Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma10g00129 | ATGGCGACGTACTTTCAGGGTAATTCAGAAATCCAAGCTCCAGATGGATTACAGACGCTAGTACTTATGAATCCTGGAGACGTACAGTTCTCCGATTCCCTTCCGCCGCCTCCGACCAACATCGGATTCTTCAGTTCTGGCGCCGGAAATTCTTTAACTTCTCAGAATCTTCACCACGCGCCACCATCCCAATGCCCGCAATTCGCCGGGATTCCTTTGCCGGTTTCTCTTTCCCCTACTTCAAAAGAACCTAGTTCTCATCCCACACATCCCCACCATTTGTCCGCCTCGCATGGACTCATCCCCCAAGCCAAATTCAATCACTGGAATCCGATCAACTCCCCAGGCGCGCGTCAATCTCAACGCACTACACAAGGCCTTTCCCTCAGCCTCTCCTCTCAGCAGCCCGGTTATGGGTCTCAACGAACCGGACGAGAAACCTCATCCCCAGCTCAGCACGCAGTTTCCGGCGAGAGAATTCGGATTGCCGGTGCGTCATCGGTTTCCGGTAATACCAACGACGTTTCAGGTGTACATGGTGTGTTGCTGAGCTCAAAGTACTTGAAAGCGGCCCAAGATCTCCTCGAAGAAGTCGTAAATCTAGACATCGATGAAACTAAGAATGAATCACCGAGAAAACCTAACGGCACTAAGCTCACCGAAGAGCCATCTATGACGGCAACCGAAAATGGCTCAGACGGAGCAGAAGAAGCTCGGAAAGACAGTCCACAGCTTTCAACAGCCGAGAGACAGGACATTCAGAGAAAGAAGACAAAGTTTATCAGTATGCTTGATGAGGTGGAGCAAAGGTACAAACAATACCATCATCAGATGCTGATCGTGATATCGTCGTTCGAACAAGCGACTGGAATGGGATCGGCAAGATCGTACACATCCCTCGCTCTCAGAACAATTTCGAAGCAATTCCGGTGCTTGAAAGACACAATTACAGGCCAAATTAGGGCAGCAAACAAGAGTCTAGGGGAAGAAGATAATGCGGGGGGTAAAATAGGTAGTTCGAGGCTGAAATTTGTGGATCATCAGCTTGGACAGCAAAGAGCTCTTCAGCAACTGGGAATGATCCAGCAGAACGCTTGGAGACCCCAAAGAGGCCTACCTGAACGCTCTGTCTCTGTCCTTCGCGCTTGGCTTTTCGAACACTTTCTCCACCCTTATCCAAAGGATTCGGATAAGCAAATGCTGGCCAAGCAAACAGGGCTTACGAGGAGCCAGGTTTCTAATTGGTTTATAAACGCACGAGTTCGTCTATGGAAGCCCATGGTAGAAGAAATGTATACGGAGGAAACCCAGGAGCAAGAACGGATTGGTTGTGCAGAAACCATCAACAAAATCAAAGAAAACACACCTCCCAACTCCATTTCTCCGACAGGAAAAGCTCCTCCAATTCAAAATCTTCCTCCAAGTTCCCATTCTACAGACGAACTTTCTACACTCACACCCTCTAAATCCTCCATGGGAGGAAACGTTGGAAACTCATCCGCATTGAGGCTCCCCAGGCCGTCGAAGCTTGGATCAAGTCCTAAAAGACCGAAGAACTCCGAAATGATAATGAATTTTTCATCCAACTTCATCAACGGAAAGCAAGCTCAATCGAACCCCAAGAACAGTGCGGTGAAAGTAGCCGACGGGAAGCCAAGCCGAGATGAATACTCATTTCCGATGAACCAAACTGATTTTGCAGGCGGATTTGTAGAGTATCCAATCGGTCAAATAGGCCGATACAATAACGAGCAATACACGACTCGTTTTTCCGGCAATGGCGTCTCCCTCACTCTCGGGCTCCCCCACCATAATTTTCTTCCGAACCACCAACCAATCCATTTGGGAGGACGAATCGACATCAGCGAACCAAACGAGTTTGCCGGAATAAACTCTCCAACTCCTCATGCCGCCACTGCTTTCGACAACATCGATATTCAGAACAGAAAACGATTTGTCGCACAATTGTTGCCGGATTTCGTGGCCTAA | 1989 | 48.67 | MATYFQGNSEIQAPDGLQTLVLMNPGDVQFSDSLPPPPTNIGFFSSGAGNSLTSQNLHHAPPSQCPQFAGIPLPVSLSPTSKEPSSHPTHPHHLSASHGLIPQAKFNHWNPINSPGARQSQRTTQGLSLSLSSQQPGYGSQRTGRETSSPAQHAVSGERIRIAGASSVSGNTNDVSGVHGVLLSSKYLKAAQDLLEEVVNLDIDETKNESPRKPNGTKLTEEPSMTATENGSDGAEEARKDSPQLSTAERQDIQRKKTKFISMLDEVEQRYKQYHHQMLIVISSFEQATGMGSARSYTSLALRTISKQFRCLKDTITGQIRAANKSLGEEDNAGGKIGSSRLKFVDHQLGQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEETQEQERIGCAETINKIKENTPPNSISPTGKAPPIQNLPPSSHSTDELSTLTPSKSSMGGNVGNSSALRLPRPSKLGSSPKRPKNSEMIMNFSSNFINGKQAQSNPKNSAVKVADGKPSRDEYSFPMNQTDFAGGFVEYPIGQIGRYNNEQYTTRFSGNGVSLTLGLPHHNFLPNHQPIHLGGRIDISEPNEFAGINSPTPHAATAFDNIDIQNRKRFVAQLLPDFVA | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1167298 | 1169664 | + | Bma003753.1 | Bma10g00129 | 89192 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma10g00129 | 662 | SMART | prehox3 | 176 | 318 | IPR006563 | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 53 | 158 | - | - | |
Bma10g00129 | 662 | SMART | HOX_1 | 366 | 430 | IPR001356 | GO:0003677 | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 470 | 506 | - | - | |
Bma10g00129 | 662 | CDD | homeodomain | 366 | 427 | IPR001356 | GO:0003677 | |
Bma10g00129 | 662 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 6 | 614 | - | - | |
Bma10g00129 | 662 | SUPERFAMILY | Homeodomain-like | 367 | 433 | IPR009057 | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 205 | 252 | - | - | |
Bma10g00129 | 662 | Pfam | Homeobox KN domain | 383 | 422 | IPR008422 | GO:0003677|GO:0006355 | |
Bma10g00129 | 662 | Pfam | Associated with HOX | 181 | 317 | IPR006563 | - | |
Bma10g00129 | 662 | Gene3D | - | 369 | 445 | - | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 532 | 551 | - | - | |
Bma10g00129 | 662 | ProSiteProfiles | 'Homeobox' domain profile. | 363 | 426 | IPR001356 | GO:0003677 | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 452 | 520 | - | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 217 | 231 | - | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 107 | 154 | - | - | |
Bma10g00129 | 662 | MobiDBLite | consensus disorder prediction | 233 | 252 | - | - | |
Bma10g00129 | 662 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 5 | 6 | 614 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g02011 | Bma10g00129 | CCT | |
Bma04g00527 | Bma10g00129 | CCT | |
Bma04g01538 | Bma10g00129 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00927 | Bma-Chr1:9069693 | Bma10g00129 | Bma-Chr10:1167298 | 5.90E-47 | dispersed | |
Bma05g00135 | Bma-Chr5:4158704 | Bma10g00129 | Bma-Chr10:1167298 | 2.08E-66 | dispersed | |
Bma07g01658 | Bma-Chr7:52164392 | Bma10g00129 | Bma-Chr10:1167298 | 2.73E-79 | dispersed | |
Bma09g00348 | Bma-Chr9:30200720 | Bma10g00129 | Bma-Chr10:1167298 | 7.31E-70 | dispersed | |
Bma10g00129 | Bma-Chr10:1167298 | Bma14g00602 | Bma-Chr14:6539299 | 8.98E-80 | dispersed | |
Bma01g02011 | Bma-Chr1:74608352 | Bma10g00129 | Bma-Chr10:1167298 | 0 | wgd | |
Bma10g00129 | Bma-Chr10:1167298 | Bma04g01538 | Bma-Chr4:51436269 | 0 | wgd | |
Bma10g00129 | Bma-Chr10:1167298 | Bma04g00527 | Bma-Chr4:4641565 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57899 | PF07526 | POX | 4.50E-47 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma10g00129 | - | - | zju:107405648 | 695.271 |