Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00069 ATGGCTTCCTGTGACGACGACTTCTCTCTCCTCAGCGATGAACAGCACCACCAGCACCACCAGCCCAATCCCAATCACCACCATGTCCCTTCATCTCATCACCTCCACCAGACCTACGCTAATCACCGGTTTGGTTCCCGACCCGCTCCGGTCCACACTCCTCCGCCGCCGTCCCAGCCGATTCTCGCGCATTCAGAGAGTCCGAAGAAGATCGGCGCCGGAGAAGAGGAAGAGGAGGACGGAGACGATTACGGCGAGGCGGCCTTTTGTTCGAATCCGTTTGATAATGGTACTGATCAGAGTAGAGTCGGGATCGGCGTTGATATGCGTGTAGAGAAAAGGAAGGATCTTGTGGAGGATCTCGGCGATGAAAGTGCTTCGTACGGTTACAAGAAACCTAGATCCTCCGTCATCGTTGGCGGTGAGTATAGGAAAGATAGGGAGGAGTGGAGCGACGCGGCGATATCTTGCCTTCTTGATGCGTATACAGAGAAGTTTACGCAGCTGAACAAGGGGAATCTGAGAGGGAGGGATTGGGAGGAGGTAGCGGCGACTGTGAGCGAACGGTGTGAGAAGCAGAGTAAGAGTGTCGAGCAGTGTAAGAACAAGGTAGACAACTTGAAGAAGAGGTATAAGTTGGAAAGGCATAGAATGAGTAATGGTGGCATTTCCGCCAGTCACTGGCCTTGGTTCAAGCAAATGGAGCAAATTGTTGGTAATTCCATGACAATGAAGATTTCGTCCGACGAAGATCGGAGTATGAGTTCATCTGGGAATACTCCGAGGCAATCGAAGAGATACACGGTGATGACTCCAACTACTTCTGGACCAATAAATAATTTGAAACCCAAAACTGCATCTAGTCCACGATGGCGAAGAGTGGTGTTTAAAATCAGCGGTGCAGCTCTGGCTGGGACGGGTCCTAATAATATTGACTCAAAGGTGGCAATGCTGATTGCTAGAGAAGTTATGATGGCTTGCCGCCTTGGTGTCGAGGTTGCAATTGTTGTTGGAGGTCGAAACTTCTTTTGTGGAGACACATGGGTGACTGCAACAGGTTTAGATAGATGCACTGCATACCAAATTGGTATGATGGCCACTGTTATGAATTCTATTCTTATACAATCAGCACTAGAGAAGATGGGAGTTCAGACTCGCATCCAATCCGCATTTACCCTGCAAGAGATTGTGGAACCATACAGTAGACAACGAGCTATTCGACATCTTGAAAAAGGCAGAGTTGTTATATTTGGTGGCATTGGTGCTGGTTCTGGAAATCCCCTCTTCTCCACTGATACAGCTGCAGCTCTTCGAGCATCAGAGATTCAAGCTGAGGCTGTCCTCAAGGGTACCAATGTGGATGGTGTGTATGACTGCAATTCCCAAGACAACAATTTTACATTCAAGCACATCTCCTTCAGGGAGTTGGTCTCTAGAGGTGCAACCTCCATGGACATGACATCTCTGACGTTCTGTGAAGAGAACAACATTCCGGTTGTTGTCTTTAATCTTCTTGAACCTGGAAACATTTCGAAAGCTTTATGTGGGGATCAGGTTGGCACGCTGATTGATCAAACTGGAAGAGTTAGCTAA 1593 48.34 MASCDDDFSLLSDEQHHQHHQPNPNHHHVPSSHHLHQTYANHRFGSRPAPVHTPPPPSQPILAHSESPKKIGAGEEEEEDGDDYGEAAFCSNPFDNGTDQSRVGIGVDMRVEKRKDLVEDLGDESASYGYKKPRSSVIVGGEYRKDREEWSDAAISCLLDAYTEKFTQLNKGNLRGRDWEEVAATVSERCEKQSKSVEQCKNKVDNLKKRYKLERHRMSNGGISASHWPWFKQMEQIVGNSMTMKISSDEDRSMSSSGNTPRQSKRYTVMTPTTSGPINNLKPKTASSPRWRRVVFKISGAALAGTGPNNIDSKVAMLIAREVMMACRLGVEVAIVVGGRNFFCGDTWVTATGLDRCTAYQIGMMATVMNSILIQSALEKMGVQTRIQSAFTLQEIVEPYSRQRAIRHLEKGRVVIFGGIGAGSGNPLFSTDTAAALRASEIQAEAVLKGTNVDGVYDCNSQDNNFTFKHISFRELVSRGATSMDMTSLTFCEENNIPVVVFNLLEPGNISKALCGDQVGTLIDQTGRVS 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 655931 658757 + Bma003688.1 Bma10g00069 89132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00069 530 Hamap Uridylate kinase [pyrH]. 289 524 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bma10g00069 530 Pfam Myb/SANT-like DNA-binding domain 147 237 IPR044822 -
Bma10g00069 530 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 1 530 IPR011817 GO:0006221|GO:0009041
Bma10g00069 530 Pfam Amino acid kinase family 293 503 IPR001048 -
Bma10g00069 530 MobiDBLite consensus disorder prediction 247 286 - -
Bma10g00069 530 Coils Coil 190 217 - -
Bma10g00069 530 Gene3D - 282 529 IPR036393 -
Bma10g00069 530 MobiDBLite consensus disorder prediction 1 105 - -
Bma10g00069 530 CDD AAK_UMPK-PyrH-Ec 292 524 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bma10g00069 530 SUPERFAMILY Carbamate kinase-like 290 523 IPR036393 -
Bma10g00069 530 PANTHER URIDYLATE KINASE 1 530 - -
Bma10g00069 530 Gene3D - 150 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00424 Bma-Chr3:3226832 Bma10g00069 Bma-Chr10:655931 8.96E-17 dispersed
Bma06g00506 Bma-Chr6:25505441 Bma10g00069 Bma-Chr10:655931 1.54E-62 dispersed
Bma06g00514 Bma-Chr6:26841851 Bma10g00069 Bma-Chr10:655931 1.69E-91 dispersed
Bma09g00548 Bma-Chr9:42438554 Bma10g00069 Bma-Chr10:655931 4.81E-14 dispersed
Bma09g00557 Bma-Chr9:42576433 Bma10g00069 Bma-Chr10:655931 1.10E-12 dispersed
Bma10g00069 Bma-Chr10:655931 Bma14g00998 Bma-Chr14:11632227 1.51E-16 dispersed
Bma15g00381 Bma-Chr15:4243018 Bma10g00069 Bma-Chr10:655931 4.94E-14 dispersed
Bma10g00069 Bma-Chr10:655931 Bma08g00870 Bma-Chr8:46859286 1.09E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57893 PF00696 AA_kinase 1.30E-24 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00069 - - csv:101222460 853.588