Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00716 ATGGGTTTCAACCTGGGCTCTTTCCTGACATCAATGCTAAAATCCAACCCGGGCGAAGTTAATGTCGATTCGACAACCTTATTTGTGTTGCTTCTCTGTGCTTGTGTCGTTATTGGTCATCTTCTCGAGAAGAACCGTTACATGAACGAGTCGATTACTGCCTTAGCGATTGGTCTTTTCACGGGGATCGTCATTTTATTTTCGACTGAAGGAAAAAGCTCTCATCTCTTGGTGTTTAATGAACAGCTATTCTTCATCTATCTTCTTCCACCGATCATTTTTAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCAGAAATTTCTTGACAATTGTTTTGTTTGGTGCCGTTGGTAGCTTGATATCTTTTTTCATCATAACGATAGGTTCAATGTATTTGTTCGAGAAATTGGATGTTGGCTTCTTAGAGGTGGCTGATTATTATGCACTTGGAGCGATCTTAACTGCAACCGATACGGTTTGTACATTGCAGGTGCTTAATCAGGATGAGACGCCTTTGCTGTACAGTCTAGTCTTTGGTGAAGGTGTAGTCAACGATGCGACTTCTGTGGTTCTTTTCCACGCAATCCGGAAATTCGACCTTTCCCACATTACTTCGATCAATGCCATTCAACTAGTTGGCAATTTCTTCTATTTGTTCTTGACTAGCACATTGCTGGGGATAGCCGTCGGTTTGCTCAGTGCTTATATCATTCGGAAACTGTACCTTGGCAGGCACTCTGCGGATCGGGAAATTGCTCTAATGATTCTAATGGCTTATCTTTCATATATGTTGGCCGAACTGTGCCTTTTAAGCGGTATTCTTACCGTCTTCTTCTGTGGGATCGTCATGTCGCACTACACCTGGTATAACGTGACGAAGAGTTCAAAGGTCACTACCAAGCATGCTTTTGCAACACTATCATTTATTTCAGAGATTTTCATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAAATTTGTACTCAAGAGCCCTGGGACGTCAGTTACTGTGAGTTTAATACTGTTCGGTCTGGTTCTTGTTGGAAGAGCGGCTTTTGTCTTCCCTCTCTCTTTCGTAGCCAACTTGAGCCGGAAGCATAAGAGCGACAAAATCGGGTTCAGGAAGCAGATTACAATTTGGTGGGCTGGACTGATGAGAGGTGCTGTATCCGTGGCACTTGCTTATGATCATTTTACGAGATCAGGACAAACCCAACTTCGAGGGAACGCGATCATGATCACGAGCACGATAAGCATTGTTCTCTTTACAAATATGGTATGTGGATTATTGACTAAGCCTCTGATACGGCACTTGCTTCCATCAAGTAGACCAAGAGAAGACGCCTCTGCACTCTCGGACTCTCCTGCACTCTCTACCCCACTTCTCTCGTACGGGCCCGGTCAAGAAGATCAAGGACTTGATACGAGTGGCGACTCGGCTCTCGGACCACAACCGAGGAGCTTGTCAGGCTCCATTCATCACTACTGGCGATTGCTGGACGATGCTTATATGCGGCCCTTGTTTGGGGGAAGAGGTTTCGTGCCGAACATTCCCACTTCGATATTCGATAAGTTTATACGATGA 1602 44.57 MGFNLGSFLTSMLKSNPGEVNVDSTTLFVLLLCACVVIGHLLEKNRYMNESITALAIGLFTGIVILFSTEGKSSHLLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFLTIVLFGAVGSLISFFIITIGSMYLFEKLDVGFLEVADYYALGAILTATDTVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFHAIRKFDLSHITSINAIQLVGNFFYLFLTSTLLGIAVGLLSAYIIRKLYLGRHSADREIALMILMAYLSYMLAELCLLSGILTVFFCGIVMSHYTWYNVTKSSKVTTKHAFATLSFISEIFIFLYVGMDALDIDKWKFVLKSPGTSVTVSLILFGLVLVGRAAFVFPLSFVANLSRKHKSDKIGFRKQITIWWAGLMRGAVSVALAYDHFTRSGQTQLRGNAIMITSTISIVLFTNMVCGLLTKPLIRHLLPSSRPREDASALSDSPALSTPLLSYGPGQEDQGLDTSGDSALGPQPRSLSGSIHHYWRLLDDAYMRPLFGGRGFVPNIPTSIFDKFIR 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45234376 45239730 - Bma029805.1 Bma09g00716 88762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00716 533 Gene3D - 144 195 - -
Bma09g00716 533 PRINTS Na+/H+ exchanger signature 152 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma09g00716 533 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma09g00716 533 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma09g00716 533 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bma09g00716 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 529 - -
Bma09g00716 533 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma09g00716 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 529 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bma09g00716 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 444 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01064 Bma-Chr5:49333712 Bma09g00716 Bma-Chr9:45234376 0 dispersed
Bma09g00716 Bma-Chr9:45234376 Bma14g00316 Bma-Chr14:3944965 1.81E-180 dispersed
Bma09g00716 Bma-Chr9:45234376 Bma05g00316 Bma-Chr5:9974003 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00716 - K14724 csv:101206431 730.709