Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00060 TTCAGGGGATCCCAGGAGGAGCCGTCACAGCATCGTCCACCGGAAGTGACCACACAATCATGGTATCCTCCATCAGTTGCTGGTTATTCCAATGCCTCCCGGCCCGCAACACCAAGTGGCACATCCCCTGGAAACTTTAGTTCACAAAAGACTTCAGATAGACCACAGTCTCCTTCGCATGTTTCGCCTGCGGAAGCTGCTGGTATTATATCTGCCTTAAAAGACAAAAGTGTTGATGAGTTACGGAAACTTTTACACGACAAGGATGCCTACCTTCAATTTCTGCTTTCACTCGATCAGGTCAAAACTCAAACCAATGTGAAAGAGGAATTGCGGAAGGAAACTCTTCTACTTGCCAGAGAAAACTTGGAAAAAGAACCACGCATATTAGAGCTCAGAAATCAGTGCAAAATTATCCGGACAAGTGAATTAGCTTCTGCTCTGGAGAAAGTAAATGAACTGCAGAGGCAGAAAGACGAGATTTTGAAGTTCTATTCTCCTGCATCTCTTCTTCGAAGGCTTCAAGATTTTCCCATCATAAATTTTTATTTGATTGAGCTTCTTATTGGGGAGTTATTTTCTACCTTTTGGTTTGCAGAGTCAATGAATCAGACAGAAGAAGAGTCGGAGAATATGCATCAACAACTTCTTGATAAAGAAATCGACCTTGCTACATTTGTGCAGAAATACAAGAAGCTGCGTGTAGATTACCACAAGCGAGCACTTATCCTTTTGGCTGCTAAAACGTCTTCTGAGAATTGA 762 42.65 FRGSQEEPSQHRPPEVTTQSWYPPSVAGYSNASRPATPSGTSPGNFSSQKTSDRPQSPSHVSPAEAAGIISALKDKSVDELRKLLHDKDAYLQFLLSLDQVKTQTNVKEELRKETLLLARENLEKEPRILELRNQCKIIRTSELASALEKVNELQRQKDEILKFYSPASLLRRLQDFPIINFYLIELLIGELFSTFWFAESMNQTEEESENMHQQLLDKEIDLATFVQKYKKLRVDYHKRALILLAAKTSSEN 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 592505 594369 + Bma003679.2 Bma10g00060 89123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00060 253 Pfam Modifier of rudimentary (Mod(r)) protein 74 175 IPR009851 -
Bma10g00060 253 Pfam Modifier of rudimentary (Mod(r)) protein 199 243 IPR009851 -
Bma10g00060 253 Coils Coil 202 222 - -
Bma10g00060 253 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 200 251 - -
Bma10g00060 253 Coils Coil 106 126 - -
Bma10g00060 253 MobiDBLite consensus disorder prediction 10 59 - -
Bma10g00060 253 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 3 176 - -
Bma10g00060 253 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 200 251 - -
Bma10g00060 253 MobiDBLite consensus disorder prediction 1 64 - -
Bma10g00060 253 Gene3D Helix hairpin bin 197 249 IPR029012 -
Bma10g00060 253 ProSiteProfiles VPS37 C-terminal domain profile. 148 253 IPR009851 -
Bma10g00060 253 SUPERFAMILY Endosomal sorting complex assembly domain 198 240 IPR037202 -
Bma10g00060 253 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 3 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00060 K12185 - qlo:115952267 322.398