Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00601 ATGCACAGTAATACAAGTGTTGTGGAAATATGTCACATTTTCTTTTCTTTTTTTTTTCAGGTAAATACAAGTCTCCCCAAACCGACAAATTTTTCGGGAAATAGTTTTGATGTGCTATCACATGATTCTTCCACAGATATTACCAATATATATAGCAGTTTACTTCCGATCGAGAGAATCGGAGTTGATGTCACATACTTCCCCAAGAAACCACCCGACTCTGCCGTTTGTGATGGAGTCAAATTGAGTGATTATGAAGTTCATCAAAATGCAATATTTCAAAATGTTAAAGAAATGGAAGAGTTTCAAAACAAGTCATGCGGGATGGGCCAATACGACTCGTCTTTAAAGTTTCCTGCTGGGTTTGAGCTACATGAAGCACTAGGACCGGCTTTTCTGAAAGAATTAAACTGTTTTGATTCAGCAAATGTAGTCAGCAATCCTGATCCAGCCAAGAAAAAGAGAGCCAAGCCCGGTGAAAATTGCAGACCAAGACCAAGGGACAGGCAATTAATACAAGATCGAATCAAGGAGCTTCGAGAACTAGTGCCAAATGGAGCAAAGTGCAGTATCGATTCGCTGCTGGAGCGCACTATCCAGCACATGCTATTTTTGCAAGGCATAGCCAAACATGCCGAGAAGTTGAATAAATGTGCCAATACGAAGCTGCATCAAATGGGGAACGGTATGATAGGACCGTCAAGTAACGAAGAGGGCTCGAGCTGGGCAGTTGAAGTAGGTGGCCATCTTAAAGTTTGTTCAATAATTGTGGAGAATGTCAATAAGAATGGGCAAATTCTTGTAGAGGTGAGTAAATCCGAGGTTTCAAGTCTATTTGACCGAACGGGAAAGTCCTTTTCTAACAGCCAGACCAAACTCGCGCAGATGTTGTGCGAAGAATGCAGCCATTTTCTAGAGATAGCAGGAGCCATCAAGAGCTTGGGTCTGTCAATTCTGAAAGGCACTACAGAAGCCTATGGGGAGAAGATATGGATATGTTTCATAGTTGAGGGGGAGAACAACAGAAGCATACACAGAATGGACATATTATGGTCCCTTGTTCAAATTCTACAGCCTAAGAATGTGATGTAA 1092 41.67 MHSNTSVVEICHIFFSFFFQVNTSLPKPTNFSGNSFDVLSHDSSTDITNIYSSLLPIERIGVDVTYFPKKPPDSAVCDGVKLSDYEVHQNAIFQNVKEMEEFQNKSCGMGQYDSSLKFPAGFELHEALGPAFLKELNCFDSANVVSNPDPAKKKRAKPGENCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIQHMLFLQGIAKHAEKLNKCANTKLHQMGNGMIGPSSNEEGSSWAVEVGGHLKVCSIIVENVNKNGQILVEVSKSEVSSLFDRTGKSFSNSQTKLAQMLCEECSHFLEIAGAIKSLGLSILKGTTEAYGEKIWICFIVEGENNRSIHRMDILWSLVQILQPKNVM 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43192545 43194590 + Bma029665.1 Bma09g00601 88647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00601 363 MobiDBLite consensus disorder prediction 150 167 - -
Bma09g00601 363 MobiDBLite consensus disorder prediction 147 167 - -
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 30 139 IPR043561 GO:0003700|GO:0006355
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR EMB1444-RELATED 293 362 - -
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR EMB1444-RELATED 30 139 - -
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR EMB1444-RELATED 146 272 - -
Bma09g00601 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 224 IPR036638 GO:0046983
Bma09g00601 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 293 362 IPR043561 GO:0003700|GO:0006355
Bma09g00601 363 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 146 272 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00206 Bma-Chr7:2509222 Bma09g00601 Bma-Chr9:43192545 8.77E-49 dispersed
Bma09g00601 Bma-Chr9:43192545 Bma10g00304 Bma-Chr10:2766695 2.04E-49 dispersed
Bma09g00601 Bma-Chr9:43192545 Bma14g00384 Bma-Chr14:4596578 1.16E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00601 - - mcha:111022869 314.309