Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00623 ATCGTGAATCGGAAAATGGCGGTGAATCGGACGTTGAAGCTAATCTTGTTAGGAATTCTACTCTCTGTCCCCATTTGTCGAGGAGAATCATCGACGTGCTTGACTATCTACAAGGAAGGTGGTGCTCCGGCCGTCTTCCAATCCCCGAAATGCCCCCGCTGGAAGCTCCCCAATTACTTCTCTCGACCTCCAACATCTGCGCGCTGCCAATCCGCCTTGCGTCTCGGTCGCAGAAAGTCTCAGGAAGATCGCACTCTCTGTGCCCTCGATATCCGAATTCCCTTTCCCGTTATGGCAGGGTTCAAGGAGGTTGTTGTTGGGATTGTGGCAGTTTTTGACGGTCATAATGGAGCAGAAGCTAGTGAAATGGCTTCAAAGCTCTTATTAGAGTATTTTTTGTTACACACTTATTTTCTTTTAGACGCCACATACTCTGCTGTGTTCAAGAAATCCACCAGAAAATTGTCATATCAGGGAGGGCATGAGTCAGTTTTTCTAATGTTTAATAGGGACAAAGAACTACATCATCAAGAATCGGATACTGGAAGGTCTAAATATTCGTTACCAGCTGTTTCTGATGATTATTTCCACCTGGAAATATTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGCCACATTTTCTAAGGCATCATCTAATTATAATCTTAATTCCGGTTCAACAGCCACAGTTATTTTAATGGCAGACGACCAAATTTTAGTTGCTAACATTGGAGATTCAAAGGGATTTTTGTGCTCAGAAACGTTTCAGTCACCTGCTGAGGCTAAAGCCACCATTTTAAGGTTATACATGCAGAAAAGACAAAGTGGTACTCTTTCACGTTTAAGAGGATATGGCAACTCCAAAACTCTGACTTCCAATGGAATGAATTTTCTTTCTGTTAAAGAGTTGACGAGGGATCATCATCCAGATAGAGACGATGAAAGGTCTAGGGTGGAAACTGCTGGTGGTCAGATTCTTGAATGGGGTGGTGTTGCTCGGATAAACGGTCAGCTGGCCATTTCTCGGGCAATTGGTGATTTATCCTTTAAAAGTTATGGAGTTATATCTGCACCAGAAATAACAGATTGGCAGCATTTAACTGCAAATGATAGCTATCTAATCGCAGCATCTGATGGCCTTTTTGAGAGGCTAAGCTTGGAAGACGTTTGTGACTTGCTCTGGGAAGTCCAGAATAAATTTCCAATACCATCGAGACTTTCTTCTTCCTGTGCATACTCTTTAGCTGATTGTATAGTAACCGCTGCATTAGAGAGGGGCAGTACAGATAATGTTGCAGCTGTCGTGGTTCCTTTGGCATCTCTTGGTTTATCTCAAGACTTGGCAAAGGATATCATTGTTGGGGATGAAGGCATCAATAATCCAATGTTGTGTTTGCAGAATTTGATTTCTGAATATTCAGGTGGATTTTCTAGGCTCTTAGAATTTTCTGTAGAAAAAAAACACAGAACACCTACATGTTTTTATCTGTACGAGAATCTTGATGAATTTGTGGATTACACTCTGCAAAATGATACATATGAGAATGCAAGTTATGTTGATGATCGGGCCCATGCTTGCCCTGAGACCCTTGGCCTTGATCGGCATCATGGTGGACTTGTAAATTTGTATAATCACCAGAATTTCTGCTTGAACCTTGCGAAGATTGGTTGGGGATCAAGGCAACAATGTTCAAATTCTGAAGTACTAATTAATTTCTTTAGTTTGATAGAGTCAATCCCTTTTCATGGTTCAGCGTATGAATATTCAGTTCCTGACTTGAGGTACATACTCAAGAAGAGGTTTGGTCATGGATCGTATGGCGAAGTATGGTTGGCTTTTCATTGGAATTGTGGTCAAGGAAGAAACTCTTTGAATTGGATTAGCAAAAATAGTGTCTTCTCTACTCATAATTGTGAAGATAGTCCTCCAGAGGATAACTTATTCATTTTGAAACGTATAATGGTTGAGAGAGGGACTGCGGTATACTTAAGTGGTCTTCGAGAGAAGTACTTTGGGGAAGTATTTTTGAATGCATCTACATGCTTAGGAGATTTTCAAGAAGCTGACATAGTGAACTCTGTTTTAGAAAAATCGTACTTGGATTTGGATGACATAATGGAGAATAACAAGTCACGGATTCATGAGACGGGAAACAGCTTTCAAAGAAGTCCTGTCTATGAAGAAGGTTTAGACCATATTGCAAGATATGTGGAATCCTTTGAATCTCAATCTAATCAAGTATGGCTTGTATTTCGCCATGAGGGTACTTCATTATCCAAGCTTATATATACTGTTGAAGAGCTTGAAGGAAATAGTGATGAAGGTAACATTGAAAAGAAAAAACACGTTCAGATTCTGCAGCCTTCTAAATGGTGGCACTGGTTAAAAACAACAGAGGCAGGAAAAGAGGAAATGCGTAATCTCATATGGCAGTTGTTGAAGGCACTCAAGGCTTGTCATGACCGCACTATCATCCACAGGGATATCAAGCCTGAGAACATGGTTATATGCTTTCAAGATCAAGACTCTGGGAAATGCATGAAAGGAAGTCCAAGTGGAGATCAGAATCTTGTAACCAAAATGCGCTTGATTGACTTTGGTAGTGCTATAGATGAGTTCACATTGAAGCATTTATATGGTTCCCATGGACCTTCAAGGGCCGAACAAACTCATGAGTATACTCCTCCTGAAGCCTTGTTAAATTCAAGTTGGTTTCTTGGACCAACAAGCACAACTCTGAAGTATATCTTTCTTGATATTGAATATGTAAATTTGGTTTTTGAAGTCTCCACTCAGGAATCTATGCCTTTTTCTTTTTTTAAAAAAAGAAACCAGATGTGTATTGGTATTTTGTTTGACAGGTATGATATGTGGAGTGTTGGTGTTGTGATTTTAGAGTTGATCTTGGGATCGCCTAATGTTTTTCAAATAAGCGCTTTGACACAAACTCTTTTGGACCAACATCTTGAGGGGTGGAATGAAGACTTAAAGGAAGCTTGCTTACAAGTGAGTTTATCATTCATGGAATTATGCATCTTAATTCCAACGAGTTCAAGAAAAAGTTATCAACCCATGTACAATCTGGGAGGATCGCCAGCTTCCTGGAAGTGCTCGGAAGAAGTCTTTTCCCATCATATTAGAAGTAGAGATCCTCTTAAACTAGGGTTAGTTTTCAAGTTTTTTTTTTTCAGTTTCTTTTGTAGAGTGTCTTGTAACTGCATCATAATTTCATTTTCTTTATTTTCCAGGTTTCCAAATGTTTCCGCTTTACGATTAGTTCGCCAGCTTTTACTCTGGAATCCGGAAGATCGACTTAGTGTGGACGAAGCTTTACAGCATCCATATTTCCAACCACCTCCTAATGGATGA 3378 40.02 IVNRKMAVNRTLKLILLGILLSVPICRGESSTCLTIYKEGGAPAVFQSPKCPRWKLPNYFSRPPTSARCQSALRLGRRKSQEDRTLCALDIRIPFPVMAGFKEVVVGIVAVFDGHNGAEASEMASKLLLEYFLLHTYFLLDATYSAVFKKSTRKLSYQGGHESVFLMFNRDKELHHQESDTGRSKYSLPAVSDDYFHLEILKEALLRAIHDIDATFSKASSNYNLNSGSTATVILMADDQILVANIGDSKGFLCSETFQSPAEAKATILRLYMQKRQSGTLSRLRGYGNSKTLTSNGMNFLSVKELTRDHHPDRDDERSRVETAGGQILEWGGVARINGQLAISRAIGDLSFKSYGVISAPEITDWQHLTANDSYLIAASDGLFERLSLEDVCDLLWEVQNKFPIPSRLSSSCAYSLADCIVTAALERGSTDNVAAVVVPLASLGLSQDLAKDIIVGDEGINNPMLCLQNLISEYSGGFSRLLEFSVEKKHRTPTCFYLYENLDEFVDYTLQNDTYENASYVDDRAHACPETLGLDRHHGGLVNLYNHQNFCLNLAKIGWGSRQQCSNSEVLINFFSLIESIPFHGSAYEYSVPDLRYILKKRFGHGSYGEVWLAFHWNCGQGRNSLNWISKNSVFSTHNCEDSPPEDNLFILKRIMVERGTAVYLSGLREKYFGEVFLNASTCLGDFQEADIVNSVLEKSYLDLDDIMENNKSRIHETGNSFQRSPVYEEGLDHIARYVESFESQSNQVWLVFRHEGTSLSKLIYTVEELEGNSDEGNIEKKKHVQILQPSKWWHWLKTTEAGKEEMRNLIWQLLKALKACHDRTIIHRDIKPENMVICFQDQDSGKCMKGSPSGDQNLVTKMRLIDFGSAIDEFTLKHLYGSHGPSRAEQTHEYTPPEALLNSSWFLGPTSTTLKYIFLDIEYVNLVFEVSTQESMPFSFFKKRNQMCIGILFDRYDMWSVGVVILELILGSPNVFQISALTQTLLDQHLEGWNEDLKEACLQVSLSFMELCILIPTSSRKSYQPMYNLGGSPASWKCSEEVFSHHIRSRDPLKLGLVFKFFFFSFFCRVSCNCIIISFSLFSRFPNVSALRLVRQLLLWNPEDRLSVDEALQHPYFQPPPNG 1125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43564674 43582464 + Bma029692.1 Bma09g00623 88669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00623 1125 Pfam Protein kinase domain 797 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00623 1125 ProSiteProfiles Protein kinase domain profile. 598 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00623 1125 ProSiteProfiles PPM-type phosphatase domain profile. 68 441 IPR001932 -
Bma09g00623 1125 SMART PP2C_4 60 439 IPR001932 -
Bma09g00623 1125 Gene3D - 66 444 IPR036457 -
Bma09g00623 1125 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 20 588 - -
Bma09g00623 1125 CDD PP2Cc 68 441 IPR001932 -
Bma09g00623 1125 SUPERFAMILY Protein kinase-like (PK-like) 597 1121 IPR011009 -
Bma09g00623 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Bma09g00623 1125 SUPERFAMILY PP2C-like 62 442 IPR036457 -
Bma09g00623 1125 Pfam Protein phosphatase 2C 298 434 IPR001932 -
Bma09g00623 1125 Pfam Protein phosphatase 2C 204 256 IPR001932 -
Bma09g00623 1125 SMART serkin_6 598 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00623 1125 Gene3D Transferase(Phosphotransferase) domain 1 790 1120 - -
Bma09g00623 1125 PANTHER ALPHABET, ISOFORM E-RELATED 20 588 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00623 Bma-Chr9:43564674 Bma04g00107 Bma-Chr4:839888 2.22E-25 dispersed
Bma09g00623 Bma-Chr9:43564674 Bma01g02182 Bma-Chr1:78713791 1.84E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66703 PF00069 Pkinase 2.30E-13 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00623 - - qsu:112001119 1294.26