Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00057 ATGATAAGCGTTCCCATGTCTCTCAACGCTATCGTACGCCTCAACGTCCCCGATGCCATTTGGAACGGCGGCTCCAACGCTCCGCTCTCAGCCGAACAGATCCTGACCAACATCCTGCCCTCCGGCGGCGACGCCGAGAATCTCCAACGTCTCCTCCGCATCCTTACCACCTACGGCGTTTTCACTGAGCACCTAAACCCGAACTCCTCCGACGGCCGAAAGTACTCCCTCACTGAAATTGGGAAAACACTCGTCACCAATTCCGACGGCCTCTCCTACGCCCCCTACGTTCTCCAGCACCACCAGGATGAGCTAATCAGATCGTGGCCATTGTTGCACGAGGCAATAACAGATCCAACAAGAGAACCGTTTGCAAAGGCGAATGGGGAGCCAGCCTACTCTTTCTACGGGAAGAAGCCGGAAATGAATGAATTGATGCAGAAGGCTATGTCCGGCACATCAGTGCCGTTCATGAACGCGATACTGGACGGGTACGACGGATTTAACGGCGTGGAGAGAATCGTCGACGTAGGGGGGAGCGCCGGAGATTGTCTGAAAATGATCTTACACAAACATCCACACGTAAAGGAAGGGATAAACTTCGACTTGCCGGAGGTGGTAGCGAAGGCACCAATCATTCCTGGAGTGACTCACGTTGGTGGTGACATGTTCAAATCTATTCCCAAAGGGGACGCCATCTTCATGAAGTGGATTTTATCGACGTGGACGGATGATGAGTGCAAGGAGTTGATGGAGAACTGCCACAAGGCACTACCGGCGGGAGGAAAATTGATAGCGTGCGAGCCGGTGTTGCCGAGGGAGTCGGACGAGAGCATGAGGACTCGAGCTCTGTTGGAAAGCGATGTGTTTGTTATGGCGACGTACAGAGCCAAAGGTAAGAATAGAACCCGACAAGAGTTCGAGCAGCTTGGCCTCTCTGCTGGTTTCCCAACTTTCCGGGTGTTCGACATTGATTACTTCTATTCAGTCATGGAATTCCAAAAGTGA 1008 52.78 MISVPMSLNAIVRLNVPDAIWNGGSNAPLSAEQILTNILPSGGDAENLQRLLRILTTYGVFTEHLNPNSSDGRKYSLTEIGKTLVTNSDGLSYAPYVLQHHQDELIRSWPLLHEAITDPTREPFAKANGEPAYSFYGKKPEMNELMQKAMSGTSVPFMNAILDGYDGFNGVERIVDVGGSAGDCLKMILHKHPHVKEGINFDLPEVVAKAPIIPGVTHVGGDMFKSIPKGDAIFMKWILSTWTDDECKELMENCHKALPAGGKLIACEPVLPRESDESMRTRALLESDVFVMATYRAKGKNRTRQEFEQLGLSAGFPTFRVFDIDYFYSVMEFQK 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 569953 571276 - Bma003676.1 Bma10g00057 89120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00057 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 333 IPR029063 -
Bma10g00057 335 PIRSF O-mtase 1 335 IPR016461 GO:0008168
Bma10g00057 335 PANTHER O-METHYLTRANSFERASE 1 334 IPR016461 GO:0008168
Bma10g00057 335 SUPERFAMILY Winged helix DNA-binding domain 2 87 IPR036390 -
Bma10g00057 335 Pfam Dimerisation domain 6 56 IPR012967 GO:0046983
Bma10g00057 335 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 335 IPR016461 GO:0008168
Bma10g00057 335 Gene3D - 1 89 IPR036388 -
Bma10g00057 335 Pfam O-methyltransferase domain 109 316 IPR001077 GO:0008171
Bma10g00057 335 PANTHER OS02G0823400 PROTEIN 1 334 - -
Bma10g00057 335 Gene3D Vaccinia Virus protein VP39 90 335 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00057 Bma-Chr10:569953 Bma13g01152 Bma-Chr13:44719176 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00057 - - gra:105767857 545.428