Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00129 ATGGCGACGTACTTTCAGGGTAATTCAGAAATCCAAGCTCCAGATGGATTACAGACGCTAGTACTTATGAATCCTGGAGACGTACAGTTCTCCGATTCCCTTCCGCCGCCTCCGACCAACATCGGATTCTTCAGTTCTGGCGCCGGAAATTCTTTAACTTCTCAGAATCTTCACCACGCGCCACCATCCCAATGCCCGCAATTCGCCGGGATTCCTTTGCCGGTTTCTCTTTCCCCTACTTCAAAAGAACCTAGTTCTCATCCCACACATCCCCACCATTTGTCCGCCTCGCATGGACTCATCCCCCAAGCCAAATTCAATCACTGGAATCCGATCAACTCCCCAGGCGCGCGTCAATCTCAACGCACTACACAAGGCCTTTCCCTCAGCCTCTCCTCTCAGCAGCCCGGTTATGGGTCTCAACGAACCGGACGAGAAACCTCATCCCCAGCTCAGCACGCAGTTTCCGGCGAGAGAATTCGGATTGCCGGTGCGTCATCGGTTTCCGGTAATACCAACGACGTTTCAGGTGTACATGGTGTGTTGCTGAGCTCAAAGTACTTGAAAGCGGCCCAAGATCTCCTCGAAGAAGTCGTAAATCTAGACATCGATGAAACTAAGAATGAATCACCGAGAAAACCTAACGGCACTAAGCTCACCGAAGAGCCATCTATGACGGCAACCGAAAATGGCTCAGACGGAGCAGAAGAAGCTCGGAAAGACAGTCCACAGCTTTCAACAGCCGAGAGACAGGACATTCAGAGAAAGAAGACAAAGTTTATCAGTATGCTTGATGAGGTGGAGCAAAGGTACAAACAATACCATCATCAGATGCTGATCGTGATATCGTCGTTCGAACAAGCGACTGGAATGGGATCGGCAAGATCGTACACATCCCTCGCTCTCAGAACAATTTCGAAGCAATTCCGGTGCTTGAAAGACACAATTACAGGCCAAATTAGGGCAGCAAACAAGAGTCTAGGGGAAGAAGATAATGCGGGGGGTAAAATAGGTAGTTCGAGGCTGAAATTTGTGGATCATCAGCTTGGACAGCAAAGAGCTCTTCAGCAACTGGGAATGATCCAGCAGAACGCTTGGAGACCCCAAAGAGGCCTACCTGAACGCTCTGTCTCTGTCCTTCGCGCTTGGCTTTTCGAACACTTTCTCCACCCTTATCCAAAGGATTCGGATAAGCAAATGCTGGCCAAGCAAACAGGGCTTACGAGGAGCCAGGTTTCTAATTGGTTTATAAACGCACGAGTTCGTCTATGGAAGCCCATGGTAGAAGAAATGTATACGGAGGAAACCCAGGAGCAAGAACGGATTGGTTGTGCAGAAACCATCAACAAAATCAAAGAAAACACACCTCCCAACTCCATTTCTCCGACAGGAAAAGCTCCTCCAATTCAAAATCTTCCTCCAAGTTCCCATTCTACAGACGAACTTTCTACACTCACACCCTCTAAATCCTCCATGGGAGGAAACGTTGGAAACTCATCCGCATTGAGGCTCCCCAGGCCGTCGAAGCTTGGATCAAGTCCTAAAAGACCGAAGAACTCCGAAATGATAATGAATTTTTCATCCAACTTCATCAACGGAAAGCAAGCTCAATCGAACCCCAAGAACAGTGCGGTGAAAGTAGCCGACGGGAAGCCAAGCCGAGATGAATACTCATTTCCGATGAACCAAACTGATTTTGCAGGCGGATTTGTAGAGTATCCAATCGGTCAAATAGGCCGATACAATAACGAGCAATACACGACTCGTTTTTCCGGCAATGGCGTCTCCCTCACTCTCGGGCTCCCCCACCATAATTTTCTTCCGAACCACCAACCAATCCATTTGGGAGGACGAATCGACATCAGCGAACCAAACGAGTTTGCCGGAATAAACTCTCCAACTCCTCATGCCGCCACTGCTTTCGACAACATCGATATTCAGAACAGAAAACGATTTGTCGCACAATTGTTGCCGGATTTCGTGGCCTAA 1989 48.67 MATYFQGNSEIQAPDGLQTLVLMNPGDVQFSDSLPPPPTNIGFFSSGAGNSLTSQNLHHAPPSQCPQFAGIPLPVSLSPTSKEPSSHPTHPHHLSASHGLIPQAKFNHWNPINSPGARQSQRTTQGLSLSLSSQQPGYGSQRTGRETSSPAQHAVSGERIRIAGASSVSGNTNDVSGVHGVLLSSKYLKAAQDLLEEVVNLDIDETKNESPRKPNGTKLTEEPSMTATENGSDGAEEARKDSPQLSTAERQDIQRKKTKFISMLDEVEQRYKQYHHQMLIVISSFEQATGMGSARSYTSLALRTISKQFRCLKDTITGQIRAANKSLGEEDNAGGKIGSSRLKFVDHQLGQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEETQEQERIGCAETINKIKENTPPNSISPTGKAPPIQNLPPSSHSTDELSTLTPSKSSMGGNVGNSSALRLPRPSKLGSSPKRPKNSEMIMNFSSNFINGKQAQSNPKNSAVKVADGKPSRDEYSFPMNQTDFAGGFVEYPIGQIGRYNNEQYTTRFSGNGVSLTLGLPHHNFLPNHQPIHLGGRIDISEPNEFAGINSPTPHAATAFDNIDIQNRKRFVAQLLPDFVA 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1167298 1169664 + Bma003753.1 Bma10g00129 89192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00129 662 SMART prehox3 176 318 IPR006563 -
Bma10g00129 662 MobiDBLite consensus disorder prediction 53 158 - -
Bma10g00129 662 SMART HOX_1 366 430 IPR001356 GO:0003677
Bma10g00129 662 MobiDBLite consensus disorder prediction 470 506 - -
Bma10g00129 662 CDD homeodomain 366 427 IPR001356 GO:0003677
Bma10g00129 662 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 614 - -
Bma10g00129 662 SUPERFAMILY Homeodomain-like 367 433 IPR009057 -
Bma10g00129 662 MobiDBLite consensus disorder prediction 205 252 - -
Bma10g00129 662 Pfam Homeobox KN domain 383 422 IPR008422 GO:0003677|GO:0006355
Bma10g00129 662 Pfam Associated with HOX 181 317 IPR006563 -
Bma10g00129 662 Gene3D - 369 445 - -
Bma10g00129 662 MobiDBLite consensus disorder prediction 532 551 - -
Bma10g00129 662 ProSiteProfiles 'Homeobox' domain profile. 363 426 IPR001356 GO:0003677
Bma10g00129 662 MobiDBLite consensus disorder prediction 452 520 - -
Bma10g00129 662 MobiDBLite consensus disorder prediction 217 231 - -
Bma10g00129 662 MobiDBLite consensus disorder prediction 107 154 - -
Bma10g00129 662 MobiDBLite consensus disorder prediction 233 252 - -
Bma10g00129 662 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 614 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02011 Bma10g00129 CCT
Bma04g00527 Bma10g00129 CCT
Bma04g01538 Bma10g00129 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00927 Bma-Chr1:9069693 Bma10g00129 Bma-Chr10:1167298 5.90E-47 dispersed
Bma05g00135 Bma-Chr5:4158704 Bma10g00129 Bma-Chr10:1167298 2.08E-66 dispersed
Bma07g01658 Bma-Chr7:52164392 Bma10g00129 Bma-Chr10:1167298 2.73E-79 dispersed
Bma09g00348 Bma-Chr9:30200720 Bma10g00129 Bma-Chr10:1167298 7.31E-70 dispersed
Bma10g00129 Bma-Chr10:1167298 Bma14g00602 Bma-Chr14:6539299 8.98E-80 dispersed
Bma01g02011 Bma-Chr1:74608352 Bma10g00129 Bma-Chr10:1167298 0 wgd
Bma10g00129 Bma-Chr10:1167298 Bma04g01538 Bma-Chr4:51436269 0 wgd
Bma10g00129 Bma-Chr10:1167298 Bma04g00527 Bma-Chr4:4641565 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57899 PF07526 POX 4.50E-47 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00129 - - zju:107405648 695.271