Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00174 ATGGAAGCGATGCAAATAGATTCGGAGCAAAATCTTCAGCGACTGCAATCTTCGTACAGATCCTTGGACGAGAAATATGATATTCAGAAGGAGGAGTACAGGGGTCAGCAGTACAGTCAGATTTACTTTGCGCGTCTCCAGCTTATGAGAGCGCTCCTTTCTTCCCTTGTTTTTAACTGGAAACCCCATCTTCCTGTCTGCACTGTGCTGGAGTTGGAAGCTGGCAAGGAATGTATCATAGTTGGAACCATTTACAAGCACATGAAACTCAAGCCCACAATTCTGCACGAGTATTCAAAAGAGAGATCAGTCACTCCATTAGTTAAGCCACATAACTTTATGCACCCTGATGATCAACTAGTTTTGGAAGATGAAAGTGGAAGAGTGAAGCTTTCTGGAACTATGATTTCACCATCGACATTTGTAACAGCAGGGATTGTTGTTGCTTTGCATGGAAAGGAAACTTCTGCTGGTGACTTTTTGGTGTTAGATGTCTTAGAATCCGGACTACCATCTCAGATAGAAATGCCTCATACGTTAAGGGAAGACAAGTATGTTGTCATTGTGTCAGGGCTAAGCATTGGTAGTAGCACTTCTAACCCCTTGCAGTTTCAGCTTCTTGTTGATTATTTAACTGGGCATTTAGGGGATGAGAAGGAACAAGGTATTGCATCAAAAATAGTTCGGCTTGTAATTGCTGGAAATTCTGTTGAAATATCTCGTGGGCTTCTTAATGGACAGAATTTGGCTAGTAAAGATCAGTCAAGGCTGTCTGAGCCTATCACCGAACTGGATATCTTGTTGACTCAGCTTGTTGCTGGTTTACCTGTGGACATCATGCCTGGTGCAAGTGATCCGACCAACTTTTCTTTACCTCAGCAGCCACTGCATAAATGCCTTTTCCCTGGATCGTCAGCTTATAACACTTTCAGATCCTGTACAAATCCTCATTCCTTCGAGATTGATAATATCAGGTTTCTTGGAACATCAGGTCAGAACATAGACGATCTGGCAAAATACTCAGTGGCAAAGGATAAAGTTGAATTTATGGAGATGACATTGAAATGGAGGCATCTGGCTCCCACTGCTCCAAATACTCTTGGCTGTTATCCTTTCACGGATAAGGATCCTTTCCTGATTGAGGATTGTCCTCATGTTTATTTCGTTGGTAATCAAGATACCTATGATACTCGCCTAATTGAAGGGCATGAGGGTCAGATGGTCAGACTCATTTGTGTTCCAAAATTCTGCGAAACAGGCATTGCTGTTATGGTAAACTTACGAAATCTCGAATGCCGTACTCTCGGTTTTCAGATCGATTTCAGCTAG 1329 42.44 MEAMQIDSEQNLQRLQSSYRSLDEKYDIQKEEYRGQQYSQIYFARLQLMRALLSSLVFNWKPHLPVCTVLELEAGKECIIVGTIYKHMKLKPTILHEYSKERSVTPLVKPHNFMHPDDQLVLEDESGRVKLSGTMISPSTFVTAGIVVALHGKETSAGDFLVLDVLESGLPSQIEMPHTLREDKYVVIVSGLSIGSSTSNPLQFQLLVDYLTGHLGDEKEQGIASKIVRLVIAGNSVEISRGLLNGQNLASKDQSRLSEPITELDILLTQLVAGLPVDIMPGASDPTNFSLPQQPLHKCLFPGSSAYNTFRSCTNPHSFEIDNIRFLGTSGQNIDDLAKYSVAKDKVEFMEMTLKWRHLAPTAPNTLGCYPFTDKDPFLIEDCPHVYFVGNQDTYDTRLIEGHEGQMVRLICVPKFCETGIAVMVNLRNLECRTLGFQIDFS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1607616 1611628 - Bma003803.1 Bma10g00174 89237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00174 442 CDD MPP_PolD2_C 185 437 IPR041863 -
Bma10g00174 442 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 8 438 IPR024826 -
Bma10g00174 442 Coils Coil 12 32 - -
Bma10g00174 442 Pfam DNA polymerase delta subunit OB-fold domain 37 165 IPR040663 -
Bma10g00174 442 Gene3D - 174 441 - -
Bma10g00174 442 Gene3D - 44 168 - -
Bma10g00174 442 Pfam DNA polymerase alpha/epsilon subunit B 186 395 IPR007185 GO:0003677|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00174 K02328 - vvi:100241865 723.391