Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00585 ATGTCTCGGACGCCCAATTATGAGTTCCAGGAATGGTGGAACAAACAGCGAGAAAAAAATCATCAGGAGCTTTTCTTGGACAAGTCGGACGCCTCCACCACCAGTTCCTTTATCGCCTTCGACGTTCCAGACGACGAATTGCCTCCTGATCTTACCGTTGAGAAGGACCGGGGAAGGACGCGTAGTGCGCGCCAGCTCTCGTTTGTTTGCCTCTTGAAATTCCAGCAAATCGCGGCGTTTTTTACTTCCGTCACCGCCGGCTTTGTTTTCCTCATTCGCACTGCGAATCGTCGGATCGCGTCGCCTGATTCTCCCGCTGATTCCGCTTCGTCTCGGCTTTACCGGATTATCAAAGTGTTTTTGATTGTTGTGCTGTTTTTGCTGGTCTTTGAGCTTGTGGCTTACTTCAATGGCTGGCATTTCAGTCCGCCTTCAGTTGGTTCAGCCGAAGTACTTGGAATGCTGGAATTCTTGTATGCCAATTGGCTCCATATTCGCGCCAACTACTTGGCCCCGCCGCTCCAGAGCTTGACTAATGTGTGCATTGTATTGTTCTTGATACAATCGGTGGATCGCATAGTATTGATGATGGGATGCTTTTGGATCAAGCTCCGGAGGTTGAAGCCTAAGTCGGAGATCGAGTACCCAGCCAGTGACGGGAATGTGAACGTGGAGGATTATCCTTCGGTTCTGGTACAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAACAATCTATTGCAGCCGTTTGTATTCAGGATTGGCCCAAGGAGAAAATGCTTGTACAGGTGTTAGATGATTCCGATGAACAAGATGTGCAAATGCTTATCAAGGCAGAAGTGCAAAAATGGCAACAGAGGGGCATTCGCATACTGTATAGACACCGTCTTATACGTACTGGCTATAAGGCAGGGAATCTCAAATCAGCTATGGGCTGTGATTATATAAAAGATTACGAGTTTGTGGCCATCTTTGATGCAGATTTTCAACCAGGCCCAGATTTTTTGAAGAAAACCATTCCACACTTCAAGGGAAATCATGATCTAGCATTGGTCCAGACAAGGTGGGCATTCGTAAACAAGGACGAGAACCTACTCACTAGACTGCAGAACATTAATTTATCATTCCATTTCGAGGTTGAACAGCAAGTCAATGGTGTGTTTCTCAACTTTTTTGGTTTTAATGGAACTGCTGGTGTATGGAGAATCAAAGCTCTTGAAGAATGTGGTGGCTGGTTAGAAAGAACAACGGTAGAGGACATGGATATTGCTGTCCGTGCACATCTTCATGGGTGGAAGTTCGTATATTTGAACGATGTTAAGTGCCTTTGTGAACTACCAGAGTCGTATGAGGCATACAAGAAACAGCAACATCGCTGGCATTCTGGTCCAATGCAGTTGTTTCGCTTGTGTTTCCTTGATGTACTGCGATCAAAGGTAAGTTGGGCGAAAAAGGCCAACCTGATATTTCTCTTTTTCCTCCTCCGAAAGCTTATCCTACCCTTTTATTCTTTCACACTGTTTTGCATCATTCTCCCATTGACCATGTTCCTTCCGGAAGCTCAGCTCCCTGCATGGGTTGTTTGCTATGTCCCTGGAATCATGTCTGTGGTAAACATACTTCCAGCACCAAGATCATTTCCGTTTATAGTACCTTACCTTCTGTTTGAGAATACCATGTCAGTAACCAAGTTCAATGCAATGATATCCGGATTGTTCCGCTTTGGGAGTTCTTATGAATGGATTGTTACAAAGAAGTTGGGTAGATCATCAGAGACTGATTTAGTTGCCTTTGAAAGGGAGTCTGATCCTCTGATGGAAACTACTGGTTTTCTTCGATCATCCTCTGAATCGGGCCTTCAAGAACTCACCAAGCTAGAAATATCTAAAAAAACTGGGAAGTCGAGAAAAAATCGTCTGTACAGGAAGGAACTTGCTCTTGCATTTATTTTGTTAACTGCTTCTGTCAGAAGCTTGTTGTCTGCTCAAGGAATTCACTTCTACTTTCTCCTATTTCAAGGGATCACATTTCTAGTTGTTGGCCTTGATTTGATAGGAGAGCAGGTTAGTTGA 2073 44.67 MSRTPNYEFQEWWNKQREKNHQELFLDKSDASTTSSFIAFDVPDDELPPDLTVEKDRGRTRSARQLSFVCLLKFQQIAAFFTSVTAGFVFLIRTANRRIASPDSPADSASSRLYRIIKVFLIVVLFLLVFELVAYFNGWHFSPPSVGSAEVLGMLEFLYANWLHIRANYLAPPLQSLTNVCIVLFLIQSVDRIVLMMGCFWIKLRRLKPKSEIEYPASDGNVNVEDYPSVLVQIPMCNEREVYQQSIAAVCIQDWPKEKMLVQVLDDSDEQDVQMLIKAEVQKWQQRGIRILYRHRLIRTGYKAGNLKSAMGCDYIKDYEFVAIFDADFQPGPDFLKKTIPHFKGNHDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEECGGWLERTTVEDMDIAVRAHLHGWKFVYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFLDVLRSKVSWAKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAQLPAWVVCYVPGIMSVVNILPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSETDLVAFERESDPLMETTGFLRSSSESGLQELTKLEISKKTGKSRKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42932507 42938884 - Bma029648.1 Bma09g00585 88631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00585 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 446 IPR029044 -
Bma09g00585 690 PANTHER - 30 689 - -
Bma09g00585 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 506 IPR029044 -
Bma09g00585 690 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 30 689 - -
Bma09g00585 690 Pfam Glycosyl transferase family group 2 322 518 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01461 Bma-Chr7:50288591 Bma09g00585 Bma-Chr9:42932507 1.44E-138 dispersed
Bma09g00585 Bma-Chr9:42932507 Bma14g00424 Bma-Chr14:4982646 1.30E-123 dispersed
Bma01g02228 Bma-Chr1:79288701 Bma09g00585 Bma-Chr9:42932507 0 transposed
Bma01g02238 Bma-Chr1:79515244 Bma09g00585 Bma-Chr9:42932507 0 transposed
Bma04g00358 Bma-Chr4:2891941 Bma09g00585 Bma-Chr9:42932507 0 transposed
Bma15g00649 Bma-Chr15:9401515 Bma09g00585 Bma-Chr9:42932507 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00585 - - csv:101216681 1155.2