Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma10g00246 ATGGCTATTCCACTTGTTCTTCTCTCTTTTCTCGTTATTGTTTTCCTCACTAACCGGGTCTATCAACGGCTCCGATTCAAGCTCCCGCCAGGTCCTCAGCCATGGCCGATTGTCGGAAACCTCTACGACGTGAAGCCGGTGAGGTTCCGGTGCTACGACGAGTGGTCTAAGAGGTACGGACCGATTATTTCCGTCTGGCTCGGTTCGAGTTTGCATGTGATAGTTTCGAACGTAGAGTTGGCGAAGGAAGTGCTGAAGGAACACGACCATCAGCTTGCTGATAGGCATCGACATAGAAATGCAGCTCAGTTCAGTAGAAATGGAGCAGATCTTATATGGGCTGACTATGGTCCCCATTATGTCAAAGTGAGGAAGCTCTGTAATATTGAGCTTTTTTGTGCAAAGAGACTTGAAGCTCTTCGACCCATTAGAGAAGATGAGAATTCGGCCATGGTTAAGTCGATTTTCAAGTACTTCATTAAACATGGTGACTTCTTTTTCTCTCTCATACTTGATAGTAATGAGGGTAAGAGCTTAATAATAAGAAAGTATTTGGGGTCAGTGTCGCTAAACAACATAACAAGGCTAGCATTCGGAAAGAGATTTGAGGATTCTGATGGAAAAATTAATGAATATGGAAAGGAATTTGAAGCAATTAGTGAGATTGGAAGGAAGCTGGGTTCATCTCTTACTGTGGCTGAGCATATCCCGTGGCTCCGATGGATGTTTCCACTCGAGAAGGAGGTGTTCGACAAGCACGGGGCTCGCCGAGATCGGTTCACAACATCAATACTCAAGGAGCACGATCTAGCCCGTCAATCGAGCGGAAACTCAAAGCAACACTTTGTGGATGCATTGCTTTCTTTGAAGGGTGCATATGAGCTTAGTGAAGATAACGTTATTGGCCTCCTGTGGGACATGATTGCTGCTGGGAAGGACACAACTGCAATTTCCGTTGAATGGGCCTTAGCTGAGCTAATCAAAAACCCGAGAATCCAACGAAAGGCCCAGGAGGAGCTCGACCGGGTTATTGGATTAGAACGAGTCATGACCGAAGTTGATTTTCCGAACCTACCTTATTTACAATGCATTGCCAAAGAAGCACTCAGGCTACACCCCCCAACTCCATTAATGCTCCCTCACCAAGCCAGCGTCGCGATCAAAATCAAAGGGTACGACATTCCAAAGGGAACTATTGTTCATGTTAACGTTTGGGCTGTGGCTCGTGATCCAACAATCTGGAAAAATCCACTTGTATTTCGCCCGGAGAGATTCCTCGAAGAAGAGGTTGACATGAAGGGCCATGATTTTCGGCTTCTCCCTTTCGGTTCCGGTCGCCGGGTCTGCCCCGGAGCCCAACTTGGAATCAATTTGGTGACTTCCATATTAGGGCATTTATTGCACCTTTTTGAATGGGCCCCGGCCCACGGGATGAAGGCGGAGGAGATGGATATGGAAGAAGGTCCGGGACTAGTTACCTACATGAGGACACCTTTACAAGCCCTCCCACCGGGGCCTTTCCCCTGGCCGATCGTCGGAAATCTTTACGACGTGAAGCCGGTGAGGTTCCGATGCTACCACGAGTGGACCAAAATCTATGGCCCCATCATATCCGTCTGGTTCGGCTCGAATTTGAACGTGATTGTATCGACTGCGGAGTTGGCGAAAGAAGTGCTCAAGGAGCGCGATCAGCAGCTGGCCGATCGACATCGGAGTAGATCGTCCGCTAAGTTTAGCAGAGATGGAACCGACCTAATCTGGGCTGACTATGGGCCGCATTACGTTAAGGTGAGGAAAGTTTGTACTATGGAGCTTTTCTCTCCCAAGAGGCTCGAAGCTCTTCGGCCTATCAGAGAAGATGAAGTGACCGCCATGGTTGAATCAATTTTCAAGGACTGCATCAGACCTGGGCAAAGTTTGCTGGTGAAAAAGTATTTAGGAAGAGTGGCATTCAACAACATAACAAGACTTGCATTTGGGAAAAGGTTTGTAAATGCAGAGGATATAATAGATGAGCAGGGAAAAGAATTCAAGGCAATTGTGGCCAATGGGCTCAAACTCGGTGCCTCTCTCAGTATAGCTGAGCACATCCCATGGCTACGGTGGATGTTCCCGTTAGAGGAAGGGGCATTTGCAAAACATGGCGCTCGCCGAGACAGACTCACTCGAGCCATCATCGAGGAGCACAATCAAGCTCGTGAAAAAACCGGTGCTTCTAAACAACACTTTGTGGACGCTTTGCTTACTCTTAAAGATAAATATGACCTCAGCGAGGATAATATTTATGGACTTCTCTGGGACATGATAACTGCTGGAATGGACACAACAGCAATCTCAGTAGAATGGGGCATGGCTGAGTTAATAAAGAACCCGAGTGTGCAACAAAAGGCTCAAGAGGAGCTAGACCGAGTTGTCGGGCTAGAAAGGGTTATGACAGAACTTGATATTCCAAACCTCCCTTACTTACAGTGCATCGCCAAGGAGGCATTAAGGCTACACCCTCCAACCCCTCTGATGCTTCCCCACCGATCAAACGACAACGTCAAACTCGGCGGCTACGACCTCCCCAAGGGCACCATAGTTCATGTCAACGTCTGGGCAGTAGCCCGTGACCCTGCTGACTGGAAAAACCCACTTGAATTTCGACCAGAAAGGTTCCTGGAAGAGGATGTTGACATGAAGGGTCATGATTTCCGTTTGCTCCCGTTCGGTGCCGGCCGGAGGGTCTGTCCCGGAGCTCAGTTGGGTATCAATTTGGTGACTTCCATGTTGGGTCACCTGTTGCACCACTTTGAATGGGCCCCGCCCAATGGAATTAAGGCTGAGGAGGTGGATATGGCGGAAAGTCCAGGGCTGGTGACCTACATGAGGACGCCTTTGCAGGCTGTTGCCACCCCAAGGTTACCTTCCCATTTGTACAAACGAATGACCGTCGATGGGTAA 2943 48.62 MAIPLVLLSFLVIVFLTNRVYQRLRFKLPPGPQPWPIVGNLYDVKPVRFRCYDEWSKRYGPIISVWLGSSLHVIVSNVELAKEVLKEHDHQLADRHRHRNAAQFSRNGADLIWADYGPHYVKVRKLCNIELFCAKRLEALRPIREDENSAMVKSIFKYFIKHGDFFFSLILDSNEGKSLIIRKYLGSVSLNNITRLAFGKRFEDSDGKINEYGKEFEAISEIGRKLGSSLTVAEHIPWLRWMFPLEKEVFDKHGARRDRFTTSILKEHDLARQSSGNSKQHFVDALLSLKGAYELSEDNVIGLLWDMIAAGKDTTAISVEWALAELIKNPRIQRKAQEELDRVIGLERVMTEVDFPNLPYLQCIAKEALRLHPPTPLMLPHQASVAIKIKGYDIPKGTIVHVNVWAVARDPTIWKNPLVFRPERFLEEEVDMKGHDFRLLPFGSGRRVCPGAQLGINLVTSILGHLLHLFEWAPAHGMKAEEMDMEEGPGLVTYMRTPLQALPPGPFPWPIVGNLYDVKPVRFRCYHEWTKIYGPIISVWFGSNLNVIVSTAELAKEVLKERDQQLADRHRSRSSAKFSRDGTDLIWADYGPHYVKVRKVCTMELFSPKRLEALRPIREDEVTAMVESIFKDCIRPGQSLLVKKYLGRVAFNNITRLAFGKRFVNAEDIIDEQGKEFKAIVANGLKLGASLSIAEHIPWLRWMFPLEEGAFAKHGARRDRLTRAIIEEHNQAREKTGASKQHFVDALLTLKDKYDLSEDNIYGLLWDMITAGMDTTAISVEWGMAELIKNPSVQQKAQEELDRVVGLERVMTELDIPNLPYLQCIAKEALRLHPPTPLMLPHRSNDNVKLGGYDLPKGTIVHVNVWAVARDPADWKNPLEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWAPPNGIKAEEVDMAESPGLVTYMRTPLQAVATPRLPSHLYKRMTVDG 980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2272268 2278169 + Bma003878.2 Bma10g00246 89309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma10g00246 980 PANTHER CYTOCHROME P450 98A3 502 973 - -
Bma10g00246 980 PRINTS P450 superfamily signature 824 835 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS P450 superfamily signature 901 910 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 SUPERFAMILY Cytochrome P450 503 967 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Bma10g00246 980 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 900 910 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 823 841 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 910 933 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 864 888 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 501 - -
Bma10g00246 980 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 Gene3D Cytochrome P450 499 972 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 903 912 IPR017972 GO:0005506|GO:0016705
Bma10g00246 980 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 502 973 - -
Bma10g00246 980 PANTHER CYTOCHROME P450 98A3 5 501 - -
Bma10g00246 980 Pfam Cytochrome P450 29 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma10g00246 980 Pfam Cytochrome P450 503 943 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00037 Bma-Chr7:1296922 Bma10g00246 Bma-Chr10:2272268 3.72E-73 dispersed
Bma07g01388 Bma-Chr7:49632313 Bma10g00246 Bma-Chr10:2272268 1.43E-49 dispersed
Bma10g00246 Bma-Chr10:2272268 Bma14g00007 Bma-Chr14:76955 6.76E-79 dispersed
Bma11g00052 Bma-Chr11:627289 Bma10g00246 Bma-Chr10:2272268 2.89E-73 dispersed
Bma10g00246 Bma-Chr10:2272268 Bma12g01058 Bma-Chr12:42675774 1.20E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma10g00246 K09754 - jre:109019007 859.751