Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00971 ATGGCGCTCTCTTCCTCGACAAACGTTTCGCAAGGCAGCATCGGCGCCGCCGTAGTGATTGCGATTGACAAGGATAAGAATAGCCATTATGCTGTAAAATGGGCCGTCGAGAACCTTATTGCTGGCCGCGGTAACAACCCCGTTTGCATTCTCGTTCATGTTCGGAGCCAAAGCTTGCATCCCCAGGATGTCGACTCAGCTCCCATGGAAGGTCGTCCACCTACGGAAGCTGAATTGCAACAGTTCTTCCTCCCCTTCCGCGGATTCTGTGCAAGAAAAGGGATTCAGGCAAGGGAGGTTGTCCTCCACGACATTGACGTTCCGAGCGCGCTAGTTGACTATGTCGAAAACAACTCTGTCACCAATATCGTCGTGGGTGCTTCCAACCGCAATGCTATTCTCAGGAAGTTTAAGAGTATAGACGTGCCGACTAGCTTGCTGAAATCTGCACCAGATTCGTGTTCTATATACGTCATATCTCGAGGAAAAGTTCAGAGTAGTAGAATTGCCAAGTCCAGAAGGAAAACCGACGAGGCAAGTCCGCCTCAAAGTAAGGGAGGAACTCCTCCTCAAAGTAAGGGAGGAACTCCGCCTCAAAGCTCGTTTCGGCATAAGACATCTAACTCTCCTCCGAATTCTTCAGACTCTGAAGAGAAACACAGTTGGAGAGATACTGGCTATGACAGAGGAGATTTGGTGCAAACAAGCCATGGCAGGTACACATCCAATATGAGCAACGAGTCACTGGGAATGTCAATGGACAGTTTCGTCTCTGGAAATTCATCCCATCAAAGTTCATTGTCTGGATTCAGTGATTTTTCCGGCCCACTTAGTTACAGATCAAGTGACTCGTTGTCTGATAATATCGAATATCCTCTGCCCTCAGAGACGAGTTCTAAGTCGAGGAATTCTATGACGCATGCGTCATCTCCGTTGGAAGCCGAAATGAGGAAGCTTAAACTTGAATTGAAGCAGACCATTGAAATGTATGACTCCGCCTGCCAAGAAGCTGTTGCAGCAAATCATAAGGCACGGGAACTTCAAATACTGAGGACAAAGGAAGAAAAGAAACTGGAACAAGCCAAGATTGCGGAAGAGACTGCACTGGCTTTAGCAGAGGCAGAGAGGCAAAAAACAAAGACTGCAACAGAAGCTGCAGTGATGGCACAGCGCCTTGCGGAGATGGAGACTGAGAAGAGGAAATATGCAGAGATGACGGCAGTGCATGAAGCAGAAGTGAAGCAGAAAGCGATGGATGCATTGGCACAGCAAAATATCAGGTGTAGAAGGTACAGCATTGAAGATATTGAGGTTGCAACGGATTATTTTAACAGTTCGAACAAGATTGGCGAAGGTGGGTATGGACCCGTTTATAAAGGTTTGCTCGATCACACTTCTGTTGCCATAAAAGTATTGAGGCCGGATTTAGCGCAGGGGCAGAGACAGTTCCAACAAGAGGTTGAAGTTCTGAGCTGCATAAGGCACCCGCATATGGTTCTCCTCCTAGGGGTCTGCCCAGAATACGGCTGCCTTGTTTACGAGTATTTGGAAAACGGAAGCTTGGAGGACCGTCTCTTACTGAAAGACGGCACTCCTCCAATTCCCTGGAAAACCCGCTTCAAAATTGCTTCCGAAATAGCAACTGCTCTTCTTTTCCTCCACCAGACCAAACCTGAGCCACTGGTCCATCGAGACCTCAAACCTGCCAACATTCTCCTAAACCGCAGCTACGTGAGTAAGATCAGCGATGTGGGTCTCGCTCGGTTAGTCCCATCTTCGGCCGCTGACAGTGTCACTCAATATCTCATGACTGCAGCTGCTGGAACCTTCTGTTATATCGACCCCGAGTATCAACAAACTGGACTTTTGGGCGTTAAATCGGATATATACTCGTTTGGTGTAATGTTGTTACAGATCATTACTGCAAGATCTCCTATGGGTCTTTCTCATCGGGTTGAGCAGGCCATTAAAGATGGAAAACTAGCACAAATGCTCGATCCAGCGGTGAAAGATTGGCCTGTCGACGAGACCTTATCGTTTGCTAAGTTGGCTCTGAAGTGCTGCGAGTTGCGGAAGAAGGATAGACCCGATCTGGGTTCGGTTGTGCTGCCCAAGCTCATCAAGCTGAGAGACATTGAATTTAGCAATAATCCAGCTCCAAATAACCTCAGTTTTACTCCCCAACAACGTCGATATAAGTCAGTTCCTCAGCTGGGCTCTCCACAAGATCAGGAAGGAATGAAAAACAAACCTAATGTGGAAATGGAATTCAACTTAGATCAAAGCAAGGAGAAGGTGGCAGGCCATAAAGTCTATGACCCGAAAATGGAGCTCGAAGAACAGCTTTACGAGGCAAACCAGAGTCAATTTGAGCTTCAACTTGAAGAGAAACCCTGGAAAAGCCAGCCCTTTACCCCCCACAGGGAAACAAGATGGAAAACCAAACAAGAAGCAACTTGA 2460 47.48 MALSSSTNVSQGSIGAAVVIAIDKDKNSHYAVKWAVENLIAGRGNNPVCILVHVRSQSLHPQDVDSAPMEGRPPTEAELQQFFLPFRGFCARKGIQAREVVLHDIDVPSALVDYVENNSVTNIVVGASNRNAILRKFKSIDVPTSLLKSAPDSCSIYVISRGKVQSSRIAKSRRKTDEASPPQSKGGTPPQSKGGTPPQSSFRHKTSNSPPNSSDSEEKHSWRDTGYDRGDLVQTSHGRYTSNMSNESLGMSMDSFVSGNSSHQSSLSGFSDFSGPLSYRSSDSLSDNIEYPLPSETSSKSRNSMTHASSPLEAEMRKLKLELKQTIEMYDSACQEAVAANHKARELQILRTKEEKKLEQAKIAEETALALAEAERQKTKTATEAAVMAQRLAEMETEKRKYAEMTAVHEAEVKQKAMDALAQQNIRCRRYSIEDIEVATDYFNSSNKIGEGGYGPVYKGLLDHTSVAIKVLRPDLAQGQRQFQQEVEVLSCIRHPHMVLLLGVCPEYGCLVYEYLENGSLEDRLLLKDGTPPIPWKTRFKIASEIATALLFLHQTKPEPLVHRDLKPANILLNRSYVSKISDVGLARLVPSSAADSVTQYLMTAAAGTFCYIDPEYQQTGLLGVKSDIYSFGVMLLQIITARSPMGLSHRVEQAIKDGKLAQMLDPAVKDWPVDETLSFAKLALKCCELRKKDRPDLGSVVLPKLIKLRDIEFSNNPAPNNLSFTPQQRRYKSVPQLGSPQDQEGMKNKPNVEMEFNLDQSKEKVAGHKVYDPKMELEEQLYEANQSQFELQLEEKPWKSQPFTPHRETRWKTKQEAT 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49228083 49232357 - Bma030114.1 Bma09g00971 89017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00971 819 Gene3D HUPs 14 161 IPR014729 -
Bma09g00971 819 ProSiteProfiles Protein kinase domain profile. 443 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00971 819 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 17 729 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 795 819 - -
Bma09g00971 819 Pfam Protein kinase domain 444 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00971 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Bma09g00971 819 Coils Coil 316 336 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 167 246 - -
Bma09g00971 819 Pfam Universal stress protein family 18 151 IPR006016 -
Bma09g00971 819 MobiDBLite consensus disorder prediction 720 749 - -
Bma09g00971 819 CDD STK_N 18 162 - -
Bma09g00971 819 Gene3D Transferase(Phosphotransferase) domain 1 516 717 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 720 747 - -
Bma09g00971 819 SMART serkin_6 443 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g00971 819 SUPERFAMILY Protein kinase-like (PK-like) 424 702 IPR011009 -
Bma09g00971 819 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 137 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 801 819 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 181 215 - -
Bma09g00971 819 PANTHER OS02G0152300 PROTEIN 17 729 - -
Bma09g00971 819 Gene3D Phosphorylase Kinase; domain 1 412 515 - -
Bma09g00971 819 Coils Coil 344 364 - -
Bma09g00971 819 MobiDBLite consensus disorder prediction 281 310 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00882 Bma-Chr6:43637515 Bma09g00971 Bma-Chr9:49228083 1.43E-122 dispersed
Bma06g00885 Bma-Chr6:43733074 Bma09g00971 Bma-Chr9:49228083 1.96E-101 dispersed
Bma07g00657 Bma-Chr7:11006423 Bma09g00971 Bma-Chr9:49228083 0 dispersed
Bma09g00971 Bma-Chr9:49228083 Bma11g00781 Bma-Chr11:22168228 0 dispersed
Bma09g00971 Bma-Chr9:49228083 Bma02g00064 Bma-Chr2:512939 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66711 PF00069 Pkinase 1.90E-39 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00971 - - twl:120002803 849.351