Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00623 | ATCGTGAATCGGAAAATGGCGGTGAATCGGACGTTGAAGCTAATCTTGTTAGGAATTCTACTCTCTGTCCCCATTTGTCGAGGAGAATCATCGACGTGCTTGACTATCTACAAGGAAGGTGGTGCTCCGGCCGTCTTCCAATCCCCGAAATGCCCCCGCTGGAAGCTCCCCAATTACTTCTCTCGACCTCCAACATCTGCGCGCTGCCAATCCGCCTTGCGTCTCGGTCGCAGAAAGTCTCAGGAAGATCGCACTCTCTGTGCCCTCGATATCCGAATTCCCTTTCCCGTTATGGCAGGGTTCAAGGAGGTTGTTGTTGGGATTGTGGCAGTTTTTGACGGTCATAATGGAGCAGAAGCTAGTGAAATGGCTTCAAAGCTCTTATTAGAGTATTTTTTGTTACACACTTATTTTCTTTTAGACGCCACATACTCTGCTGTGTTCAAGAAATCCACCAGAAAATTGTCATATCAGGGAGGGCATGAGTCAGTTTTTCTAATGTTTAATAGGGACAAAGAACTACATCATCAAGAATCGGATACTGGAAGGTCTAAATATTCGTTACCAGCTGTTTCTGATGATTATTTCCACCTGGAAATATTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGCCACATTTTCTAAGGCATCATCTAATTATAATCTTAATTCCGGTTCAACAGCCACAGTTATTTTAATGGCAGACGACCAAATTTTAGTTGCTAACATTGGAGATTCAAAGGGATTTTTGTGCTCAGAAACGTTTCAGTCACCTGCTGAGGCTAAAGCCACCATTTTAAGGTTATACATGCAGAAAAGACAAAGTGGTACTCTTTCACGTTTAAGAGGATATGGCAACTCCAAAACTCTGACTTCCAATGGAATGAATTTTCTTTCTGTTAAAGAGTTGACGAGGGATCATCATCCAGATAGAGACGATGAAAGGTCTAGGGTGGAAACTGCTGGTGGTCAGATTCTTGAATGGGGTGGTGTTGCTCGGATAAACGGTCAGCTGGCCATTTCTCGGGCAATTGGTGATTTATCCTTTAAAAGTTATGGAGTTATATCTGCACCAGAAATAACAGATTGGCAGCATTTAACTGCAAATGATAGCTATCTAATCGCAGCATCTGATGGCCTTTTTGAGAGGCTAAGCTTGGAAGACGTTTGTGACTTGCTCTGGGAAGTCCAGAATAAATTTCCAATACCATCGAGACTTTCTTCTTCCTGTGCATACTCTTTAGCTGATTGTATAGTAACCGCTGCATTAGAGAGGGGCAGTACAGATAATGTTGCAGCTGTCGTGGTTCCTTTGGCATCTCTTGGTTTATCTCAAGACTTGGCAAAGGATATCATTGTTGGGGATGAAGGCATCAATAATCCAATGTTGTGTTTGCAGAATTTGATTTCTGAATATTCAGGTGGATTTTCTAGGCTCTTAGAATTTTCTGTAGAAAAAAAACACAGAACACCTACATGTTTTTATCTGTACGAGAATCTTGATGAATTTGTGGATTACACTCTGCAAAATGATACATATGAGAATGCAAGTTATGTTGATGATCGGGCCCATGCTTGCCCTGAGACCCTTGGCCTTGATCGGCATCATGGTGGACTTGTAAATTTGTATAATCACCAGAATTTCTGCTTGAACCTTGCGAAGATTGGTTGGGGATCAAGGCAACAATGTTCAAATTCTGAAGTACTAATTAATTTCTTTAGTTTGATAGAGTCAATCCCTTTTCATGGTTCAGCGTATGAATATTCAGTTCCTGACTTGAGGTACATACTCAAGAAGAGGTTTGGTCATGGATCGTATGGCGAAGTATGGTTGGCTTTTCATTGGAATTGTGGTCAAGGAAGAAACTCTTTGAATTGGATTAGCAAAAATAGTGTCTTCTCTACTCATAATTGTGAAGATAGTCCTCCAGAGGATAACTTATTCATTTTGAAACGTATAATGGTTGAGAGAGGGACTGCGGTATACTTAAGTGGTCTTCGAGAGAAGTACTTTGGGGAAGTATTTTTGAATGCATCTACATGCTTAGGAGATTTTCAAGAAGCTGACATAGTGAACTCTGTTTTAGAAAAATCGTACTTGGATTTGGATGACATAATGGAGAATAACAAGTCACGGATTCATGAGACGGGAAACAGCTTTCAAAGAAGTCCTGTCTATGAAGAAGGTTTAGACCATATTGCAAGATATGTGGAATCCTTTGAATCTCAATCTAATCAAGTATGGCTTGTATTTCGCCATGAGGGTACTTCATTATCCAAGCTTATATATACTGTTGAAGAGCTTGAAGGAAATAGTGATGAAGGTAACATTGAAAAGAAAAAACACGTTCAGATTCTGCAGCCTTCTAAATGGTGGCACTGGTTAAAAACAACAGAGGCAGGAAAAGAGGAAATGCGTAATCTCATATGGCAGTTGTTGAAGGCACTCAAGGCTTGTCATGACCGCACTATCATCCACAGGGATATCAAGCCTGAGAACATGGTTATATGCTTTCAAGATCAAGACTCTGGGAAATGCATGAAAGGAAGTCCAAGTGGAGATCAGAATCTTGTAACCAAAATGCGCTTGATTGACTTTGGTAGTGCTATAGATGAGTTCACATTGAAGCATTTATATGGTTCCCATGGACCTTCAAGGGCCGAACAAACTCATGAGTATACTCCTCCTGAAGCCTTGTTAAATTCAAGTTGGTTTCTTGGACCAACAAGCACAACTCTGAAGTATATCTTTCTTGATATTGAATATGTAAATTTGGTTTTTGAAGTCTCCACTCAGGAATCTATGCCTTTTTCTTTTTTTAAAAAAAGAAACCAGATGTGTATTGGTATTTTGTTTGACAGGTATGATATGTGGAGTGTTGGTGTTGTGATTTTAGAGTTGATCTTGGGATCGCCTAATGTTTTTCAAATAAGCGCTTTGACACAAACTCTTTTGGACCAACATCTTGAGGGGTGGAATGAAGACTTAAAGGAAGCTTGCTTACAAGTGAGTTTATCATTCATGGAATTATGCATCTTAATTCCAACGAGTTCAAGAAAAAGTTATCAACCCATGTACAATCTGGGAGGATCGCCAGCTTCCTGGAAGTGCTCGGAAGAAGTCTTTTCCCATCATATTAGAAGTAGAGATCCTCTTAAACTAGGGTTAGTTTTCAAGTTTTTTTTTTTCAGTTTCTTTTGTAGAGTGTCTTGTAACTGCATCATAATTTCATTTTCTTTATTTTCCAGGTTTCCAAATGTTTCCGCTTTACGATTAGTTCGCCAGCTTTTACTCTGGAATCCGGAAGATCGACTTAGTGTGGACGAAGCTTTACAGCATCCATATTTCCAACCACCTCCTAATGGATGA | 3378 | 40.02 | IVNRKMAVNRTLKLILLGILLSVPICRGESSTCLTIYKEGGAPAVFQSPKCPRWKLPNYFSRPPTSARCQSALRLGRRKSQEDRTLCALDIRIPFPVMAGFKEVVVGIVAVFDGHNGAEASEMASKLLLEYFLLHTYFLLDATYSAVFKKSTRKLSYQGGHESVFLMFNRDKELHHQESDTGRSKYSLPAVSDDYFHLEILKEALLRAIHDIDATFSKASSNYNLNSGSTATVILMADDQILVANIGDSKGFLCSETFQSPAEAKATILRLYMQKRQSGTLSRLRGYGNSKTLTSNGMNFLSVKELTRDHHPDRDDERSRVETAGGQILEWGGVARINGQLAISRAIGDLSFKSYGVISAPEITDWQHLTANDSYLIAASDGLFERLSLEDVCDLLWEVQNKFPIPSRLSSSCAYSLADCIVTAALERGSTDNVAAVVVPLASLGLSQDLAKDIIVGDEGINNPMLCLQNLISEYSGGFSRLLEFSVEKKHRTPTCFYLYENLDEFVDYTLQNDTYENASYVDDRAHACPETLGLDRHHGGLVNLYNHQNFCLNLAKIGWGSRQQCSNSEVLINFFSLIESIPFHGSAYEYSVPDLRYILKKRFGHGSYGEVWLAFHWNCGQGRNSLNWISKNSVFSTHNCEDSPPEDNLFILKRIMVERGTAVYLSGLREKYFGEVFLNASTCLGDFQEADIVNSVLEKSYLDLDDIMENNKSRIHETGNSFQRSPVYEEGLDHIARYVESFESQSNQVWLVFRHEGTSLSKLIYTVEELEGNSDEGNIEKKKHVQILQPSKWWHWLKTTEAGKEEMRNLIWQLLKALKACHDRTIIHRDIKPENMVICFQDQDSGKCMKGSPSGDQNLVTKMRLIDFGSAIDEFTLKHLYGSHGPSRAEQTHEYTPPEALLNSSWFLGPTSTTLKYIFLDIEYVNLVFEVSTQESMPFSFFKKRNQMCIGILFDRYDMWSVGVVILELILGSPNVFQISALTQTLLDQHLEGWNEDLKEACLQVSLSFMELCILIPTSSRKSYQPMYNLGGSPASWKCSEEVFSHHIRSRDPLKLGLVFKFFFFSFFCRVSCNCIIISFSLFSRFPNVSALRLVRQLLLWNPEDRLSVDEALQHPYFQPPPNG | 1125 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 43564674 | 43582464 | + | Bma029692.1 | Bma09g00623 | 88669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00623 | 1125 | Pfam | Protein kinase domain | 797 | 903 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00623 | 1125 | ProSiteProfiles | Protein kinase domain profile. | 598 | 1119 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00623 | 1125 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 441 | IPR001932 | - | |
Bma09g00623 | 1125 | SMART | PP2C_4 | 60 | 439 | IPR001932 | - | |
Bma09g00623 | 1125 | Gene3D | - | 66 | 444 | IPR036457 | - | |
Bma09g00623 | 1125 | PANTHER | PROTEIN PHOSPHATASE 2C 50-RELATED | 20 | 588 | - | - | |
Bma09g00623 | 1125 | CDD | PP2Cc | 68 | 441 | IPR001932 | - | |
Bma09g00623 | 1125 | SUPERFAMILY | Protein kinase-like (PK-like) | 597 | 1121 | IPR011009 | - | |
Bma09g00623 | 1125 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 827 | 839 | IPR008271 | GO:0004672|GO:0006468 | |
Bma09g00623 | 1125 | SUPERFAMILY | PP2C-like | 62 | 442 | IPR036457 | - | |
Bma09g00623 | 1125 | Pfam | Protein phosphatase 2C | 298 | 434 | IPR001932 | - | |
Bma09g00623 | 1125 | Pfam | Protein phosphatase 2C | 204 | 256 | IPR001932 | - | |
Bma09g00623 | 1125 | SMART | serkin_6 | 598 | 1119 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00623 | 1125 | Gene3D | Transferase(Phosphotransferase) domain 1 | 790 | 1120 | - | - | |
Bma09g00623 | 1125 | PANTHER | ALPHABET, ISOFORM E-RELATED | 20 | 588 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma09g00623 | Bma-Chr9:43564674 | Bma04g00107 | Bma-Chr4:839888 | 2.22E-25 | dispersed | |
Bma09g00623 | Bma-Chr9:43564674 | Bma01g02182 | Bma-Chr1:78713791 | 1.84E-27 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66703 | PF00069 | Pkinase | 2.30E-13 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00623 | - | - | qsu:112001119 | 1294.26 |