Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00617 | ATGGAGAATAATCCGTATGAGGCCGCGACCGACGATTTCCTAGAGCAAATTCTTGGTGTTCCTGCTTTCGCGCCGAATGAATCAGGCCTGGCAGGACATGATGGTGGATTGTCAGGAGCTGTGGCTCGCGGTTCGATGATGCTGCAGCTCAGCTCCGGGGACGGTTCTTACCACTCGGCCTGCGTTGGTGGGGGAAGCGATGGGGGCGCAGGGTTTCGTGGCCCTGGTTTTCCCTTGGGGTTGAGCTTGGAGCAAGGAAAGTGTGGGTATCTGAAGCCTGAGGAGGCATCCGGTAGCGGCCCGTGGTTCCGCGGCGAGGTCGTCGATGGCAGAGCTTCATCGATAACAACTGTTTTCCAAGGCCTACAAATTACCACCAATGTTAAAGGAGCGCCACATCCTCCAGCAATGCGGCCAAGAGTTCGAGCTAGACGAGGACAAGCTACAGATCCCCATAGTATTGCTGAGAGGTTACGCAGGGAAAGAATTGCAGAGAGAGTCAGGGCATTGCAGGAACTGGTTCCTAGTTTAAACAAGACAGATAAAGCTGCTATGCTTGATGAAATAGTAGATTATGTGAAGTTCCTGCGACTCCAAGTGAAGGTTTTAAGCATAAGTAGACTGGGAGGTGCTGGGGCCGTAGAACCTCTTATAACAGACATTTCATTATTATCACTTAAGGAAAATGGAAGTGGAGATGGAAGAAACCGACCCGCCTGGGAGAAGTGGTCAGATGATTGCACAGAAAGACAAGTTGCTAAGTTAATGGAAGAAAATGTTGGTGCTGCTATGCAATTTCTTCAATCCAAGGCCATTTGTCTCATGCCTATCTCTTTAGCCTGCGCAATCGACCACACCAAGCCAGCTGACTCCGGCAGTGTGGTCGAGCCGGAGTCAAACCCACCATACTCGGCCTTATAG | 921 | 51.03 | MENNPYEAATDDFLEQILGVPAFAPNESGLAGHDGGLSGAVARGSMMLQLSSGDGSYHSACVGGGSDGGAGFRGPGFPLGLSLEQGKCGYLKPEEASGSGPWFRGEVVDGRASSITTVFQGLQITTNVKGAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERVRALQELVPSLNKTDKAAMLDEIVDYVKFLRLQVKVLSISRLGGAGAVEPLITDISLLSLKENGSGDGRNRPAWEKWSDDCTERQVAKLMEENVGAAMQFLQSKAICLMPISLACAIDHTKPADSGSVVEPESNPPYSAL | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 43393282 | 43396745 | - | Bma029683.1 | Bma09g00617 | 88663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00617 | 306 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 7 | 292 | - | - | |
Bma09g00617 | 306 | MobiDBLite | consensus disorder prediction | 129 | 151 | - | - | |
Bma09g00617 | 306 | MobiDBLite | consensus disorder prediction | 287 | 306 | - | - | |
Bma09g00617 | 306 | Gene3D | - | 142 | 203 | IPR036638 | GO:0046983 | |
Bma09g00617 | 306 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 147 | 196 | IPR011598 | GO:0046983 | |
Bma09g00617 | 306 | Pfam | Helix-loop-helix DNA-binding domain | 152 | 196 | IPR011598 | GO:0046983 | |
Bma09g00617 | 306 | PANTHER | TRANSCRIPTION FACTOR UNE12 ISOFORM X1 | 7 | 292 | - | - | |
Bma09g00617 | 306 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 145 | 205 | IPR036638 | GO:0046983 | |
Bma09g00617 | 306 | SMART | finulus | 153 | 202 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00324 | Bma-Chr1:2675360 | Bma09g00617 | Bma-Chr9:43393282 | 4.37E-57 | dispersed | |
Bma09g00346 | Bma-Chr9:30183026 | Bma09g00617 | Bma-Chr9:43393282 | 0 | dispersed | |
Bma09g00617 | Bma-Chr9:43393282 | Bma15g00611 | Bma-Chr15:7800367 | 1.66E-163 | dispersed | |
Bma13g00994 | Bma-Chr13:42094371 | Bma09g00617 | Bma-Chr9:43393282 | 6.09E-12 | dispersed | |
Bma13g01005 | Bma-Chr13:42313730 | Bma09g00617 | Bma-Chr9:43393282 | 6.94E-12 | dispersed | |
Bma09g00617 | Bma-Chr9:43393282 | Bma14g01254 | Bma-Chr14:20440056 | 6.91E-88 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57861 | PF00010 | HLH | 1.90E-07 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00617 | - | - | tcc:18613240 | 399.438 |