Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00766 ATGGAGTCCTCCCTTTTAGGCGAGTTAGTGGTGAAGAAAACTGGCTCGAAACCTTGTTTTGATGCCAGTAGCGGGATTCATCAATTGAACGTCGGTCTTCGATATCGTGAAGAATTAAGCAAGGTAGATGAGTACGGATTAACTCTGATTAGTCTCTTGTTCGAGTGCGCCGTAGCGATCTCTGTCGATAATCTGGCGGATGCGCATCGAATGCTGCTTGAACTAACGCAAATTGCGTCTCCGTATGGATCGTCGTGCGCAGAGCGAATCGTTGCGTATTTTGCCAAGGCCATGGCTAGTAGAGTCATAAACTCCTGGTTAGGTATATATTTTCCTCTGATCAACCATAAGAGCATCCATGGCGCTCTACAGGTCTTCAACGACGTCTCTCCCTTCATCAAATTCGCGCATTTCACTTCCAACCAAGCAATTTTCGAGGCCTTTCACGGCCGCGATCGAGTTCACATCGTCGATCTCGACATCATGCAAGGTCTACAATGGCCGGCTCTATTTCACATGCTCGCCTCTCGTGTCGAAGGCCCGCCTAAAATGAGAATGACCGCCATCGGAACGTCAATGGAACTTCTAGTCGAAACCGGAACGAAACTCTCGAATTTCGCTCGGAAAATGGGAATATCTTTCGAGTTCTACCCGATCGCCAGAAAATTTGGGGAAATCGAAGCTTCCATGTTGCAATTGAGGCGGGGAGAAACACTAGCTGTGCACTGGCTACAACATTCGCTCTACGATTTCAACGGCTCCGATTGGAAAACACTGAGCCTAATCCAAACATTCAAGCCCAAAATCTTCACCCTAGTAGAACAAGACATCATTCGCGGCGGTTCATTTCTCGATCGTTTCGTCGGTTCTCTGCACTACTATTCGTCCATTTTCGACTCCCTCGGAGCTTACCTTCCGACGGACGATCCAAACCGGCACCACGTCGAGAGCTCCCTCCTGTACAGAGAAATCAACAACATATTGGCGATCGGAGGGCCGTCGCGGAGCGGAGAGGAGAAGTTTGAACAGTGGAGGAGCGAATTGAGGAAGAGTTTAACGGGAGTTCCGGCTAGCGGAAACTCAATTTGTCAAACGCAGTTGATGTTGAGCATGTTTTCTCCGGCTCAAGGTTACACGCTCGTCAATGGCGATTTAGGGACTCTGAGTCTTGGTTGGAAGGGCACCAATCTGTACACAGCTTCTTCATGGACTTCTCCTCTTCCATCCTAA 1230 48.86 MESSLLGELVVKKTGSKPCFDASSGIHQLNVGLRYREELSKVDEYGLTLISLLFECAVAISVDNLADAHRMLLELTQIASPYGSSCAERIVAYFAKAMASRVINSWLGIYFPLINHKSIHGALQVFNDVSPFIKFAHFTSNQAIFEAFHGRDRVHIVDLDIMQGLQWPALFHMLASRVEGPPKMRMTAIGTSMELLVETGTKLSNFARKMGISFEFYPIARKFGEIEASMLQLRRGETLAVHWLQHSLYDFNGSDWKTLSLIQTFKPKIFTLVEQDIIRGGSFLDRFVGSLHYYSSIFDSLGAYLPTDDPNRHHVESSLLYREINNILAIGGPSRSGEEKFEQWRSELRKSLTGVPASGNSICQTQLMLSMFSPAQGYTLVNGDLGTLSLGWKGTNLYTASSWTSPLPS 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46189977 46191206 + Bma029865.2 Bma09g00766 88812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00766 409 Pfam GRAS domain family 49 404 IPR005202 -
Bma09g00766 409 ProSiteProfiles GRAS family profile. 40 404 IPR005202 -
Bma09g00766 409 PANTHER OS05G0485400 PROTEIN 40 405 - -
Bma09g00766 409 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 40 405 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00766 Bma-Chr9:46189977 Bma14g01585 Bma-Chr14:32684803 4.61E-134 dispersed
Bma09g00766 Bma-Chr9:46189977 Bma14g00583 Bma-Chr14:6329094 1.67E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57872 PF03514 GRAS 1.30E-100 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00766 - - pop:7476930 583.563