Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00765 ATGGAATCTGGACGTTGGTATCATAAGCTTCAACCACGAGATAAGTTGAGGACTTTATCAAAGAGGAAGGATGTTGAAGGTGGAAGCAAGGAAGACTCGAATCTGTCAGCTGATGAAGAAGCTCTTTCCAATGCTACAAAACAGAAGGCTGAAGCAGCGAAGCAGTTTATTGAGAATCACTACAAGGAGCAAATGAAGAACCTGCAGGACAGGAAGGAGAGACGAAATAACTTGGAAAAGAAGTTGGCTGATGCTGATGTTTCCGAGGAAGATCAGAACAATCTCCTCAAATTCTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGGCAAAAAATGGGTGTGGATGATTTTGAATTAATGTCAATGATTGGAAAAGGCGCTTTTGGAGAGGTATTAGAAGTTTCGTTCATTTCATCGCCCCATATTGTATGTGGAAAATGTATAGTTTGTAGGGAGAAGACTACAGGTCATGTATATGCTATGAAAAAACTAAAGAAATCAGAAATGCTTCGAAGGGGACAGGTAGAGCACGTGAAAGCTGAGAGAAATTTGCTTGCTGAGGTGGAGAACAACTGCATAGTCAAACTTTACTGTTCTTTTCAAGACGATGACTATCTTTATCTCATCATGGAATATCTACCTGGTGGTGATATGATGACTTTACTTATGAGGAAAGATACTTTGACTGAGGAGGAAGCCAGATTTTACATTGCAGAAACAGTTTTAGCTATCGAATCCATCCATACACACAATTATGTTCATAGGGATATCAAGCCTGACAACTTGCTGCTTGATAGATATGGACACTTAAGACTGTCAGATTTTGGGTTATGTAAACCCTTAGACTGCAGCACAATCCAAGAACACGATTTTTCAGTAGGTAACAGTTCCAATGGGTCAGGACAGAATGATGATCGCTCTGTGGCTCCTAACCGTACACAACAAGAGCAACTGCAACATTGGCAAAGGAATCGAAGAATGCTTGCTTATTCCACTGTTGGCACACCAGACTATATAGCTCCTGAGGTTCTGTTGAAGAAAGGTTATGGATTGGAATGTGATTGGTGGTCCCTGGGTGCTATAATGTATGAAATGCTGATTGGCTATCCACCTTTTTATTCTGATGATCCCATGTCAACATGCAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTTCCTGAAGAAGCAAAGTTATCTCAAGAGGCAAAAGATCTGATTAGTAAGCTCCTGTGTAACGTTGGCCAGAGACTAGGGTCAAAAGGCGCATTTGAGATTGAGGCTCATCCATGGTTTCAAGGTATTGAATGGCATAAGCTATATCAAATAGAAGCTGCTTTCATTCCTGAGGTAAATGACGAGCTGGATACCCAAAATTTTGAGAAGTTTGAAGAGCTTGACAACCAGAATAACCCGTCCTCAAAAACTGGTCCTTGGAGAAGGATGCTCTCATCCAAGGATATTAATTTCGTTGGCTATACATACAAGAATTTCGAGATAGTAAATGACTATCAAATGCCTGGGACTGTTGAGCTGAAGAAGAAAAACACCAAATCGAGAAGACCATCCATCAAGTCACTTTTCGGTGTGCACGAACTTTTTAACGCGATTGTTTGTCTGACAATATTCATTTCCTTTTCTGGGCATTTGTACCTTATTATCTTGGCATTTTCATCATAG 1686 40.33 MESGRWYHKLQPRDKLRTLSKRKDVEGGSKEDSNLSADEEALSNATKQKAEAAKQFIENHYKEQMKNLQDRKERRNNLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRQKMGVDDFELMSMIGKGAFGEVLEVSFISSPHIVCGKCIVCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVENNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYIAETVLAIESIHTHNYVHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTIQEHDFSVGNSSNGSGQNDDRSVAPNRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLIGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSQEAKDLISKLLCNVGQRLGSKGAFEIEAHPWFQGIEWHKLYQIEAAFIPEVNDELDTQNFEKFEELDNQNNPSSKTGPWRRMLSSKDINFVGYTYKNFEIVNDYQMPGTVELKKKNTKSRRPSIKSLFGVHELFNAIVCLTIFISFSGHLYLIILAFSS 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46175670 46184110 + Bma029864.1 Bma09g00765 88811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00765 561 MobiDBLite consensus disorder prediction 1 37 - -
Bma09g00765 561 Gene3D Transferase(Phosphotransferase) domain 1 333 452 - -
Bma09g00765 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 536 - -
Bma09g00765 561 Pfam Protein kinase domain 146 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00765 561 CDD STKc_NDR_like 117 498 - -
Bma09g00765 561 MobiDBLite consensus disorder prediction 294 319 - -
Bma09g00765 561 Coils Coil 35 88 - -
Bma09g00765 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 435 507 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma09g00765 561 SMART serkin_6 119 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00765 561 Pfam Protein kinase C terminal domain 453 497 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bma09g00765 561 MobiDBLite consensus disorder prediction 1 51 - -
Bma09g00765 561 Gene3D Phosphorylase Kinase; domain 1 90 218 - -
Bma09g00765 561 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 26 536 - -
Bma09g00765 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bma09g00765 561 SUPERFAMILY Protein kinase-like (PK-like) 93 487 IPR011009 -
Bma09g00765 561 Gene3D Phosphorylase Kinase; domain 1 453 463 - -
Bma09g00765 561 ProSiteProfiles Protein kinase domain profile. 119 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00765 561 SMART pkinase_C_6 435 499 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma09g00765 561 Gene3D Transferase(Phosphotransferase) domain 1 219 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00765 Bma-Chr9:46175670 Bma08g00193 Bma-Chr8:2310372 6.49E-61 dispersed
Bma01g02206 Bma-Chr1:78977697 Bma09g00765 Bma-Chr9:46175670 0 transposed
Bma05g00072 Bma-Chr5:2579265 Bma09g00765 Bma-Chr9:46175670 0 transposed
Bma05g01065 Bma-Chr5:49339079 Bma09g00765 Bma-Chr9:46175670 0 transposed
Bma07g00553 Bma-Chr7:7524914 Bma09g00765 Bma-Chr9:46175670 0 transposed
Bma08g00108 Bma-Chr8:1284572 Bma09g00765 Bma-Chr9:46175670 2.76E-64 transposed
Bma11g00453 Bma-Chr11:5298690 Bma09g00765 Bma-Chr9:46175670 0 transposed
Bma15g00522 Bma-Chr15:6002312 Bma09g00765 Bma-Chr9:46175670 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66707 PF00069 Pkinase 4.00E-58 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00765 K08790 - tcc:18613112 879.782