Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00231 ATGGGTTTTGTTGCTGAATCTCAGTTTCATGTTTTGGCTGTGGACGACAGTCTCATCGATAGAAAACTGATTGAGAGGCTGCTCAAGACTTCGTCCTTTCGAGTTACGACTGTTGATTCTGGTTCTAAGGCTTTGGAATTTCTGGGTTTTAATCACGATGATAAAACCCACGCAATTGCATCTTCAATTTCTCCGCATAATCAGAAGGAAGTGGAAGTGAATCTTATAATCACAGATTATTGTATGCCTGGAATGACAGGCTACGATTTGCTCAAGAAAATCAAGGAATCTTCATCCTTGAGAAACATACCAGTCGTCGTAATGTCGTCTGAGAATGTACCTTCCAGAATCACCAGATGTTTAGAAGAAGGAGCAGAAGAATTTTTCTTGAAGCCAATGAGACTTTCAGACGTGAACCGGCTCCAACCCCACATGATGAAGACTAAGTTGAAGGAGCATCAAAAGCAAGAAAATGATGCACAAAAACAGGCGAATAATAAGAGGAAGGCCATGGAAGAAGGCCTTTCCCCTGATAGAACTAGACCCAGATTCAATGGCGTTGCCACTGTGATCTGA 576 42.01 MGFVAESQFHVLAVDDSLIDRKLIERLLKTSSFRVTTVDSGSKALEFLGFNHDDKTHAIASSISPHNQKEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVVMSSENVPSRITRCLEEGAEEFFLKPMRLSDVNRLQPHMMKTKLKEHQKQENDAQKQANNKRKAMEEGLSPDRTRPRFNGVATVI 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2091556 2093180 - Bma003862.1 Bma10g00231 89294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00231 191 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Bma10g00231 191 Gene3D - 10 186 - -
Bma10g00231 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR 152 187 IPR045279 GO:0009736
Bma10g00231 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 159 IPR045279 GO:0009736
Bma10g00231 191 CDD REC_typeA_ARR 11 141 - -
Bma10g00231 191 SMART REC_2 9 142 IPR001789 GO:0000160
Bma10g00231 191 MobiDBLite consensus disorder prediction 149 191 - -
Bma10g00231 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 152 187 - -
Bma10g00231 191 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 4 159 - -
Bma10g00231 191 MobiDBLite consensus disorder prediction 149 179 - -
Bma10g00231 191 SUPERFAMILY CheY-like 8 146 IPR011006 -
Bma10g00231 191 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Bma10g00231 191 Coils Coil 150 173 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01468 Bma10g00231 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00231 Bma-Chr10:2091556 Bma14g01751 Bma-Chr14:37731854 3.19E-57 dispersed
Bma01g02073 Bma-Chr1:76164242 Bma10g00231 Bma-Chr10:2091556 4.03E-59 transposed
Bma03g00432 Bma-Chr3:3287956 Bma10g00231 Bma-Chr10:2091556 4.32E-40 transposed
Bma10g00231 Bma-Chr10:2091556 Bma04g01468 Bma-Chr4:50428558 6.78E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57909 PF00072 Response_reg 2.40E-19 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00231 K14492 - csin:114257186 300.056