Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00017 ATGGCTGCCGTAGTTCTTCCACCAACTTTAGAAGGCACTGCCCAGCAACCTCCCCTTTTTGATGGCACTACCAGATTGTATACTTCGTACGTATGCCCTTACGCACAACGTGTGTGGATCATCCGCAATTACAAGGGATTACAAGATGAAATCAAATTAGTTCCTCTAAACCTTCAAGACAGACCTGCCTGGTATAAGGAGAAAGTCTACCCTGTAAACAAGGTTCCAGCTTTGGAACACAATGGAAAGGTTATTGGAGAAAGTCTTGATTTGATTAAATATATCAATAGCAACTTCGAAGGGGTTTCTCTTTGGCCCGAAGATCCCGCTAAAGTAAAGTTCGCTGAAGAGTTGTTATCATACTCTGATACATTCAACATGGCAGTGTTTGGTTTACTAAAAACAGGCCCAGCTAATGGAACTGGTCAATTTGATTACTTGGAGGATGCTTTGGGTAAATTTGATGATGGGCCATTCTTCCTTGGAGAAATCAGTTTGGTGGATATTGCCTACATACCCTTTGTTGAAAGGTTCAAAATTTATTTAGCAGAGGTTTGGAAGCACGATATAACCGAGGGAAGGCCTAAACTAGCTTTATGGATTGAGGCAATGGACAAGATCGATGCATATGCGCAAACAAAATGCGATCCCAAAGATTTTCTTGAAGCATACAAGAAGCGTTTGTCGGCTCAGTAG 696 41.81 MAAVVLPPTLEGTAQQPPLFDGTTRLYTSYVCPYAQRVWIIRNYKGLQDEIKLVPLNLQDRPAWYKEKVYPVNKVPALEHNGKVIGESLDLIKYINSNFEGVSLWPEDPAKVKFAEELLSYSDTFNMAVFGLLKTGPANGTGQFDYLEDALGKFDDGPFFLGEISLVDIAYIPFVERFKIYLAEVWKHDITEGRPKLALWIEAMDKIDAYAQTKCDPKDFLEAYKKRLSAQ 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 282462 284215 + Bma003640.1 Bma10g00017 89080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00017 231 SUPERFAMILY Thioredoxin-like 16 103 IPR036249 -
Bma10g00017 231 CDD GST_C_Lambda 108 225 - -
Bma10g00017 231 SFLD Main (cytGST) 25 205 - -
Bma10g00017 231 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 229 IPR044629 GO:0004364
Bma10g00017 231 Pfam Glutathione S-transferase, C-terminal domain 144 203 - -
Bma10g00017 231 SFLD Glutathione Transferase (cytosolic) 25 205 IPR040079 -
Bma10g00017 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 22 103 IPR004045 -
Bma10g00017 231 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 4 229 - -
Bma10g00017 231 Gene3D - 101 231 - -
Bma10g00017 231 SUPERFAMILY GST C-terminal domain-like 101 228 IPR036282 -
Bma10g00017 231 Gene3D Glutaredoxin 1 100 - -
Bma10g00017 231 Pfam Glutathione S-transferase, N-terminal domain 26 101 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00017 Bma-Chr10:282462 Bma13g00910 Bma-Chr13:39481538 7.30E-09 dispersed
Bma10g00017 Bma-Chr10:282462 Bma06g00175 Bma-Chr6:2208313 2.03E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00017 K00799 - pvy:116127701 345.895