Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00925 ATGAGTGTTAATTCTAAGAGAGTGGAGAATTTTGACGGCCGGGAAAGGCCGATTGTGATAAACATGGAGGAGATTCCGGCAATGGAGATCCACCAGGTTTGTCTGCCGGAGAAGCGGAGTACTTTTCAGAAACTGAAGCATAAGCTTTCGGAGGTTTTCTTCCCCGACGACCCACTTCACAGATTCAAAGACCAAAAATGGCTGACGAAACTAAATCTGGGTCTTCAGTTCTTTTTTCCGATATTTCAGTGGGGCCCTCAGTACAACATCGGATATCTGAAGGCTGATGTTGTCTCTGGTCTCACCATCGCTAGTTTGGCCATCCCTCAGGGGATCAGTTACGCAAAGCTTGCAGACTTGCCTCCGATCATCGGTCTATATTCAAGCTTTGTTCCTCCATTGATATATTCATTTCTCGGGAGCTCAAGACATCTCGCGGTTGGTCCAGTTTCGATTGCTTCTCTCGTAATGGGTTCCATGCTCAGCGAGAAAGTTTCTTTCATTAAAGACCCTTCTCTGTATCTTAAACTGGCCTTCACTGCCACCTTTTTCGCCGGCCTCTTTCAAACCTCTCTGGGTTTACTCAGGCTTGGATTCATAATAGATTTTCTATCAAAGGCAACTTTAGTCGGCTTCATGGCCGGAGCAGCCGTCATTGTCGCCCTCCAACAACTCAAAGGGCTGCTTGGGATTGCCCATTTCACCACCAAGATGCAGTTCGTTCCAGTCATGTCCTCAGTTTTTAACAACAGACAAGAGTGGTCGTGGCAAACAATGGTGTTAGGCTTCAGCTTCCTGATCTTCCTTCTGATAACAAGGCATGTTAGCTTGAAGAAGCCGAAAGTCTTCTGGGTCTCATCAGCAGCTCCGTTGACATCCGTCATCTTGTCGACTCTCATCGTATTCCTCCTCCGATCGACGGCTCACGGAATCTCAATAATTGGCGATTTGCCAAAAGGATTGAACCCACCATCTTCGAACATGCTGTTCTTTACTGGTCCACATCTTGCACTAGCCATTAAAACTGGCATTATTACTGGAATTCTATCTCTCACCGAAGGAATTGCTGTTGGAAGAACATTTGCTTCTATGAAAAACTACCAGGTTGATGGAAACAAAGAGATGACGGCGATTGGGCTGATGAACATGGCTGGTTCATGCACTTCATGCTATGTCACCACAGGCAATGTGCAATCGGCCATAAATTACAATGCTGGAGCAGAAACAGCCATAGACTACCAAGCCGCATATAAGCTGTGGAAAGTAGATAAACTCGATTTCTTGGCCTGCATTTGTTCGTTCTTCGGTGTGCTTTTCATCTCTGTCCCGACCGGACTTGGAATTGCAGTCGGAGTTTCTATGGTCAAGATCCTTCTTCACGTCACGAGGCCAAACACGACGGCCTTAGGGAATATTCCGGGGACTCAAATCTACCATAGCCCGAACCATTACAGAGAAGCATTGAGAGTTCCTACATTTCTCATTCTTGCAGTCGAGGCTCCAATGTACTTTGCGAATTCGACATACCTCCAAGAACGGATTTTAAGATGGGTTAGAGAGGAAGAAGAACGGATAAAGGCAAACAAGGAAGACTCACTTAAATGTGTAATCTTAGACATGACTGCCGTGACGGGCATAGATTCGAGTGGCATCGAGACGTTATGCGAGCTAAAGAAGATGTTGGACAAAAGATCAATACAGATTGTTCTAGCCAATCCTGTTGGAAATGTAATGGAAAAGCTAGATCAAGCAGATGCATTGGAATCATTTGGGATGCAAGGTCTTTACCTGACAGTTGGAGAAGCTGTTTCCGACATCTCTTGTTTGCGGAAGGCTCGTCCATGA 1845 45.8 MSVNSKRVENFDGRERPIVINMEEIPAMEIHQVCLPEKRSTFQKLKHKLSEVFFPDDPLHRFKDQKWLTKLNLGLQFFFPIFQWGPQYNIGYLKADVVSGLTIASLAIPQGISYAKLADLPPIIGLYSSFVPPLIYSFLGSSRHLAVGPVSIASLVMGSMLSEKVSFIKDPSLYLKLAFTATFFAGLFQTSLGLLRLGFIIDFLSKATLVGFMAGAAVIVALQQLKGLLGIAHFTTKMQFVPVMSSVFNNRQEWSWQTMVLGFSFLIFLLITRHVSLKKPKVFWVSSAAPLTSVILSTLIVFLLRSTAHGISIIGDLPKGLNPPSSNMLFFTGPHLALAIKTGIITGILSLTEGIAVGRTFASMKNYQVDGNKEMTAIGLMNMAGSCTSCYVTTGNVQSAINYNAGAETAIDYQAAYKLWKVDKLDFLACICSFFGVLFISVPTGLGIAVGVSMVKILLHVTRPNTTALGNIPGTQIYHSPNHYREALRVPTFLILAVEAPMYFANSTYLQERILRWVREEEERIKANKEDSLKCVILDMTAVTGIDSSGIETLCELKKMLDKRSIQIVLANPVGNVMEKLDQADALESFGMQGLYLTVGEAVSDISCLRKARP 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 48649694 48652879 + Bma030060.1 Bma09g00925 88971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00925 614 Pfam Sulfate permease family 93 411 IPR011547 GO:0016021
Bma09g00925 614 Pfam STAS domain 484 602 IPR002645 -
Bma09g00925 614 CDD STAS_SulP_like_sulfate_transporter 484 599 - -
Bma09g00925 614 ProSiteProfiles STAS domain profile. 483 606 IPR002645 -
Bma09g00925 614 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Bma09g00925 614 PANTHER SLC26A/SULP TRANSPORTER-RELATED 411 614 - -
Bma09g00925 614 Gene3D STAS domain 463 607 IPR036513 -
Bma09g00925 614 PANTHER SLC26A/SULP TRANSPORTER-RELATED 18 411 - -
Bma09g00925 614 PANTHER SULFATE TRANSPORTER 18 411 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma09g00925 614 PANTHER SULFATE TRANSPORTER 411 614 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma09g00925 614 SUPERFAMILY SpoIIaa-like 488 604 IPR036513 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00925 Bma15g00384 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00925 Bma-Chr9:48649694 Bma15g00030 Bma-Chr15:327736 0 dispersed
Bma05g00469 Bma-Chr5:16953664 Bma09g00925 Bma-Chr9:48649694 2.26E-85 transposed
Bma15g00384 Bma-Chr15:4273098 Bma09g00925 Bma-Chr9:48649694 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00925 K17471 - zju:107405210 935.25