Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00022 ATGGACGTTGAATTCAAAGATATTAACGGAAATCACGTCGGATTGGATCTGAACAGTATGGTTTCGATTCAGGCTAGTGAACTGGAAACGATCGGAGTTGATTTAAAAAGCGGCGATTTGGTTAACTCGTGGATAGAGTACGACGGGTTGACGCGGGTTTTCAACGTATCGGTTTCGTATTCAAATCTGAAACCAAAAGATCCGATTTTGTCACTCCCTCTCGATCTGGATCAGTTCGTCAACGATTTCATGTTCGTTGGATTCTCCGGGTCCACCCAGGGTAGCACAGAAACTCACAGCATCGAGTGGTGGAGCTTCACCTCCTCTTTCGACTCGAATTCTCCGGTCGGATCAGTAACTCCGCCTCCTCCAATGGCGACTCTGATGAACCCGACGGCGAACTCCGTCACGTCCGCTCCTCCTTCATTTCCTCCATCTGGTTCAGATTCAGTTTCACAAAAAAATGGCAAGTCTTCCTCTTGCAATAATGAGTTCTGTAAACAAGGCCCCGGCGCCGTTGTCGGAGTGGTGACGGCTGGAGCTTTCGTTTTAGCTCTCTTTGCCGGAGCTCTGATTTGGGTGCACTCTAAAAAGTTGAAGCACGTAGAAAAAACTGATTCTTTTCCAGAGATCATCAAAATGCCGAAAGAATTCAGCTACAAAGAGCTCAAAACCGCCACGAAATGCTTTCATACAAATAGAGTCATCGGCCACGGGGCATTCGGGACGGTTTACAAAGGAATTCTGCCGGAAACCGGCGACATTGTCGCCGTAAAAAGGTGTAGTCATAATAGTCAGGGGAAGAAAGAATTTATGTCTGAGCTATCGATAATAGGAACTCTAAGACATCGAAATTTAGTTCGACTTCAAGGGTGGTGCCACGAGAAAGGCGAAATTCTTTTAGTATATGATCTAATGCCGAATGGAAGCCTCGATAAAGCGTTATTCGAATCAAGAACTCCTCTCCCATGGCCGCACAGAAAGAAAATTTTACTAGGCGTTGCTTCTGCTCTAGCATATCTCCATCAAGAATGCGAAAACCAGGTGATTCACAGAGATGTGAAAACCAGTAACATCATGTTAGACGAAGGCTTCAACGCCCGGTTAGGAGATTTCGGCTTGGCGAGACAGATTGAGCACGATAAGTCGCCGGAGGCAACCGTTGCCGCGGGAACAATGGGGTACTTAGCGCCGGAATATCTTTTAACAGGGCGAGCTACCGACAAAACCGACGTTTTCAGCTATGGAACGGTGGTTCTGGAAGTGGCTAGTGGAAGAAGACCCATTGAAAAGGAAGTAAGTGGGGCAGGGAAAGTGGGAATGAGTAGCAACTTGGTGGAATGGATTTGGAGCATGCACAGAGAAGGGAGGTTGTTAATGGCTGCGGACGCGAGACTAGAGCGCGAGTTTGAGGAAGGAGAGATGAGGAGAGTACTGTTGATTGGGTTAGCTTGTTCGCACCCTGACCCGATGGCTCGACCGGCAATGAGAGGTGTGGTTCAGATGCTGGCCGGCGAAGCTGAAATTCCATTAGTGCCTAGAACCACCAAGCCTTGTACCAGTTTCAGCACAGCTCACCTTCTCCAGAGTTTGCAGGATAGCGTGTCTGATCTGAATGGTGTGATCGCCATTTCCAGCTCCTCCTCCTCAGAACGCAGCTTCAACGGCGGGGATTTAGTCTAA 1683 48.19 MDVEFKDINGNHVGLDLNSMVSIQASELETIGVDLKSGDLVNSWIEYDGLTRVFNVSVSYSNLKPKDPILSLPLDLDQFVNDFMFVGFSGSTQGSTETHSIEWWSFTSSFDSNSPVGSVTPPPPMATLMNPTANSVTSAPPSFPPSGSDSVSQKNGKSSSCNNEFCKQGPGAVVGVVTAGAFVLALFAGALIWVHSKKLKHVEKTDSFPEIIKMPKEFSYKELKTATKCFHTNRVIGHGAFGTVYKGILPETGDIVAVKRCSHNSQGKKEFMSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFESRTPLPWPHRKKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRATDKTDVFSYGTVVLEVASGRRPIEKEVSGAGKVGMSSNLVEWIWSMHREGRLLMAADARLEREFEEGEMRRVLLIGLACSHPDPMARPAMRGVVQMLAGEAEIPLVPRTTKPCTSFSTAHLLQSLQDSVSDLNGVIAISSSSSSERSFNGGDLV 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 329164 330846 - Bma003644.1 Bma10g00022 89085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00022 560 Pfam Protein kinase domain 230 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00022 560 SMART serkin_6 230 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00022 560 MobiDBLite consensus disorder prediction 129 160 - -
Bma10g00022 560 CDD STKc_IRAK 236 503 - -
Bma10g00022 560 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Bma10g00022 560 MobiDBLite consensus disorder prediction 112 160 - -
Bma10g00022 560 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 252 IPR013320 -
Bma10g00022 560 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 1 553 - -
Bma10g00022 560 Gene3D Phosphorylase Kinase; domain 1 192 305 - -
Bma10g00022 560 SUPERFAMILY Protein kinase-like (PK-like) 212 531 IPR011009 -
Bma10g00022 560 PANTHER - 1 553 - -
Bma10g00022 560 Gene3D - 1 159 - -
Bma10g00022 560 Pfam Legume lectin domain 4 113 IPR001220 GO:0030246
Bma10g00022 560 ProSiteProfiles Protein kinase domain profile. 230 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00022 560 Gene3D Transferase(Phosphotransferase) domain 1 306 509 - -
Bma10g00022 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Bma10g00022 560 CDD lectin_legume_LecRK_Arcelin_ConA 1 110 IPR001220 GO:0030246
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00022 Bma-Chr10:329164 Bma10g00593 Bma-Chr10:7271495 1.03E-179 dispersed
Bma10g00022 Bma-Chr10:329164 Bma04g01639 Bma-Chr4:52305099 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66714 PF00069 Pkinase 1.00E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00022 - - bhj:120091585 894.034