Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00661 ATGGAGCCAATGGATATAGTGGGAAAGTCGAAAGAGGACGCTTCGCTTCCAAAAGCAACTATGACGAAAATCATCAAGGAGATGTTGCCGCCGGATGTACGAGTCGCAAGAGATGCTCAAGATCTTTTAATCGAGTGTTGTGTAGAGTTTATAAATCTAGTATCATCGGAGTCTAATGAAGTATGTAACAGGGAAGATAAAAGAACGATTGCGCCTGAACATGTACTCAAGGCATTAGAGATACTTGGTTTTGGCCAGTACATCGAAGAAGTCTATTCCGCATATGAACAGCACAAGCTCGAGACCATGCAAGACTCCTTGAAGGGTGGAAAGTGGAGCAATGGAGCTGAGATGACGGAGGAGGAGGCCCTGCTGGAGCAGCAGAGAATGTTTGCCGAGGCTCGAGCAAGAATGAACGGCGGGGCCACAACTCCAAAGCAAGCAGAGGGTGATCAAAGTTTAGAGAGC 468 47.01 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALEILGFGQYIEEVYSAYEQHKLETMQDSLKGGKWSNGAEMTEEEALLEQQRMFAEARARMNGGATTPKQAEGDQSLES 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44215882 44218252 - Bma031523 Bma09g00661 88707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00661 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Bma09g00661 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 - -
Bma09g00661 156 MobiDBLite consensus disorder prediction 135 156 - -
Bma09g00661 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Bma09g00661 156 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
Bma09g00661 156 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00879 Bma-Chr3:8582910 Bma09g00661 Bma-Chr9:44215882 4.41E-103 dispersed
Bma09g00661 Bma-Chr9:44215882 Bma14g00951 Bma-Chr14:10825725 1.31E-17 dispersed
Bma09g00661 Bma-Chr9:44215882 Bma08g00961 Bma-Chr8:48622251 4.04E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57866 PF00808 CBFD_NFYB_HMF 3.90E-22 CL0012 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00661 K21751 - jre:109017784 288.5