Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00237 ATGCTTTACTTTCTTATATCCTGCCTCCCCTTCATCGTTCTTTCAAAATCATTCTTCCACAAGTCAGTTCCAGCGTGGGAGGGCAAGAAAATAGTGTTTTCGGCTTCGTTTTGGGAGGAGTTAACTAGATTTGTTGCATCATGGAACTGGAAAAGTAGGGTTGCTTGTAGTTTCATCCGGGTTCCTACGATGACAATGCCTGCGAAGAAATTGAATTTTACTGAAGTGAATGAGAAAGTGGAGAATTCACTCTTGGATTTGCCTGAATTGGCTTTAGATTGCATTCTTGAGCAGCTTTCACCAGCCGAATTGTGTAGATTAGCTGAAGTCTGTAGCTCATTAAGAGATAGATGTCGAAGTGATCATTTGTGGGAGAAACACATGAAGCAGAAATGGGGTTCTGTGATCGGAGATTATGCTAATCGAGAATGGCATTTGCATAAAGCCTCAACTACTAGGCCAGCCGTCGTAAATATAAGCGAAAGGAAGTGCTCGGAGGAGAATTTTCTCAACAATTGGCTTTTTTGTTGGATTAAACCAAGAGAAGATAACAAGCCAACCACTGCCTTACCAATAGATTCCATTAAAGCTTGGTATCTCTCTCTTGAAAGTGGCAGGATTTGGTTTCCTGCTCAAGTTTATAACAGAGAGAATGGTCTTGCCGGTTTCGCATTGTCATGTTACGATGCACGGCTGTGCTATGATTCGGACAGTGATTCCTTCGTGGCAAGATATTCGTCTTATGGAAGACGAAGAGCGGAGGAAAATATCGAGTGGGAAAGATTACGAGCAGCACCAATCGATACTTCTTCGCACAAACTACATGCTTCTGATTGCTTAAATGACTTACAACCTGGGGATCATATTGAGATTCAATGGAGGAGAAACAAAGAATTTCCTTATGGATGGTGGTACAGCGTAGTTGGTCACTTGGAAACGTGTTATGGGGACGGCCGTCACTGCCATTGCAATGACAACATGGTGATTTTGGAGTTCAATCAGTATGCTCCCGGCTCTCGATGGAGAACAATGGCGATAAATCGGAAAGATCATCGAGAAAAAGGGAACGAAGAAGAAGGATTTTACGGAGGAATAAGAAAGCTTTACAAAGAGGAGGAGATCAAGATGTGGAAGCATCTATGGGCCACTCTAAATTTGTGA 1161 42.55 MLYFLISCLPFIVLSKSFFHKSVPAWEGKKIVFSASFWEELTRFVASWNWKSRVACSFIRVPTMTMPAKKLNFTEVNEKVENSLLDLPELALDCILEQLSPAELCRLAEVCSSLRDRCRSDHLWEKHMKQKWGSVIGDYANREWHLHKASTTRPAVVNISERKCSEENFLNNWLFCWIKPREDNKPTTALPIDSIKAWYLSLESGRIWFPAQVYNRENGLAGFALSCYDARLCYDSDSDSFVARYSSYGRRRAEENIEWERLRAAPIDTSSHKLHASDCLNDLQPGDHIEIQWRRNKEFPYGWWYSVVGHLETCYGDGRHCHCNDNMVILEFNQYAPGSRWRTMAINRKDHREKGNEEEGFYGGIRKLYKEEEIKMWKHLWATLNL 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2169557 2171635 + Bma003869.1 Bma10g00237 89300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00237 386 PANTHER F-BOX-LIKE PROTEIN 1 383 - -
Bma10g00237 386 Gene3D - 72 173 - -
Bma10g00237 386 SMART fbox_2 87 127 IPR001810 GO:0005515
Bma10g00237 386 Pfam F-box domain 84 126 IPR001810 GO:0005515
Bma10g00237 386 PANTHER ESTS AU081301(E20138) 1 383 - -
Bma10g00237 386 ProSiteProfiles F-box domain profile. 81 127 IPR001810 GO:0005515
Bma10g00237 386 SUPERFAMILY F-box domain 81 135 IPR036047 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01942 Bma10g00237 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00287 Bma-Chr7:3543799 Bma10g00237 Bma-Chr10:2169557 4.85E-124 dispersed
Bma10g00237 Bma-Chr10:2169557 Bma11g00310 Bma-Chr11:2899433 5.41E-142 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00237 - - qsu:112001672 486.108