Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00070 ATGAAGGTGAAGGAGACGAAAAGTTTTTCTCTTTCTCTCTCCTCCATACCAACTGTAGTCTTCTTCTTCTTTTTCTTCTTCCTCCTCCTCTGTTACACGGCTTCTTCTACCTTGTCGCCTCCCAATGACACTTCTGTACTCACCCAATTCCGTGTCGGCGCTGATTCCCACGGAAATCTTCTCCCCAACTGGACCGGCTCCGATGCATGCGCCGCTGCATGGCTGGGAGTTCAATGCTCGTCTGCCGGCCGCGTTATCGCTCTCTCACTACCGTCGATCAACCTCCGGGGCCCAGTTCTGAATCTGGCTAAGCTTGACCAGCTTCGCCTTCTCGACCTCCATGATAACCGCCTGAACGGAACCGTTTTGCCCCTCATGAACTGCACCCAACTCAAGCTTCTGTATCTTGCTGGCAATGACTTCTCCGGCGAGATTCCACCGGAGATTTCCTCACTCAGGCACATCATCCGACTTGATCTCTCCGATAACAACATACGAGGCGTGATTCCGAACGAGGTCTCGCGATTGACTCGACTCCTCACGCTTCGGCTTGATAATAACATGATTTCCGGTACAGTTCCAGATCTTTCCTCTTCACTCGTCAATCTAACAGAATTGAATTTGACGAACAATGATCTGTCCGGAAGATTGCCGGATAATTTGCTCAGAAAATTCGGCCCAAAAAGCTTTTCAGGAAACGAAGGTCTATGCGGATCAACACCGTTGGGTGCTTGTTCCTTCACCGGAACTTCACCGGAGATAGCTTCTTCGCAAACGGTACCGTCAAATCCTAGCTCAATCCCTAAAACTCCAATTCTAACCGAAGATGATAAAAAATCGCACAAATCCCTTAGCACTGGCGCTATAGTGGCAATCGCAATCGCCAATTCCGTTGCATTGCTGGTAATCATCTCCTTCGTCGTCGCCCACTACTGCGCCAGATATCAAAGCTCGCCGTCAATGGCGGGAAGCGAAATCAGAAAGGGAAGAAGGAGCGGAAGCAGCTACGGAAGCGAGAAGAAAGTATACGCAAATGGAGGAGGAGACAGCGACGCGACGAACGCCACAGATCGAAGCAAGCTCGTGTTCTTCGACAGGAAGAAGCAGTTCGAGCTGGAGGATTTGCTGCGGGCGTCTGCGGAGATGCTGGGGAAAGGCAGTCTAGGGACGGTGTACAGAGCGGTGTTGGATGACGGTTGCACGGTGGCGGTGAAGAGGTTGAAGGACGCGAATCCATGCGCGAGGAAGGAGTTCGAACAGTACATGGATTTAATAGGGAGGCTGAAATACCCAAATGTAGTAAAGCTCAGAGCTTACTATTATGCGAGGGAGGAGAAGCTTCTGGTTTATGATTATCTTCCTAATGGAAGCTTGCATTATCTTCTTCACGGGAATAGGGGACCAGGAAGAATCCCACTGGATTGGACCACCAGAATCAGCTTGGTGCTGGGAGCAGCTCGAGGGCTTGCCAGGATTCACGCAGAGTACAGCGAAACGAGAATCCCCCATGGCAACGTCAAGTCTTCCAATGTTCTTCTCGACAAAAACGGGCTCGCATGCATTTCGGATTTCGGGTTGTCTCTCCTTCTAAACCCGGTTCACGCCATTGCAAGATTGGGAGGATACAAAGCTCCAGAACAAGCGGAGACGAAGAAGTTGTCTCAGCAGGCAGACGTATACAGCTTTGGAGTCTTGTTGCTCGAAACACTCACCGGTCGAGCTCCGTTACAGTATCCTTCACATACCAGGGCTAGAACGGAGGAGGAAGAAGACGGAGGAGAAGAAGATCTTCCAAAATGGGTGCGATCTGTGGTGAAAGAAGAGTGGACCGCCGAAGTGTTTGATCCGGAGCTTTTGAGGTACAAAAACATTGAAGAGGAGCTTGTCTCCATGCTTCACGTTGGGCTAGCCTGCGTTGTATGGCCACCGGAAAAGAGGCCATCAATGGCTGAAGTTGCAAAGATGATCGAGGATATCAGAGTTGAACAGTCTCCGCTAGGAGAAGACTACGACGAGTCCAGAAATTCACTTTCGCCCTCTTTGGCCACCACTGAAGATTGA 2061 50.51 MKVKETKSFSLSLSSIPTVVFFFFFFFLLLCYTASSTLSPPNDTSVLTQFRVGADSHGNLLPNWTGSDACAAAWLGVQCSSAGRVIALSLPSINLRGPVLNLAKLDQLRLLDLHDNRLNGTVLPLMNCTQLKLLYLAGNDFSGEIPPEISSLRHIIRLDLSDNNIRGVIPNEVSRLTRLLTLRLDNNMISGTVPDLSSSLVNLTELNLTNNDLSGRLPDNLLRKFGPKSFSGNEGLCGSTPLGACSFTGTSPEIASSQTVPSNPSSIPKTPILTEDDKKSHKSLSTGAIVAIAIANSVALLVIISFVVAHYCARYQSSPSMAGSEIRKGRRSGSSYGSEKKVYANGGGDSDATNATDRSKLVFFDRKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARKEFEQYMDLIGRLKYPNVVKLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSETRIPHGNVKSSNVLLDKNGLACISDFGLSLLLNPVHAIARLGGYKAPEQAETKKLSQQADVYSFGVLLLETLTGRAPLQYPSHTRARTEEEEDGGEEDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVVWPPEKRPSMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTED 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 659422 661563 - Bma030327 Bma10g00070 89133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00070 686 MobiDBLite consensus disorder prediction 322 351 - -
Bma10g00070 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 28 678 - -
Bma10g00070 686 MobiDBLite consensus disorder prediction 663 686 - -
Bma10g00070 686 Pfam Leucine rich repeat 157 213 IPR001611 GO:0005515
Bma10g00070 686 SUPERFAMILY Protein kinase-like (PK-like) 381 656 IPR011009 -
Bma10g00070 686 Gene3D Phosphorylase Kinase; domain 1 348 452 - -
Bma10g00070 686 SUPERFAMILY L domain-like 41 230 - -
Bma10g00070 686 Gene3D Ribonuclease Inhibitor 123 247 IPR032675 -
Bma10g00070 686 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Bma10g00070 686 Gene3D Ribonuclease Inhibitor 39 120 IPR032675 -
Bma10g00070 686 MobiDBLite consensus disorder prediction 253 278 - -
Bma10g00070 686 ProSiteProfiles Protein kinase domain profile. 377 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00070 686 Gene3D Transferase(Phosphotransferase) domain 1 453 677 - -
Bma10g00070 686 MobiDBLite consensus disorder prediction 253 270 - -
Bma10g00070 686 PANTHER LRR RECEPTOR-LIKE KINASE 28 678 - -
Bma10g00070 686 Pfam Protein kinase domain 381 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma10g00070 686 MobiDBLite consensus disorder prediction 670 686 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00070 Bma-Chr10:659422 Bma12g01282 Bma-Chr12:45808296 1.80E-149 dispersed
Bma14g01908 Bma-Chr14:40794714 Bma10g00070 Bma-Chr10:659422 3.14E-75 dispersed
Bma10g00070 Bma-Chr10:659422 Bma06g01049 Bma-Chr6:47314103 2.91E-150 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66716 PF00069 Pkinase 8.60E-31 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00070 - - bhj:120091526 996.497