Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00063 ATGGCGACCTTACTTTCCCTGTTATCGGCTTTAGCATCCGTTCTTGTGCTGGTGTCGGTGGTGTACTGTGGTTTCTCGCCAGCTCTTCTCCATCTGGAGAGAGCTTTTCCGCTCGGTCTACCTGTGGAGCTCGATGGTCTCAGAGCTCGAGACAGAGTTAGGCATGCACGAATCTTGCAAGGTGTGTTCGGTGGTGTTGTCGACTTCTCAGTCGAAGGTTCTCCCGATCCATACCTCGTTGGGCTTTATTTTACCAAAGTGAAGTTAGGTTCTCCTCCGAGGGAATTCACTGTACAAATAGATTCGGGGAGTGACATATTATGGATTACTTGTAGTTCATGCAATGATTGTCCCCAATCAAGTGAACTTGGGATTCAACTAAATTATTTCGATGTGGCCAGCTCATTAACTGCTGGACTGATCCCCTGCTCAGACACCATCTGCACTTCTCAATTTCAAACAACAGCAACTCAATGCTCTACCCAGAGTAATCAGTGCGGTTACACCTTCCAGTATGGTGATGGAAGTGGCACATCTGGTTTTTATGTATCCGATTCCTTGTACTTTGACATGGTTCTGGGGCAATCTATGATTGCCAACTCCTCAGCCACGATTGTCTTTGGGTGTAGCACATTTCAGTCTGGAGATTTGACTAAAACAGACAAAGCAATCGATGGTATTTTTGGTTTTGGTCCAGGGGATTTGTCTGTTATATCACAATTGTCATCTCAAGGAGTAACACCGAAGGTTTTCTCCCATTGTTTGAAAGGAGACGACCATGGAGGTGGAATATTGGTTCTTGGTGAGATTCTGGAGCCCAGTATTGTTTACAGTCCACTTGTTCCATCCCAGCCTCATTATAATTTATATCTTCAGAGCATTGCTGTTAATGGGCAACTGTTATCAATTGATCCATCAGTTTTTGCAACATCAATCAATCGAGGAACTATTGTAGACACTGGAACAACACTCTCATATCTTGTCGAAGAAGCTTATGATCCGTTTGTCAGTACTATAACTTCTGCGGTTTCTCAATCGGTGTCTTTGATTATCTCGAAGGGGAACCAGTGTTATCTTGTCTCCACCAGTGTTGCCGAGATATTTCCTCTGGTGAGCTTAAACTTTGCTGGCGGAGTATCGATGATTTTGAAACCAGAAGATTATCTTATACATCTTGGGTTTTATGAGGGAGCTGCAATGTGGTGTATTGGGTTTCAGAAAGCTCAAGAAGGGATCACCATCTTAGGAGATCTTGTTCTGAAAGATAAAATCTTTGTTTACGATTTAGATCGCCGACGAATAGGGTGGGCAAACTACGATTGTAAGTCGATTAACTAA 1338 43.5 MATLLSLLSALASVLVLVSVVYCGFSPALLHLERAFPLGLPVELDGLRARDRVRHARILQGVFGGVVDFSVEGSPDPYLVGLYFTKVKLGSPPREFTVQIDSGSDILWITCSSCNDCPQSSELGIQLNYFDVASSLTAGLIPCSDTICTSQFQTTATQCSTQSNQCGYTFQYGDGSGTSGFYVSDSLYFDMVLGQSMIANSSATIVFGCSTFQSGDLTKTDKAIDGIFGFGPGDLSVISQLSSQGVTPKVFSHCLKGDDHGGGILVLGEILEPSIVYSPLVPSQPHYNLYLQSIAVNGQLLSIDPSVFATSINRGTIVDTGTTLSYLVEEAYDPFVSTITSAVSQSVSLIISKGNQCYLVSTSVAEIFPLVSLNFAGGVSMILKPEDYLIHLGFYEGAAMWCIGFQKAQEGITILGDLVLKDKIFVYDLDRRRIGWANYDCKSIN 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 601870 604827 + Bma003682.1 Bma10g00063 89126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00063 445 Gene3D Acid Proteases 68 269 IPR021109 -
Bma10g00063 445 Gene3D Acid Proteases 270 445 IPR021109 -
Bma10g00063 445 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Bma10g00063 445 CDD pepsin_A_like_plant 83 441 IPR034161 -
Bma10g00063 445 PANTHER ASPARTYL PROTEASES 5 443 IPR001461 GO:0004190|GO:0006508
Bma10g00063 445 SUPERFAMILY Acid proteases 78 441 IPR021109 -
Bma10g00063 445 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Bma10g00063 445 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Bma10g00063 445 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Bma10g00063 445 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Bma10g00063 445 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 443 - -
Bma10g00063 445 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01975 Bma10g00063 CCT
Bma01g01975 Bma10g00063 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00063 Bma-Chr10:601870 Bma14g01190 Bma-Chr14:17660432 3.55E-104 dispersed
Bma01g01748 Bma-Chr1:56339710 Bma10g00063 Bma-Chr10:601870 7.79E-07 transposed
Bma01g01975 Bma-Chr1:73575405 Bma10g00063 Bma-Chr10:601870 0 transposed
Bma06g00364 Bma-Chr6:9076340 Bma10g00063 Bma-Chr10:601870 1.42E-43 transposed
Bma07g00014 Bma-Chr7:1143427 Bma10g00063 Bma-Chr10:601870 1.36E-06 transposed
Bma08g00643 Bma-Chr8:40562543 Bma10g00063 Bma-Chr10:601870 8.40E-06 transposed
Bma10g00063 Bma-Chr10:601870 Bma11g00207 Bma-Chr11:1820373 2.48E-42 wgd
Bma10g00063 Bma-Chr10:601870 Bma14g00428 Bma-Chr14:5000246 1.17E-09 wgd
Bma10g00063 Bma-Chr10:601870 Bma07g00175 Bma-Chr7:2298230 2.76E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00063 - - jre:109008469 692.96