Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00970 ATGAGGCTGATGAGATGCTTTCTCGTGGATTCAAGGATCAGATCTATGACATTTTCCAGCTGTTGCCGTCAAAAGTTCAGGTTGGAGTTTTCTCTGCCACAATGCCACCCTGAAGCTCTGGAAATCACGAGGAAGTTCATGAACAAACCCGTAAGAATCTTGGTAAAGCGTGATGAACTTACTCTTGAGGGTATCAAGCAATTCTATGTCGATGTTGACAAGGAAGATTGGAAACTTGACACACTCTGTGATCTCTACGAGACTTTGGCTATAACCCAAAGTGTTATCTTTGTCAACACTCGTCGCAAGGTCGATTGGCTCACAGACAAGATGCGGAGCCGTGACCACACTGTCTCTGCCACCCACGGAGACATGGACCAGAACACCAGAGACATAATCATGCGAGAATTCCGCTCTGGGTCTTCTCGAGTTCTCATCACCACCGATCTCCTGGCTCGTGGTATTGATGTCCAGCAAGTTTCCCTCGTCATAAACTACGATCTGCCGACTCAACCGGAGAATTATCTTCATCGTATCGGTCGAAGTGGACGATTTGGAAGAAAGGGTGTGGCCATTAACTTTGTCACTGGTGATGATAGCAGAATGCTGTACGACATTCAGAAGTTCTACAATGTGGTGATTGAGGAGTTGCCCGCAAATGTTGCCGATCTCCTGTAA 678 46.76 MRLMRCFLVDSRIRSMTFSSCCRQKFRLEFSLPQCHPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVDVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTGDDSRMLYDIQKFYNVVIEELPANVADLL 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49221058 49221956 - Bma030113.1 Bma09g00970 89016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00970 225 Pfam Helicase conserved C-terminal domain 78 186 IPR001650 -
Bma09g00970 225 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 64 225 IPR001650 -
Bma09g00970 225 PANTHER EUKARYOTIC INITIATION FACTOR 4A-11 36 225 - -
Bma09g00970 225 PANTHER RNA HELICASE 36 225 - -
Bma09g00970 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 221 IPR027417 -
Bma09g00970 225 Gene3D - 57 225 IPR027417 -
Bma09g00970 225 CDD SF2_C_DEAD 65 195 - -
Bma09g00970 225 SMART helicmild6 105 186 IPR001650 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00970 Bma-Chr9:49221058 Bma10g00922 Bma-Chr10:18648748 3.18E-95 dispersed
Bma15g00923 Bma-Chr15:33243978 Bma09g00970 Bma-Chr9:49221058 5.80E-08 transposed
Bma15g00330 Bma-Chr15:3207888 Bma09g00970 Bma-Chr9:49221058 2.57E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00970 K03257 - csv:101221456 369.007