Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00217 ATGGAGAAGTATTTGAAGGAGTTCGAGGTGGAGCCTAAGCATTCCTCCGAGGAAGTTTTGAGGAAGTGGAGGTCCGCCGTATCGGTCGTAAAAAATCCTGCGCGAAGGTTTCGGAACGTTGCGGATCTAGTCAAGCGCTCGGAGGCTGCGAAGAAAAAATTAATGATTCAGGAAAAAATTCGAGTAGCACTTATTGTACAGAAAGCAGCCTTGCAGTTCATTGATGCGGGTGGTCAAGCTGAATACATTCTCTCAGAGGAGACTAGAGAACATGGTGGAATTGAAGGGATTGCTAGGAAAGTCTCTGTTTCTTTGAATACAGGTGTTAATGAGCAGGATGTACCTTTACGACAGAAAATTTATGGCCTTAACCGCTATACAGAAAAACCTTCAAAACCATTTTTAAAGTTTTTTCTGGAAGCACTGCAGGACGTAACACTTATCATCCTCATGGTCTGTGCGGTAGTTTCCTTAGGCGTTGGAATTGGCACAGAAGGATTGCCAAAGGGAATGTACCTTAAGATTGAGCCATTCAATTCTGTTAGGAAGAAGATGTCAGTGCTCGTGGCCCTTCCTGATGGCGGAAGACGAGCTTTTTGCAAAGGGGCATCAGAAATAATATTAAGAATGTGTGACAAGATTGTTGATGGCAATGGACCTACTGTTCCTTTACCGAAAGAACTGGTACGAACTGTGGCAGAAGCAATCAATGGTTTTGCTTCTGAAGCATTAAGAACCCTTTGTTTGGCTTTCCAAGATATAGATGGAAACTCATTTCCAGAGAGTGGCTTCACATTGGTGGCTGTTGTTGGAATCAAGGACCCTGTACGACCTGGAGTCAAGGATGCTGTCAAAACTTGTTTGGATGCTGGAATAACTGTTCGAATGGTCACGGGTGACAATATACATACAGCTAAAGCCATAGCTAAAGAATGTGGTATCCTTACACCTACTGGTTTGGCCATAGAAGGACCAGATTTTCGTAGCTTGTCTCCTGACCAGATGAGGGAAATTATCCCAAGACTCCAGGTCATGGCTCGATCATTGCCGTTGGACAAGTATACCTTGGTCACCAATCTGAGAAAAACATTTGGCGAGGTTGTTGCAGTGACAGGGGATGGGACAAATGATGCTCCGGCCTTGCATGAGTCAGATATTGGATTGGCTATGGGCATTGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTTATCATAATGGATGATAATTTTTCGACTATAGTGAATGTAGCCAAATGGGGACGTTCAGTGTATATAAACATACAAAAGTTCGTGCAGTTTCAGCTAACAGTCAACATTGTTGCCCTGGTGACCAATTTTGTTTCTGCGTGCCTTTCCGGATCTGCTCCTCTTACTGCTGTGCAGTTGCTGTGGGTCAACTTAATCATGGACACTCTTGGTGCATTGGCACTTGCTACGGAGCCTCCTGATGATACATTAATGAAAAGACGCCCTGTAACTAAGGGTATGAGTTTCATTACCAAAGCAATGTGGAGGAACATTATTGGCCAAAGCATTTATCAACTAGCTGTTCTTTTTGTTCTTAATTTTGCTGGGAAGCGGATTCTACGGCTTGATGGCTTTGGCGCCACTGATGTTCTGAATACTTTGATTTTCAACGCATTCGTCTTTTGTCAGGTGTTTAACGAAATAAACAGTCGCAAAATAGAGAAGATCAACATCTTCCGTGGCTTGTTTAGCAGCTGGATATTTATTACTATCGTCGTTTCAACGGCTGTTTTTCAAGTGATAATTGTTGAATTTTTGGGTGATTTTGCCAGCACTGTACCACTCGGTTGGAAATTTTGGGTGCTGAGTATTGTGATTGGATTTGTTAGCATGCCGATTGCAGTAGTTTTGAAGTGCATTCCCGTTGAAAGAAATTCAACCAAGCATCATGATGGCTATGAAGCACTGCCTTCCGGTCCAGAACTGGCATGA 1962 43.27 MEKYLKEFEVEPKHSSEEVLRKWRSAVSVVKNPARRFRNVADLVKRSEAAKKKLMIQEKIRVALIVQKAALQFIDAGGQAEYILSEETREHGGIEGIARKVSVSLNTGVNEQDVPLRQKIYGLNRYTEKPSKPFLKFFLEALQDVTLIILMVCAVVSLGVGIGTEGLPKGMYLKIEPFNSVRKKMSVLVALPDGGRRAFCKGASEIILRMCDKIVDGNGPTVPLPKELVRTVAEAINGFASEALRTLCLAFQDIDGNSFPESGFTLVAVVGIKDPVRPGVKDAVKTCLDAGITVRMVTGDNIHTAKAIAKECGILTPTGLAIEGPDFRSLSPDQMREIIPRLQVMARSLPLDKYTLVTNLRKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVAKWGRSVYINIQKFVQFQLTVNIVALVTNFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPDDTLMKRRPVTKGMSFITKAMWRNIIGQSIYQLAVLFVLNFAGKRILRLDGFGATDVLNTLIFNAFVFCQVFNEINSRKIEKINIFRGLFSSWIFITIVVSTAVFQVIIVEFLGDFASTVPLGWKFWVLSIVIGFVSMPIAVVLKCIPVERNSTKHHDGYEALPSGPELA 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1981509 1990357 + Bma003847.1 Bma10g00217 89280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00217 653 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Bma10g00217 653 PRINTS P-type cation-transporting ATPase superfamily signature 290 300 - -
Bma10g00217 653 PRINTS P-type cation-transporting ATPase superfamily signature 371 390 - -
Bma10g00217 653 PRINTS P-type cation-transporting ATPase superfamily signature 395 407 - -
Bma10g00217 653 PRINTS P-type cation-transporting ATPase superfamily signature 268 279 - -
Bma10g00217 653 PANTHER CATION TRANSPORTING ATPASE 173 639 - -
Bma10g00217 653 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 173 633 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bma10g00217 653 PANTHER CALCIUM-TRANSPORTING ATPASE 173 639 - -
Bma10g00217 653 Pfam haloacid dehalogenase-like hydrolase 198 384 - -
Bma10g00217 653 Pfam Cation transporting ATPase, C-terminus 456 629 IPR006068 -
Bma10g00217 653 PANTHER CALCIUM-TRANSPORTING ATPASE 6 172 - -
Bma10g00217 653 Gene3D - 177 275 IPR023299 GO:0000166
Bma10g00217 653 SMART Cation_ATPase_N_a_2 90 162 IPR004014 -
Bma10g00217 653 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 169 IPR023298 -
Bma10g00217 653 Pfam Cation transporter/ATPase, N-terminus 91 157 IPR004014 -
Bma10g00217 653 Gene3D - 417 630 - -
Bma10g00217 653 Gene3D - 276 416 IPR023214 -
Bma10g00217 653 Gene3D - 15 76 - -
Bma10g00217 653 PANTHER CATION TRANSPORTING ATPASE 6 172 - -
Bma10g00217 653 SUPERFAMILY HAD-like 265 476 IPR036412 -
Bma10g00217 653 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 337 459 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00217 653 SUPERFAMILY Calcium ATPase, transmembrane domain M 421 633 IPR023298 -
Bma10g00217 653 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 172 280 IPR023299 GO:0000166
Bma10g00217 653 PRINTS H+-transporting ATPase (proton pump) signature 371 387 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00217 653 PRINTS H+-transporting ATPase (proton pump) signature 403 428 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma10g00217 653 PRINTS H+-transporting ATPase (proton pump) signature 232 250 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00217 Bma-Chr10:1981509 Bma13g01184 Bma-Chr13:45120643 8.19E-15 dispersed
Bma10g00217 Bma-Chr10:1981509 Bma06g00346 Bma-Chr6:7696879 9.00E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00217 K01537 - nnu:104613476 776.548