGAGTTTAACAGTTCCAACTCCTTACGTTTTCCTCGTTCGGTACATTAAAGCTTCAGAATCATCTAATAAGGAGATGGAAAATATAGTGTATTTTCTTACTGAACTCGGCTTGATGCATTATCCCACAATGGTTTCTCATCGCCCTTCCATGGTTGCCGCTTCTGCTGTTTATGCCGCAAGATGTACACTTGATAAACGTCCTTCTTGGACTGCAACTCTAGAACACCACACAGGCTATTGCGAAAACCAACTAATCGACTGCGCCAAAATCTTGGTTGGCTTGCACGTGGGAGCGGCGGAGAACAAGCTCGGAGCAGTATATCGTAAATTCAAGAACCACGATCGTTGTGCAGTTGCTCTTCTCGATCCAGCAACCAAGTTAAGTGGACATTCTTTGGATTTCCACTAA 762 40.55 MLTEDENRVDDYMSSQKYIIVKMRSILIDWLIEVHRKFELSPETLYLIAHIVDRFLSITKVQRTELQLVGISSMLLACKYEEIWAPAQVNDFVSISANAYVREQILVMEKTILEKLQWSLTVPTPYVFLVRYIKASESSNKEMENIVYFLTELGLMHYPTMVSHRPSMVAASAVYAARCTLDKRPSWTATLEHHTGYCENQLIDCAKILVGLHVGAAENKLGAVYRKFKNHDRCAVALLDPATKLSGHSLDFH 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41061080 41062164 - Bma029541.1 Bma09g00495 88541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00495 253 Pfam Cyclin, N-terminal domain 9 120 IPR006671 -
Bma09g00495 253 SUPERFAMILY Cyclin-like 122 242 IPR036915 -
Bma09g00495 253 Pfam Cyclin, C-terminal domain 123 240 IPR004367 -
Bma09g00495 253 CDD CYCLIN 23 113 IPR013763 -
Bma09g00495 253 PANTHER CYCLINS 2 243 IPR039361 -
Bma09g00495 253 Gene3D - 9 114 - -
Bma09g00495 253 Gene3D - 115 250 - -
Bma09g00495 253 SMART cyclin_7 29 114 IPR013763 -
Bma09g00495 253 SMART cyclin_7 127 211 IPR013763 -
Bma09g00495 253 CDD CYCLIN 121 210 IPR013763 -
Bma09g00495 253 PANTHER CYCLIN-B1-4 2 243 - -
Bma09g00495 253 PIRSF Cyclin_A_B_D_E 2 252 IPR039361 -
Bma09g00495 253 SUPERFAMILY Cyclin-like 10 120 IPR036915 -
Bma09g00495 253 SMART Cyclin_C_2 123 242 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00495 Bma-Chr9:41061080 Bma11g00315 Bma-Chr11:2966020 1.54E-140 dispersed
Bma09g00495 Bma-Chr9:41061080 Bma07g00293 Bma-Chr7:3670622 2.55E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00495 K21777 - twl:120008028 351.288