Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma09g01001 ATGTCTTATCAGCTCCCACCAAACCTGCAGCGATTAAATCTTGCTCGTAATAAATTCAATGGAAACATTCCCTATTCAGTTACTACCATGACCTCTCTCAAGTATTTAAACGTCAGCTATAATCAGATTCAGGACTTGTTTGATATCTTTGGCCAGCTTTCTTCCCTCTCTACACTGGATCTCTCTTTTAATTCCTTCTCGGGCAACCTCCCGGAGGGTTGTAGCTCCCTTTCAAGTATGAGCACAATGTATTTGCAAAACAACCATTTCAATGGCACTATTAATGTTCTTGCTAATCTTCCTCTCCAGCATCTGAATATCGAAAACAATCATTTTACCGGCTGGATTCCAGAACGGCTAAAAAACATCAATCTGCAGAAAGATGGTAACTCTTTCAGTTCTGGTCCGGCGCCCCCTCCCCCGCCTTATTGGCCTCCGTCGAACCAATATAATAACGCAGACCGCAATCACAATCAATCAAATCAAAATCAAAATCAATCGGACGGTGGCGGAAAGTCGGGAATAGGAGGAGGTGGAATTGCGGGTATCGTGATATCCCTTCTTTTAGTTGGAGGTATAATAGCAGCCTTCTTTCTCATGAAGAGAAGATCAAGGTCATCTTCAGATATGGAAAAGCTTAATGATCAACCATTTGCCCCTCTTTCCTCTGATGAAGTGCGAGAAATGAAGTCTGTACAAACTCCCTTCTCGCTCGACACAAAGACAATCGATGCTTCTGCCGCGAAAAATCTGATGCCACCGCCCATTGATCGTCACAAATCATTAGACGAGGAAGAATTCTCAACCGAAGCTATCGTCGTAAAAAAGAAAGCTCCTGCAATTCACTTAGATGTAAAATCATTTTCAGTGGCAGATCTGCAGATGGCTACAAACAGCTTCAGTGTAGATAACCTTCTCGGGGAGGGGTCATTTGGGCGTGTTTATCGAGCTCAATTTGATGGGAAGGTTCTTGCTGTGAAAAAAATTGATTCATACATTCTTCCCGAAGAATCAGCTGAAGATTTCTCTGAGATCGTGTCAAAAGTCTCACAGCTGCATCATCCCAACGTAACTGAGCTCGTGGGGTATTGCTCAGAGCATGGGCAGCATCTCCTTGTGTATGAATTCCACAAAAATGGCTCCTTGCATAACTTCCTGCATTTGCCTGATGAACACAGCAAAACACTGACATGGAGTTGCAGGGTAAACATCTCATTGGGCACCGCTCGGGCACTCGAGTATCTACATGAAGTTTGCTCTCCATCAATTGTTCATAGAAATATCAAGTCAACTAACATATTGCTAGACTCAGAGCTCAATCCACACATTTCGGACTCTGGCCTGGCTAGTTGCATGCCAAATATAGAGCAGGTGTTAGACCACAACAATGCCGAAGCGGGATATAGTGCCCCTGAGGTGACGATGTCTGGCCAATATACTCTAAAAAGTGACGTCTACAGTCTCGGAGTTGTCATGCTTGAACTGCTTAGCGGTCGTGAACCATTCGACAGTTCAAGGCCGAGAGCAGAGCAGTCTTTGGTTCGATGGGCAGCACCACAGCTCCATGACATTGATGCTTTGGGTAGAATGGTTGACCCGGCATTGAAAGGACTCTACTCTGTCAAATCTCTCTCCCGCTTTGCAGATGCCATTGCGCTTTGTGTCCAACCGGAGCCCGAGTTCAGACCACCAATGTCGGAAGTGGTGCAAGCACTAGTTTGGCTTGTGCAGCGAGCAAATATGAGCAAAAGGACAATTGGAAGAGGTTCTTTCCGGGGTGACAATCCAGAATCGGAAGAAAGATCTTAA 1809 45.05 MSYQLPPNLQRLNLARNKFNGNIPYSVTTMTSLKYLNVSYNQIQDLFDIFGQLSSLSTLDLSFNSFSGNLPEGCSSLSSMSTMYLQNNHFNGTINVLANLPLQHLNIENNHFTGWIPERLKNINLQKDGNSFSSGPAPPPPPYWPPSNQYNNADRNHNQSNQNQNQSDGGGKSGIGGGGIAGIVISLLLVGGIIAAFFLMKRRSRSSSDMEKLNDQPFAPLSSDEVREMKSVQTPFSLDTKTIDASAAKNLMPPPIDRHKSLDEEEFSTEAIVVKKKAPAIHLDVKSFSVADLQMATNSFSVDNLLGEGSFGRVYRAQFDGKVLAVKKIDSYILPEESAEDFSEIVSKVSQLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHNFLHLPDEHSKTLTWSCRVNISLGTARALEYLHEVCSPSIVHRNIKSTNILLDSELNPHISDSGLASCMPNIEQVLDHNNAEAGYSAPEVTMSGQYTLKSDVYSLGVVMLELLSGREPFDSSRPRAEQSLVRWAAPQLHDIDALGRMVDPALKGLYSVKSLSRFADAIALCVQPEPEFRPPMSEVVQALVWLVQRANMSKRTIGRGSFRGDNPESEERS 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 49512925 49517149 - Bma030140.2 Bma09g01001 89047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma09g01001 602 PANTHER OS01G0253100 PROTEIN 2 589 IPR045271 GO:0004714|GO:0006468
Bma09g01001 602 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 2 589 - -
Bma09g01001 602 Gene3D Ribonuclease Inhibitor 2 168 IPR032675 -
Bma09g01001 602 ProSiteProfiles Protein kinase domain profile. 300 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma09g01001 602 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Bma09g01001 602 ProSiteProfiles Leucine-rich repeat profile. 32 53 IPR001611 GO:0005515
Bma09g01001 602 MobiDBLite consensus disorder prediction 126 173 - -
Bma09g01001 602 Gene3D Phosphorylase Kinase; domain 1 260 376 - -
Bma09g01001 602 SUPERFAMILY L domain-like 7 122 - -
Bma09g01001 602 Pfam Protein tyrosine and serine/threonine kinase 302 572 IPR001245 GO:0004672|GO:0006468
Bma09g01001 602 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Bma09g01001 602 Gene3D Transferase(Phosphotransferase) domain 1 378 589 - -
Bma09g01001 602 MobiDBLite consensus disorder prediction 148 171 - -
Bma09g01001 602 Pfam Leucine rich repeat 7 65 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g01001 Bma13g01189 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g01001 Bma-Chr9:49512925 Bma10g00660 Bma-Chr10:9492498 0 dispersed
Bma04g01505 Bma-Chr4:51075316 Bma09g01001 Bma-Chr9:49512925 7.32E-11 transposed
Bma11g00016 Bma-Chr11:428358 Bma09g01001 Bma-Chr9:49512925 4.02E-61 transposed
Bma13g01189 Bma-Chr13:45177803 Bma09g01001 Bma-Chr9:49512925 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66712 PF07714 PK_Tyr_Ser-Thr 9.50E-41 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma09g01001 - - zju:107434403 808.135