Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g00997 ATGCCCGACCCCTTCCTAAACCCTAACTCTAACATCTCTGCCTACTACCAGAACAGGGCGGCTCACAACGCTGTTGTCACCAGTGACTGGCTCGCCCAGGCGCAGGCTGCTGTTTCCCCTTACTCTCAGGACCATGCCGCTTCCGATTCTCTTGTTACGCCACCCAGTTCCGGGAATACGTTCAGCGTGATTGATGAGTTCAACAACTGGCGGAAACAGCCTGATTTGGCTGAGGCCGTCGCCGCTTTCCGGGCATTAGCCGCTGTTATTCGCACCAGTGATGCCACTACTATGATGGAGCTTGAAATTGAGCTCAAGAAAGCCTCAGATTCCCTTAAGTCTTGGGACACGACTTCCATTTCTTTAACGGCTGGCTGTGATTTGTTCATTCGCTACGTGACTAGAACTTCAGCTTTAGAATATGAGGACTTCAATTCAGCAAAGTCTCACTTAATTGAACGCGCAGAAAAATTTGGGGAGATATCATGTGAGGCACGCAAGACCATTGCAATGCTAAGTCAGGATTTCATTTTCGACGGTTGTACTATTTTGGTGCATGGATTTTCCAGAGTCGTTCTCGAAGTTTTGAAGATGGCAGCGCTGAAGAAAAAACTTTTTCGAGTATTTTGTACAGAGGGAAGACCAGACCGATCAGGGTTACGATTAGCTAATGAGCTGGTCAAGCTTGATATTCCAGTGAAGCTCCTAATTGATGCAGCCGTAGCATATTCTATGGATGAGGTTGACATGGTTCTCGTTGGGGCTGATGGAGTAGTCGAAAGTGGAGGCATAATAAACATGATGGGGACATATCAAATTGCATTAGTGGCACACGGCATGAGTAAGCCTGTATATGTTGCTGCTGAGAGCTACAAGTTTGCTCGTCTCTACCCGTTGGACCAAAAAGACATGGCCCCTGCCCTGCGCCCAATCGATTTTGGGGTACCTATCCCATCAAAAGTCGAGGTTGAAAAGTCTGCTCGGGATTACACTCCGCCCCAATATCTTACTCTGCTCTTTACAGATTTGGGTGTTCTTACTCCATCAGTTGTGAGTGATGAGCTCATCCAACTATACTTGTAA 1083 47.37 MPDPFLNPNSNISAYYQNRAAHNAVVTSDWLAQAQAAVSPYSQDHAASDSLVTPPSSGNTFSVIDEFNNWRKQPDLAEAVAAFRALAAVIRTSDATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFIRYVTRTSALEYEDFNSAKSHLIERAEKFGEISCEARKTIAMLSQDFIFDGCTILVHGFSRVVLEVLKMAALKKKLFRVFCTEGRPDRSGLRLANELVKLDIPVKLLIDAAVAYSMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHGMSKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49489944 49492209 - Bma031545 Bma09g00997 89043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g00997 360 Pfam Initiation factor 2 subunit family 74 348 IPR000649 GO:0044237
Bma09g00997 360 Coils Coil 98 118 - -
Bma09g00997 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
Bma09g00997 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 360 - -
Bma09g00997 360 Gene3D - 59 161 IPR042528 -
Bma09g00997 360 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 360 - -
Bma09g00997 360 Gene3D - 164 360 IPR042529 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01038 Bma-Chr6:47213299 Bma09g00997 Bma-Chr9:49489944 7.36E-21 dispersed
Bma07g00574 Bma-Chr7:8005725 Bma09g00997 Bma-Chr9:49489944 5.74E-08 dispersed
Bma09g00660 Bma-Chr9:44211172 Bma09g00997 Bma-Chr9:49489944 3.05E-15 dispersed
Bma09g00997 Bma-Chr9:49489944 Bma01g00403 Bma-Chr1:3357723 4.09E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g00997 K03239 - csv:101211420 600.897