Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma09g00626 | AAGGATTTTCAGAACTTAGCTGCAGGAATGGATTCTATTAACATTAGAGGGGTTGGCGATATCGCCATATCTAAGAATTCCAATTACCAGGAAGCAAAGCCATCGGATTTGAAGGGGAATGATATGGGGAGCATTAGTAATAAAGAGATGCTTTTTCGAGCTGATATGATTGATTTTAAGAACTGGGATATTCAGCTGGAAAAGCACTTGAGCCGGGTTTGGTCGAGGGACAGAGAGGCTCCGGCAAAGAAGGAAGATTGGGAGATTAATTTGTCTAAAATGGATATAAGATATGTTATAGCGCCTGGGACTTTTGGAATTGTCTACAGAGGAATTTATGATGGCCAAGATGTTGCAGTCAAAGTGTTGGATTGGGGGGAGGATGGCATTGCCACAGCTGCTGAAATTTCTGCTCTCCGGGCTTCGTTTCGGCAAGAAGTTGCTGTTTGGCATAAACTTGACCACCCTAACGTTGCAAAGTTTTATGGAGCTTCAATGGGAACTTCCAACCTGAAAATTCCTGCAAAAAGCACACCCAGCGATGGTCTTAACGCTTTTCCCTCGAGGGCTTGTTGCGTTGTAGTTGAATATCTTCCGGGAGGGACCCTAAAAAACTACTTGATAAGAAATAGGAGAAAGAAACTTGCATTTAAGGTCGTCATACTAGTTCTATTGTCTCATTTTACAACTAATGTTTATGTTTCGTTTTCTGTGCAGGTTTTAGATGGTAAGCCTTACAATCGAAAATGCGATGTTTATAGCTTGGGAATATGCTTGTGGGAAACATATTGTTGTGAGATGCCTTATCCCAATCATAGTTTCGCGGAAGTTTCGTCTGCAGTTGTCCGACAGCAGAATTTACGGCCTGACATACCGAGATGTTGTCCAAGTTCTCTGGCAAACATAATGAAAAAATGTTGGGACGCAAACCCGGAGAAACGACCCGAAATGGACGAAGTCGTGAAGTTGTTGGAAGCAGTCGATACGAGCAAGGGAGGCGGCATGATTCCCGACGATCAGGCCTCCACCTGCTTCTGCTTCGGCATCCACCGAGGCCCATAA | 1062 | 43.97 | KDFQNLAAGMDSINIRGVGDIAISKNSNYQEAKPSDLKGNDMGSISNKEMLFRADMIDFKNWDIQLEKHLSRVWSRDREAPAKKEDWEINLSKMDIRYVIAPGTFGIVYRGIYDGQDVAVKVLDWGEDGIATAAEISALRASFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPAKSTPSDGLNAFPSRACCVVVEYLPGGTLKNYLIRNRRKKLAFKVVILVLLSHFTTNVYVSFSVQVLDGKPYNRKCDVYSLGICLWETYCCEMPYPNHSFAEVSSAVVRQQNLRPDIPRCCPSSLANIMKKCWDANPEKRPEMDEVVKLLEAVDTSKGGGMIPDDQASTCFCFGIHRGP | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 43610895 | 43613865 | + | Bma029695.1 | Bma09g00626 | 88672 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma09g00626 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 99 | 221 | IPR001245 | GO:0004672|GO:0006468 | |
Bma09g00626 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 240 | 324 | IPR001245 | GO:0004672|GO:0006468 | |
Bma09g00626 | 353 | PANTHER | KINASE ATMRK1, PUTATIVE-RELATED | 14 | 225 | - | - | |
Bma09g00626 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 226 | 335 | - | - | |
Bma09g00626 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 176 | - | - | |
Bma09g00626 | 353 | ProSiteProfiles | Protein kinase domain profile. | 94 | 353 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma09g00626 | 353 | PANTHER | KINASE ATMRK1, PUTATIVE-RELATED | 237 | 346 | - | - | |
Bma09g00626 | 353 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 237 | 346 | - | - | |
Bma09g00626 | 353 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 14 | 225 | - | - | |
Bma09g00626 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 325 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01565 | Bma-Chr6:51936843 | Bma09g00626 | Bma-Chr9:43610895 | 1.16E-163 | dispersed | |
Bma09g00626 | Bma-Chr9:43610895 | Bma12g01032 | Bma-Chr12:42403872 | 1.58E-51 | dispersed | |
Bma02g00830 | Bma-Chr2:45203595 | Bma09g00626 | Bma-Chr9:43610895 | 8.48E-156 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66704 | PF07714 | PK_Tyr_Ser-Thr | 4.80E-09 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma09g00626 | - | - | mcha:111018484 | 523.857 |