Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00653 ATGGCTTGGAGGAGAGTGTTGAAGGCTTTACAGGCACTGGTAGCCCACAGTTCTCTGTTTTGTTTCACGCTTCTGCTCGTTTTCAAGCTCGATCATGTCGTGTTCTATAGTTGGTGGATAATATTTTTGCCTCTGTGGCCATTTCACGCAGTCGTTGCTCGAGGAAGATTCTCATTACCTGCTCCATCGGTTCCACATAATCGCAATTGGGCACCTTGCCATGCGGTTGTTGCCACGACCTTGCTTATCGCATTTGAATTGCTTCTGTGTATATATCTTGAGAGCATTTATGTACATGGTTTTGCAGCAGTCAGTTTGAAGATTGTTTTTCTTCCATTATTGGCATTTGAAATGACTATTCTAATTGATAATTTCAGAATGTGTTGGGCTCTTATGCCGGGAGATAATGAAGGCTTGAGCAATGAGGCTATACGGGAAACTCTTACACACTTCTGGGTGGTGATTTCCATGATCTTCTTTGTCGCTGCTACAATCTTCACCCTCCTGAAGCTCTGTGGGGATGTTGGCGCTCTTGGTTGGTGGCACTTATTTATAAATTTTGGTATTGCTGAGTGCTTTGCCTTTCTTGTCTGTACAAAGTGGTCTAACCCTATTATTCATAGAAATTCTTCCAGTAGAGAAGCCACTTCTTCTTCTTCTTCTTCTTTGATTATTAGATATCTAGATTGGGGTAGCGGATTAATACTCTCCCCCCAGCAAGATAGAATGTGTGGCCTTCGAGACATTGGAGGCCATATAATGAAACTTCTGATTATCGGCTTTCAAATCCTTCTTTGCATGCGCCTTGAGGGAATACCCAATGCTAAATATATACCAATCCCGGCTCTTTTTTCGCCTCTTTTCCTGCTGCAAGGTGCTGGCGTATTATTTTCGGCATCTATGTTGGTGGAGAAAATTGTTCTTCTTCGACAAAGCGGATTTGGCAATGGGTTGTATTTCAGATTTTCTTCAAAAGCTAATGAATGTTTCGAGTTCTTTCACCGTGGATCAAGGCTTTTGGGTTGGTGGTCAATTGACGAAGGAAGTCGTGAGGAACTGGCCCGAATATTTCACGAGAGAGCTTCCGGGTATAATACTTTCTCTGGTTACCCTCCTGAGATTGTGAAAAAAATGCCCAAGAAAGATCTTGCTGAGGAGTGA 1161 42.81 MAWRRVLKALQALVAHSSLFCFTLLLVFKLDHVVFYSWWIIFLPLWPFHAVVARGRFSLPAPSVPHNRNWAPCHAVVATTLLIAFELLLCIYLESIYVHGFAAVSLKIVFLPLLAFEMTILIDNFRMCWALMPGDNEGLSNEAIRETLTHFWVVISMIFFVAATIFTLLKLCGDVGALGWWHLFINFGIAECFAFLVCTKWSNPIIHRNSSSREATSSSSSSLIIRYLDWGSGLILSPQQDRMCGLRDIGGHIMKLLIIGFQILLCMRLEGIPNAKYIPIPALFSPLFLLQGAGVLFSASMLVEKIVLLRQSGFGNGLYFRFSSKANECFEFFHRGSRLLGWWSIDEGSREELARIFHERASGYNTFSGYPPEIVKKMPKKDLAEE 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44070345 44079852 - Bma029723.1 Bma09g00653 88699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00653 386 Pfam Transmembrane Fragile-X-F protein 29 290 IPR019396 -
Bma09g00653 386 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 386 - -
Bma09g00653 386 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00653 Bma-Chr9:44070345 Bma12g00940 Bma-Chr12:41204920 3.21E-66 dispersed
Bma09g00653 Bma-Chr9:44070345 Bma01g00153 Bma-Chr1:1423221 1.20E-146 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00653 - - zju:107418850 622.854