Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00750 ATGGCTTCCAAATCCCACCTGCTTTTTTTGGCGGCGACTCCATTTTTATTTCTTCTTCTAGTTTCTGCAGATGTTCCTCCGACTACTCCGGTGACTACTGGTTCCATTTGCGGGTCGACCAAAGATCCTTCCTTCTGCAAAGATGTGCTCCCCAATGGAACCGGAAATGTCTACGATTTCTGCCGGTTGTCGGTCCGGAAGTCACTGTCGCAGTCGAGAAAGTTCCTGAGCTTAGTAAATAAGTATCTCCGTCGACGGTCTTCCTTAACTTTGACAGCCATTAGAGCTCTCGAAGATTGCCAGTTTCTAGCAGAGTTAAACATGGATTATTTATTGACCTCATTCCGAACGGTGAACGCTTCCGGGGTAACTCTTCCGGAAATGCAAGCTGATTACTTGCAGACTTTGCTCAGCGGATGTTTGACTAATCAACAGACCTGTTTAGAAGGTTTAAAATCGACTGCTTCGGCTTGGAGTTTGAGAGATGGACTCGCTCTCCCTCTCGCTAATGATACTAAGCTTTACAGTGTTTCGTTAGCTCTGTTTACCAGAGGGTGGGTGTCCAAGAAGAAGAAGAAGAAAAGCTCGTCTTCGTGGATCCCGTCCAGGAAGCATCTGGGGTTCAGAAAGGGGCACGGGCACCTGCCGATGAAAATGTCGGCCCGAACTCAGGCTATTTACGAGAAATTCAAACGGAGGAACCTGCTGCAGACGGAGGGCGACGAAGACGATGATTCGGTTACACTTGCTGATATTGTGGTGGTTAGCCAAGATGGGAGTGGAAACTTCACCACCATTAACGACGCCATTGCTGCAGCTCCGAATAACTCGGTCATCGACGACGGGTATTTTTTGATATACGTACCAGCCGGCGTTTACGAAGAGTACGTTTCCATTGCGAAAAATAAACGGTATTTGATGATTGTCGGAGATGGTATAAATCAGACGATTATCACCGGTAACAGAAGCGTCGTCGATGGGTGGACTACTTTCAACTCTGCAACTTTCGCTGTAGTCGGGCCAGGATTCATCGGAATGGACATAACCATCAGAAACACTGCCGGAGCAATAAAACACCAGGCCGTCGCGCTCCGAAACGGAGCCGACTTATCAGTCTTCTACAGCTGCAGCTTCGAAGGCTACCAAGACACTCTCTACACCCACTCCCTCCGACAATTCTACAGAGAATGCGACGTCTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTCGTCCTCCAAAACTGCAACCTCTACCCTCGGCTCCCACTATCCAACCAATTCAACGCCATTACAGCTCAAGGAAGAACAGACCCGAACCAAAACACCGGGACTTCGATCCACAACTGCACAATCGTAGCCGCCGACGATCTTGCTTCCAGCAACAGCGGCATTCAGACCTACCTGGGCAGGCCGTGGAAAGAGTATTCGAGAACGGTGTTTATGCAGAGTTATATGGGGAGTTTGATTAATCCGGCGGGTTGGAGAGCTTGGGACGGCGACTTCGCTCTGAAAACGTTGTCCTACGCCGAGTTTAACAATTCAGGACCGGGATCTAATACCAGCGGAAGAGTTACGTGGGATGGATACCACGTGATTAATTCCACCGAGGCTGCGAACTTTACGGTTTCTACGTTCTTGCTGGGAGATGATTGGTTGCCCCAAATCGGAATCCCTTATTCTGCAGGCTTGATCAGCTAA 1704 49.47 MASKSHLLFLAATPFLFLLLVSADVPPTTPVTTGSICGSTKDPSFCKDVLPNGTGNVYDFCRLSVRKSLSQSRKFLSLVNKYLRRRSSLTLTAIRALEDCQFLAELNMDYLLTSFRTVNASGVTLPEMQADYLQTLLSGCLTNQQTCLEGLKSTASAWSLRDGLALPLANDTKLYSVSLALFTRGWVSKKKKKKSSSSWIPSRKHLGFRKGHGHLPMKMSARTQAIYEKFKRRNLLQTEGDEDDDSVTLADIVVVSQDGSGNFTTINDAIAAAPNNSVIDDGYFLIYVPAGVYEEYVSIAKNKRYLMIVGDGINQTIITGNRSVVDGWTTFNSATFAVVGPGFIGMDITIRNTAGAIKHQAVALRNGADLSVFYSCSFEGYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRLPLSNQFNAITAQGRTDPNQNTGTSIHNCTIVAADDLASSNSGIQTYLGRPWKEYSRTVFMQSYMGSLINPAGWRAWDGDFALKTLSYAEFNNSGPGSNTSGRVTWDGYHVINSTEAANFTVSTFLLGDDWLPQIGIPYSAGLIS 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45969162 45971031 - Bma029845.1 Bma09g00750 88796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00750 567 Pfam Pectinesterase 253 551 IPR000070 GO:0030599|GO:0042545
Bma09g00750 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 184 IPR035513 -
Bma09g00750 567 SUPERFAMILY Pectin lyase-like 248 564 IPR011050 -
Bma09g00750 567 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 26 564 - -
Bma09g00750 567 Gene3D - 250 567 IPR012334 -
Bma09g00750 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Bma09g00750 567 SMART PMEI_2 26 181 IPR006501 GO:0004857
Bma09g00750 567 CDD PMEI-like_3 35 186 - -
Bma09g00750 567 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Bma09g00750 567 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Bma09g00750 567 SMART complete 288 469 IPR006633 -
Bma09g00750 567 PANTHER PECTINESTERASE 26 564 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00750 Bma15g00533 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00279 Bma-Chr1:2334681 Bma09g00750 Bma-Chr9:45969162 1.27E-125 dispersed
Bma02g01157 Bma-Chr2:53565311 Bma09g00750 Bma-Chr9:45969162 7.50E-139 dispersed
Bma03g00763 Bma-Chr3:6977631 Bma09g00750 Bma-Chr9:45969162 6.45E-08 dispersed
Bma09g00750 Bma-Chr9:45969162 Bma10g00666 Bma-Chr10:9652008 4.86E-126 dispersed
Bma15g00533 Bma-Chr15:6156349 Bma09g00750 Bma-Chr9:45969162 8.15E-142 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00750 K01051 - tcc:18613597 814.683