Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00495 | ATGCTGACAGAAGATGAGAACAGAGTGGATGACTATATGAGTTCACAGAAATACATAATTGTTAAAATGAGATCAATTCTAATAGACTGGTTGATCGAAGTTCATCGTAAATTTGAACTCTCCCCAGAAACTCTTTACTTGATTGCACATATTGTTGATAGATTTCTCTCCATCACAAAAGTTCAAAGAACAGAACTTCAATTAGTTGGCATAAGCTCCATGCTCTTAGCTTGCAAGTACGAAGAAATCTGGGCTCCAGCGCAGGTTAATGATTTTGTAAGCATATCTGCTAATGCTTACGTGAGAGAACAAATTCTTGTAATGGAGAAAACGATTCTTGAAAAGCTTCAATGGAGTTTAACAGTTCCAACTCCTTACGTTTTCCTCGTTCGGTACATTAAAGCTTCAGAATCATCTAATAAGGAGATGGAAAATATAGTGTATTTTCTTACTGAACTCGGCTTGATGCATTATCCCACAATGGTTTCTCATCGCCCTTCCATGGTTGCCGCTTCTGCTGTTTATGCCGCAAGATGTACACTTGATAAACGTCCTTCTTGGACTGCAACTCTAGAACACCACACAGGCTATTGCGAAAACCAACTAATCGACTGCGCCAAAATCTTGGTTGGCTTGCACGTGGGAGCGGCGGAGAACAAGCTCGGAGCAGTATATCGTAAATTCAAGAACCACGATCGTTGTGCAGTTGCTCTTCTCGATCCAGCAACCAAGTTAAGTGGACATTCTTTGGATTTCCACTAA | 762 | 40.55 | MLTEDENRVDDYMSSQKYIIVKMRSILIDWLIEVHRKFELSPETLYLIAHIVDRFLSITKVQRTELQLVGISSMLLACKYEEIWAPAQVNDFVSISANAYVREQILVMEKTILEKLQWSLTVPTPYVFLVRYIKASESSNKEMENIVYFLTELGLMHYPTMVSHRPSMVAASAVYAARCTLDKRPSWTATLEHHTGYCENQLIDCAKILVGLHVGAAENKLGAVYRKFKNHDRCAVALLDPATKLSGHSLDFH | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 41061080 | 41062164 | - | Bma029541.1 | Bma09g00495 | 88541 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00495 | 253 | Pfam | Cyclin, N-terminal domain | 9 | 120 | IPR006671 | - | |
Bma09g00495 | 253 | SUPERFAMILY | Cyclin-like | 122 | 242 | IPR036915 | - | |
Bma09g00495 | 253 | Pfam | Cyclin, C-terminal domain | 123 | 240 | IPR004367 | - | |
Bma09g00495 | 253 | CDD | CYCLIN | 23 | 113 | IPR013763 | - | |
Bma09g00495 | 253 | PANTHER | CYCLINS | 2 | 243 | IPR039361 | - | |
Bma09g00495 | 253 | Gene3D | - | 9 | 114 | - | - | |
Bma09g00495 | 253 | Gene3D | - | 115 | 250 | - | - | |
Bma09g00495 | 253 | SMART | cyclin_7 | 29 | 114 | IPR013763 | - | |
Bma09g00495 | 253 | SMART | cyclin_7 | 127 | 211 | IPR013763 | - | |
Bma09g00495 | 253 | CDD | CYCLIN | 121 | 210 | IPR013763 | - | |
Bma09g00495 | 253 | PANTHER | CYCLIN-B1-4 | 2 | 243 | - | - | |
Bma09g00495 | 253 | PIRSF | Cyclin_A_B_D_E | 2 | 252 | IPR039361 | - | |
Bma09g00495 | 253 | SUPERFAMILY | Cyclin-like | 10 | 120 | IPR036915 | - | |
Bma09g00495 | 253 | SMART | Cyclin_C_2 | 123 | 242 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma09g00495 | Bma-Chr9:41061080 | Bma11g00315 | Bma-Chr11:2966020 | 1.54E-140 | dispersed | |
Bma09g00495 | Bma-Chr9:41061080 | Bma07g00293 | Bma-Chr7:3670622 | 2.55E-179 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00495 | K21777 | - | twl:120008028 | 351.288 |