Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00626 AAGGATTTTCAGAACTTAGCTGCAGGAATGGATTCTATTAACATTAGAGGGGTTGGCGATATCGCCATATCTAAGAATTCCAATTACCAGGAAGCAAAGCCATCGGATTTGAAGGGGAATGATATGGGGAGCATTAGTAATAAAGAGATGCTTTTTCGAGCTGATATGATTGATTTTAAGAACTGGGATATTCAGCTGGAAAAGCACTTGAGCCGGGTTTGGTCGAGGGACAGAGAGGCTCCGGCAAAGAAGGAAGATTGGGAGATTAATTTGTCTAAAATGGATATAAGATATGTTATAGCGCCTGGGACTTTTGGAATTGTCTACAGAGGAATTTATGATGGCCAAGATGTTGCAGTCAAAGTGTTGGATTGGGGGGAGGATGGCATTGCCACAGCTGCTGAAATTTCTGCTCTCCGGGCTTCGTTTCGGCAAGAAGTTGCTGTTTGGCATAAACTTGACCACCCTAACGTTGCAAAGTTTTATGGAGCTTCAATGGGAACTTCCAACCTGAAAATTCCTGCAAAAAGCACACCCAGCGATGGTCTTAACGCTTTTCCCTCGAGGGCTTGTTGCGTTGTAGTTGAATATCTTCCGGGAGGGACCCTAAAAAACTACTTGATAAGAAATAGGAGAAAGAAACTTGCATTTAAGGTCGTCATACTAGTTCTATTGTCTCATTTTACAACTAATGTTTATGTTTCGTTTTCTGTGCAGGTTTTAGATGGTAAGCCTTACAATCGAAAATGCGATGTTTATAGCTTGGGAATATGCTTGTGGGAAACATATTGTTGTGAGATGCCTTATCCCAATCATAGTTTCGCGGAAGTTTCGTCTGCAGTTGTCCGACAGCAGAATTTACGGCCTGACATACCGAGATGTTGTCCAAGTTCTCTGGCAAACATAATGAAAAAATGTTGGGACGCAAACCCGGAGAAACGACCCGAAATGGACGAAGTCGTGAAGTTGTTGGAAGCAGTCGATACGAGCAAGGGAGGCGGCATGATTCCCGACGATCAGGCCTCCACCTGCTTCTGCTTCGGCATCCACCGAGGCCCATAA 1062 43.97 KDFQNLAAGMDSINIRGVGDIAISKNSNYQEAKPSDLKGNDMGSISNKEMLFRADMIDFKNWDIQLEKHLSRVWSRDREAPAKKEDWEINLSKMDIRYVIAPGTFGIVYRGIYDGQDVAVKVLDWGEDGIATAAEISALRASFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPAKSTPSDGLNAFPSRACCVVVEYLPGGTLKNYLIRNRRKKLAFKVVILVLLSHFTTNVYVSFSVQVLDGKPYNRKCDVYSLGICLWETYCCEMPYPNHSFAEVSSAVVRQQNLRPDIPRCCPSSLANIMKKCWDANPEKRPEMDEVVKLLEAVDTSKGGGMIPDDQASTCFCFGIHRGP 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43610895 43613865 + Bma029695.1 Bma09g00626 88672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00626 353 Pfam Protein tyrosine and serine/threonine kinase 99 221 IPR001245 GO:0004672|GO:0006468
Bma09g00626 353 Pfam Protein tyrosine and serine/threonine kinase 240 324 IPR001245 GO:0004672|GO:0006468
Bma09g00626 353 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 14 225 - -
Bma09g00626 353 Gene3D Transferase(Phosphotransferase) domain 1 226 335 - -
Bma09g00626 353 Gene3D Phosphorylase Kinase; domain 1 82 176 - -
Bma09g00626 353 ProSiteProfiles Protein kinase domain profile. 94 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00626 353 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 237 346 - -
Bma09g00626 353 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 237 346 - -
Bma09g00626 353 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 225 - -
Bma09g00626 353 SUPERFAMILY Protein kinase-like (PK-like) 81 325 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01565 Bma-Chr6:51936843 Bma09g00626 Bma-Chr9:43610895 1.16E-163 dispersed
Bma09g00626 Bma-Chr9:43610895 Bma12g01032 Bma-Chr12:42403872 1.58E-51 dispersed
Bma02g00830 Bma-Chr2:45203595 Bma09g00626 Bma-Chr9:43610895 8.48E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66704 PF07714 PK_Tyr_Ser-Thr 4.80E-09 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00626 - - mcha:111018484 523.857